Dnoa001806.1
Basic Information
- Insect
- Dufourea novaeangliae
- Gene Symbol
- bab2
- Assembly
- GCA_001272555.1
- Location
- NW:2668238-2697841[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-13 6.9e-10 37.6 0.0 1 39 383 422 383 426 0.90 2 4 1.8e-12 2.1e-09 36.1 0.1 2 39 438 475 437 478 0.94 3 4 6.4e-19 7.7e-16 56.7 0.0 2 45 493 537 492 537 0.97 4 4 7.3e-19 8.8e-16 56.5 0.1 1 42 544 586 544 587 0.97
Sequence Information
- Coding Sequence
- ATGGTAAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAACATGACGTCCGTTTTCCATCAACTTTTACAAACCGAAGCGTTCGTGGACGTCACACTGGCATGTAACGAGGCCTCATTGAAAGCACACAAGGTGGTATTGTCAGCGTGCAGTTcctattttcaaaaactactACTCTCGAATCCCTGCAAACACCCGACGATCATCATGCCACAGGATGTCTGTTTCAATGATCTCAAGTTCATCATAGAGTTCGTCTACAGGGGTGAGATCGACGTCTCGCAAGCCGAACTTCAGTCGCTATTGAAAACGGCCGACCAGCTGAAGATAAAGGGCCTCTGCGAGGTCCCGGAAAGCAGAGACGGTCCGCCGTCGGTGAGCCTGAGCTCGCCACCGCGGGAACCAGGCACACCCAGGATAAATTTCGCGAAGCTGAAGAGGCATCATCCTCGATACAAAAGAGCGAGGACCACGTTCGAGCCTCGCGCGACCGACTCGAGGCATTACGACCGATACAAAGAGGAGGAATCGAACGAGGATTACAATCCGGAGAACAAAGAGAATCACATAGACTGGCAGGCCGAAGATGAAGATTGCACGGAGGGAACAACCGCAACAGTAGTCTTGGAAACGTGCCAACggaacaacaataataataacaataacaacagCGGTAACGGTACgaacaacaataacaacgGCGACATGTTCTGTCATACAGGGCTCGGCCATTATGGACATCATCCGGATCCTGGGGAGGTCGATCTACCCCCGGAAACTCAACCCACCCCACCTAGTGCGACTCTGGTTGGCACTACGATCACCCACCTAAGAGATCCGGATCATCATTCGACAGAGATTCAGAACTGTGACAGTGTGAAGATAAAGTTCGAGACGTTGCACACGATGGACTCTACGGACACGATCGACATAGACAGCCACATGTCCGATCGGGCGAGCGTCAGTTCGAAGAACGCAGCGGACAGCGACAACATGATGATGATCACGCCTGAGCTGCTCGGTTTAATGCCGTCTGGAAGTTCCGTGCACTCGGATTCAGGTGAGAACAACTCGAGGGGCCATTCCGGGCAGTCGAGTTCCCATCATCACGGATCGAAATCGTGGACCCAGGAGGATATGGACGCCGCTTTGGAAGCATTGAGGAACCATGACATGAGCCTGACGAAAGCCTCCGCAACTTTCGGTATACCATCGACGACGTTATGGCAAAGAGCGCACCGGTTAGGCATAGACACACCAAAAAAGGACGGCCCGACGAAGTCGTGGAGCGACGAGAGCCTCAACAACGCTCTCGAGGCGCTCAGAACCGGCACGATCTCTGCGAACAAGGCCTCGAAAGCGTTCGGTATACCGTCGAGCACGTTGTACAAAATCGCGAGGAGGGAAGGCATCAGGCTAGCCGCGCCTTTCAACGCAAGTCCGACCACATGGTCGCCGGCCGATCTGGATCGCGCACTGGAAGCGATCAGGTCCGGTCAGACGTCCGTGCAGAGAGCCTCCACCGAATTCGGTATACCAACGGGTACCTTGTATGGTAGATGTAAGAGGGAAGGAATCGAGCTGAGCAGGAGTAATCCCACGCCGTGGAGCGAGGATGCTATGACAGAAGCTCTCGAGGCTGTCAGATTAGGTCACATGAGCATCAATCAAGCAGCTATTCATTATAATCTACCCTATTCGTCGTTGTACGGTCGGTTCAAAAGGGGGAAGTACGAAGAACCGTCGGTCGGCGATATGTCGCAAGACGGTAGCAATCCGCATTTCCATCAGAGTCCGAATCAGAATCATTCGTCCGTCGTTCCGGATCAGATGCCCTACCAAGGCAGCTGA
- Protein Sequence
- MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFAKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEESNEDYNPENKENHIDWQAEDEDCTEGTTATVVLETCQRNNNNNNNNNSGNGTNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSTDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPSVGDMSQDGSNPHFHQSPNQNHSSVVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00306165;
- 80% Identity
- iTF_00625590;