Basic Information

Insect: Ephialtes manifestator
Gene Symbol: -
Assembly: GCA_963970395.1
Location: OZ019970.1:16151778-16163243[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.8e-12 2.9e-09 37.9 0.0 1 39 295 334 295 338 0.90

2 4 5.5e-12 9e-09 36.3 0.1 2 39 350 387 349 390 0.94

3 4 2e-18 3.3e-15 56.9 0.0 2 45 405 449 404 449 0.97

4 4 2.4e-18 3.9e-15 56.7 0.0 1 42 456 498 456 499 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.8e-12	2.9e-09	37.9	0.0	1	39	295	334	295	338	0.90
2	4	5.5e-12	9e-09	36.3	0.1	2	39	350	387	349	390	0.94
3	4	2e-18	3.3e-15	56.9	0.0	2	45	405	449	404	449	0.97
4	4	2.4e-18	3.9e-15	56.7	0.0	1	42	456	498	456	499	0.97

Sequence Information

Coding Sequence: ATGTTATTTAGCGTCGATGCTCTGAGGATAATTCCTGCTAGAACGCACCTTCCCTCGTCTCTCTCGtccTTGCTGAAGACGGCAGATCAGCTGAAGATCAAGGGCCTCTGCGAGGTCCCGGAGAGCAGAGAAGGACCGCCCTCAGTGAGTCTAAGCTCACCACCGCCCCGGGAGTCCGGCACTACGAGGCTCAACTATACGAAACTAAAGAGGCATCATCCGCGATACAAGAGGCAGAGAACGACTTTCGAGCCGAGAGCCACGAGTACGGATTCACGTCACTACGACAAGTACAAAGAGGAGGACCACAACATCGAGGGCCTCGGCCGTGACAACAACAAGGAGAACCACAGAGGTGACTGGCAGACGGAGGATGAGGAGTGCGGCGCGGAGGCAGCATCAGTAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGGCTAGGTCATTACGGTCATCATCCGGATCCTGGAGAGGTCGATCTGCCGCCCGAAACACAACCAACACCACCAAGTGCAACGCTAGTCGGTACGACGATAACGCATCTTCGCGACACCGACCATCACTCGACCGACATTCAGAACTGCGACAGCGTGAAGATCAAATTTGAGACCCTCCACACGATGGATTCGTCGGATACGATCGACATCGACAGCCACATGTCGGATCGGGCGAGTGTGAGTTCAAAACATGCCGCCGAAAACGACAATATGATGATGATAACGCCGGAACTCTTGGGCCTAATGCCTTCCGGAAGCTCGGTGCACTCGGATTCCGGAGAAAATAATTCGAGAGGCGGAGGTTCGGGTTCTCATCATCATGGATCCAAATCGTGGACGCAGGAAGATATGGATGCAGCACTCGAGGCATTGAGAAATCACGATATGAGCCTCACGAAAGCGTCGGcgACCTTTGGAATCCCCTCGACAACACTTTGGCAGCGAGCTCACAGACTGGGTATTGATACGCCGAAGAAAGACGGTCCAACGAAATCGTGGAGCGACGAGAGTCTCAACAACGCACTCGAGGCTTTGAGAACCGGCACGATATCCGCGAACAAAGCGTCCAAAGCTTTCGGCATACCGTCTAGTACACTGTACAAAATCGCGAGGCGAGAAGGAATAAGGCTCGCGGCACCTTTCAACGCTAGTCCGACAACCTGGTCGCCGGCCGATCTCGATAGGGCTCTCGAAGCTATCAGATCCGGTCAGACATCGGTGCAGAGAGCTTCCACGGAATTTGGAATTCCCACGGGCACTTTGTATGGCAGATGCAAGAGGGAAGGCATCGAGTTGAGCAGGAGCAACCCTACACCATGGAGCGAGGACGCGATGACAGAAGCACTCGAGGCTGTCAGGTTGGGTCATATGAGCATAAATCAAGCAGCTATTCACTACAATCTCCCTTACTCGTCGTTGTACGGCCGTTTCAAGAGGGGAAAGTACGAGGATCCTGTGGTCAGCGAGATGTCGCAAGACGGCAGCAATCCGCACTTCCATCCGCACCAGAGTCCGCATCAGAATCACTCGTCCTCCCTCCCAGACCAAATGCCTTATCAGGGTAGCTGA
Protein Sequence: MLFSVDALRIIPARTHLPSSLSSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPPRESGTTRLNYTKLKRHHPRYKRQRTTFEPRATSTDSRHYDKYKEEDHNIEGLGRDNNKENHRGDWQTEDEECGAEAASVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAAENDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHPHQSPHQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00306165;
90% Identity: iTF_01560354;
80% Identity: -