Basic Information

Insect: Megachile ligniseca
Gene Symbol: -
Assembly: GCA_945859565.1
Location: CAMAOB010000346.1:8875-13013[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.1e-12 1.6e-09 37.6 0.0 1 39 389 428 389 432 0.90

2 4 3.3e-12 5.1e-09 36.0 0.1 2 39 444 481 443 484 0.94

3 4 1.2e-18 1.8e-15 56.7 0.0 2 45 499 543 498 543 0.97

4 4 1.4e-18 2.1e-15 56.5 0.1 1 42 550 592 550 593 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.1e-12	1.6e-09	37.6	0.0	1	39	389	428	389	432	0.90
2	4	3.3e-12	5.1e-09	36.0	0.1	2	39	444	481	443	484	0.94
3	4	1.2e-18	1.8e-15	56.7	0.0	2	45	499	543	498	543	0.97
4	4	1.4e-18	2.1e-15	56.5	0.1	1	42	550	592	550	593	0.97

Sequence Information

Coding Sequence: ATGAAAGGAAGTGTGAAGGCGGCCGGGGGTGGAGAGAGAGGAGAGGAGAGGAGAGGAGACGAGAGGAGATGCACGAAGCAAGAGACAGGATGTACGTGGATAGAAACGGTTGGAAGTCATACCGGTGTCGGTACCGCCGCGAGTGCCGAGCAAAGAGAATCGGAGCATAGGTCGGAGGCAAATGAACAGGAGCGTAACGAGAACGAGAACGTGAACGAGAAGGAGATAAACTGGATCGTTTATATCGTATCGTTGCAGTCGTTGTTGAAAACGGCCGATCAGCTGAAGATCAAGGGACTCTGCGAGGTACCGGAAAGCAGAGACGGTCCACCCTCGGTTAGTCTCAGTTCGCCACCGAGGGAACCCGGTACTCCTAGAATAAATTTCACCAAACTGAAACGACATCATCCGAGATACAAGAGAGCCAGAACCAGCTTCGAGCCGCGAGCAACGGACTCGAGACACTACGACAGGTACAAAGAAGAGGAATCGAACGAAAATTACAATCGAGAGAACAAAGAGAACCACAGAGATTGGCAAGCCGACGATGAAGAGTGCACggaagcaacgaccgcagcagtagccttagaaacttgtcagcgcaacaataacaacaacatcaacattgccgataccagcaacaacaacaacaacaacaacaacaacaacaacaataacaacaacaacaacaataacggtagcaatagtagcaacggtaacgccgccaacaataacaacgGTGACATGTTTTGTCATACAGGACTCGGTCATTATGGTCACCATCCGGATCCTGGAGAGGTCGATCTGCCTCCAGAGACCCAACCCACGCCGCCGAGCGCCACGTTAGTCGGGACCACGATCACGCATCTCCGAGATCCGGACCATCATGCCACAGAGATCCAAAACTGTGACAGTGTAAAGATCAAGTTCGAAACGTTGCACACGATGGATTCGTCGGACACGATCGACATCGACAGCCATATGTCGGATCGGGCGAGCGTCAGTTCGAAGAACGCGACCGACAACGACAACATGATGATGATCACGCCGGAACTGCTCGGTTTAATGCCTTCCGGAAGCTCCGTTCACTCGGATTCCGGCGAAAATAACTCGAGGGGTCATTCCGGACAGTCTAGCTCCCACCATCACGGTTCCAAGTCGTGGACTCAAGAGGACATGGACGCCGCTCTGGAAGCGCTGCGAAATCACGACATGAGTCTGACGAAAGCCTCCGCGACATTCGGCATACCCTCGACGACGTTGTGGCAAAGAGCGCATCGACTGGGTATAGACACGCCGAAAAAGGACGGGCCGACCAAGTCTTGGAGCGACGAGAGTTTGAATAACGCGCTCGAAGCTCTGCGAACCGGAACGATCTCGGCCAACAAAGCGTCGAAGGCGTTCGGGATACCTTCCAGCACCTTGTACAAAATCGCCAGAAGAGAAGGCATTCGGCTGGCTGCGCCTTTCAACGCGAGTCCTACCACTTGGTCACCGGCCGATCTCGATCGCGCCCTCGAGGCGATCAGATCCGGCCAAACGTCCGTGCAAAGGGCGTCCACCGAATTCGGTATACCGACGGGAACCTTGTACGGCAGATGCAAGAGGGAGGGCATCGAACTCAGCAGGAGTAACCCTACACCCTGGAGCGAAGACGCCATGACCGAAGCTCTCGAGGCGGTCAGATTAGGACACATGAGCATCAATCAGGCGGCTATTCACTACAATCTACCGTATTCTTCTCTCTACGGACGTTTCAAGAGAGGAAAGTACGAAGAACCAGCCGTCGGAGACTTGTCGCAAGACGGCAGCAATCCTCATTTCCATCAGAGTCCGACTCAGAATCATTCGTCCGCCGTACCGGATCAGATGCCGTACCAGGGCAGCTGA
Protein Sequence: MKGSVKAAGGGERGEERRGDERRCTKQETGCTWIETVGSHTGVGTAASAEQRESEHRSEANEQERNENENVNEKEINWIVYIVSLQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTSFEPRATDSRHYDRYKEEESNENYNRENKENHRDWQADDEECTEATTAAVALETCQRNNNNNINIADTSNNNNNNNNNNNNNNNNNNNGSNSSNGNAANNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHATEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNATDNDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGDLSQDGSNPHFHQSPTQNHSSAVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00306165;
80% Identity: -