Basic Information

Insect: Megachile lagopoda
Gene Symbol: -
Assembly: GCA_036983795.1
Location: CM072794.1:282241-284784[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 7.7e-13 1.6e-09 37.9 0.0 1 39 298 337 298 341 0.90

2 4 2.4e-12 4.9e-09 36.3 0.1 2 39 353 390 352 393 0.94

3 4 8.6e-19 1.8e-15 56.9 0.0 2 45 408 452 407 452 0.97

4 4 9.9e-19 2e-15 56.7 0.1 1 42 459 501 459 502 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	7.7e-13	1.6e-09	37.9	0.0	1	39	298	337	298	341	0.90
2	4	2.4e-12	4.9e-09	36.3	0.1	2	39	353	390	352	393	0.94
3	4	8.6e-19	1.8e-15	56.9	0.0	2	45	408	452	407	452	0.97
4	4	9.9e-19	2e-15	56.7	0.1	1	42	459	501	459	502	0.97

Sequence Information

Coding Sequence: ATGAACAGAGGCTCGTTGTTGAAAACGGCCGATCAGCTGAAGATCAAGGGACTCTGCGAGGTACCGGAAAGCAGAGACGGTCCACCCTCGGTTAGTCTGAGTTCGCCACCGAGGGAACCCGGTACTCCTAGAATAAATTTCACCAAACTGAAACGACATCATCCGAGATACAAGAGAGCCAGAACCAGCTTCGAGCCTCGAGCGACGGACTCGAGACACTACGACAGGTACAAAGAAGAGGAATCGAACGAAAATTATAATCGAGAGAACAAAGAGAACCACAGGGATTGGCAACCCGACGATGAAGAGTGCACGGAAGCAACGACCGCTGCAGTAGCCTTAGAAACTTGTCAACgcaacaataacaacaacatCAACATTGCTAATACCAGTAACgtcaacaacaacaacaacaacaacaataacaataacaataacaacaacaacaacaacaacaacaataacgGTGACATGTTTTGTCATACAGGACTCGGTCATTATGGTCACCATCCGGATCCTGGAGAGGTCGATCTGCCTCCAGAGACCCAACCCACGCCGCCGAGCGCCACGTTAGTCGGGACCACGATCACGCATCTCAGAGATCCGGATCATCATGCCACAGAGATCCAAAACTGTGACAGTGTAAAGATCAAGTTCGAAACGTTGCACACGATGGATTCGTCGGACACGATCGACATCGACAGTCACATGTCGGACCGGGCGAGCGTCAGTTCGAAGAACGCGACCGACAACGACAACATGATGATGATCACGCCGGAACTGCTCGGTTTAATGCCTTCCGGAAGCTCCGTTCACTCGGATTCCGGCGAAAATAACTCGAGGGGTCATTCCGGACAGTCCAGCTCTCACCATCACGGTTCCAAGTCGTGGACTCAAGAGGACATGGACGCCGCTCTGGAAGCGCTGCGAAATCACGACATGAGTCTGACGAAAGCCTCCGCGACGTTCGGTATACCCTCGACGACGTTGTGGCAAAGAGCGCATCGACTAGGTATAGACACGCCGAAAAAGGACGGGCCGACCAAGTCTTGGAGCGACGAGAGTTTGAATAACGCGCTCGAAGCCCTGCGAACCGGAACGATCTCGGCCAACAAAGCGTCGAAGGCGTTCGGGATACCTTCCAGCACCTTGTACAAAATCGCGAGAAGAGAAGGCATTCGGCTGGCTGCGCCTTTCAACGCGAGTCCCACCACTTGGTCACCCGCCGATCTCGATCGCGCCCTCGAGGCGATAAGATCCGGCCAAACGTCCGTGCAAAGGGCGTCCACCGAATTCGGTATACCGACGGGAACCTTGTACGGCAGATGCAAGAGGGAGGGCATCGAACTCAGCAGGAGTAACCCTACACCCTGGAGCGAAGACGCCATGACCGAAGCTCTCGAGGCGGTCAGATTAGGACACATGAGCATCAATCAGGCGGCTATTCACTACAATCTACCGTATTCTTCTCTGTACGGCCGTTTCAAGAGAGGAAAGTACGAAGAACCAGCCGTTGGAGACTTGTCGCAAGACGGCAGCAATCCTCATTTCCATCAGAGTCCGACTCAGAATCATTCGTCCGCCGTACCGGATCAGATGCCGTACCAGGGCAGCTGA
Protein Sequence: MNRGSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTSFEPRATDSRHYDRYKEEESNENYNRENKENHRDWQPDDEECTEATTAAVALETCQRNNNNNINIANTSNVNNNNNNNNNNNNNNNNNNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHATEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNATDNDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGDLSQDGSNPHFHQSPTQNHSSAVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00306165;
80% Identity: -