Epru014845.2
Basic Information
- Insect
- Eucera pruinosa
- Gene Symbol
- -
- Assembly
- GCA_028830335.1
- Location
- JAMYCR010000010.1:1638823-1642473[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-12 2.3e-09 37.6 0.0 1 39 382 421 382 425 0.90 2 4 3.1e-12 6.9e-09 36.1 0.1 2 39 437 474 436 477 0.94 3 4 1.1e-18 2.5e-15 56.7 0.0 2 45 492 536 491 536 0.97 4 4 1.3e-18 2.9e-15 56.5 0.1 1 42 543 585 543 586 0.97
Sequence Information
- Coding Sequence
- ATGAAACCGTATCCGTTCAAACGGCCCGTAAACATGGCGAGCCTTTACCCGAAATATGCAAACCCGTCGTCGCCGGTCCCACTTTCTTTGCGCGGGCTTTTTCACCTTTCCTATCTGATCTGCAACGCTCACGCCTTCTCTTCCGAAACCCTGTGGATCGCGAAGCTACTTTCATACGATGAAACGCCGCTAGAATTGAAAGACGGAAGCTTGGCTGATGGAACAAATGAATCTCGAGCCCTGTGTCTCCTGTGCATGTTACAGTCCCTGTTGAAAACAGCCGATCAGTTGAAGATCAAAGGACTCTGCGAGGTGCCGGAAAGCAGAGACGGTCCACCCTCGGTAAGCCTGAGCTCGCCGCCGAGAGAACCCGGCACGCCTAGGATAAATTTTACCAAGCTGAAGAGGCATCACCCGAGATACAAGAGAGCCAGAACCACGTTCGAGCCTCGCGCCACCGACTCCAGGCACTACGACCGATACAAAGAAGAGGAGTCGAACGAAAATTATAATCCGGAGAACAAAGAGAACCACAGAGACTGGCAAGCCGAAGATGAAGAGTGTACGGAGGCAACCACGGGAGCAGTAGTCTTGGAAACTTGCCAGCGGAACAGCAATACCAGTATCACTACCACCggcaacaacaacaataataataacaacaataattctAGCGGCAATAGCAACGGTAATAGCACGagcaacaacaataacaacgGTGACATGTTTTGTCATACAGGCCTCGGTCATTACGGTCATCACCCGGATCCCGGAGAAGTTGACCTACCTCCAGAGACTCAACCTACCCCACCTAGTGCCACGTTGGTCGGCACCACGATTACCCATCTAAGGGATCCGGACCATCACTCCACAGAGATCCAGAATTGCGACAGTGTAAAAATTAAGTTCGAAACGTTGCACACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCGGACCGGGCGAGCGTCAGTTCGAAGAACGCGGCCGACAGCGACAACATGATGATGATCACGCCGGAGTTGCTCGGATTGATGCCTTCTGGGAGTTCGGTTCACTCGGATTCCGGCGAGAACAATTCCAGAGGCCACTCGGGACAGTCCAGTTCGCATCATCACGGTTCAAAGTCGTGGACGCAAGAGGACATGGACGCCGCGTTGGAAGCTTTGCGAAACCACGACATGAGTCTAACGAAAGCCTCCGCAACGTTCGGTATCCCCTCGACGACGCTATGGCAAAGAGCGCACCGGCTCGGCATCGACACGCCGAAGAAAGACGGACCTACCAAATCGTGGAGCGACGAGAGCTTGAACAACGCGCTCGAAGCGTTGCGGACAGGAACGATATCGGCGAACAAAGCCTCGAAAGCGTTCGGCATTCCATCGAGCACGTTGTATAAAATCGCGAGGAGGGAAGGCATCAGGCTGGCCGCGCCTTTCAACGCGAGTCCCACCACTTGGTCACCCGCGGACCTCGATCGCGCCCTCGAAGCAATACGTTCCGGGCAGACGTCCGTGCAGAGAGCGTCCACGGAGTTTGGGATACCTACGGGAACGTTATATGGCCGATGCAAGCGAGAAGGAATCGAACTTAGCAGGAGTAACCCTACACCGTGGAGCGAAGACGCCATGACCGAAGCTCTCGAAGCTGTCAGATTAGGCCACATGAGCATTAATCAAGCGGCCATCCACTATAACTTACCGTACTCTTCCCTGTACGGTCGCTTCAAGAGAGGAAAATACGAGGAGCCGTCGGTGGGTGATATATCGCAAGACGGCAGCAGTCCCCACTTCCATCAAAGTCCAAGTCAGAATCATTCGTCCGCCGTTCCGGATCAAATGCCTTACCAAGGCAGCTGA
- Protein Sequence
- MKPYPFKRPVNMASLYPKYANPSSPVPLSLRGLFHLSYLICNAHAFSSETLWIAKLLSYDETPLELKDGSLADGTNESRALCLLCMLQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEESNENYNPENKENHRDWQAEDEECTEATTGAVVLETCQRNSNTSITTTGNNNNNNNNNNSSGNSNGNSTSNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPSVGDISQDGSSPHFHQSPSQNHSSAVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00306165;
- 80% Identity
- -