Basic Information

Insect: Synergus gifuensis
Gene Symbol: -
Assembly: GCA_904066015.1
Location: CAJFCO010000089.1:521234-532409[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.5e-12 4.8e-09 36.6 0.0 1 39 282 321 282 325 0.90

2 4 6.3e-12 5.6e-09 36.4 0.1 2 39 337 374 336 377 0.94

3 4 2.3e-18 2e-15 57.0 0.0 2 45 392 436 391 436 0.97

4 4 2.6e-18 2.3e-15 56.8 0.1 1 42 443 485 443 486 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.5e-12	4.8e-09	36.6	0.0	1	39	282	321	282	325	0.90
2	4	6.3e-12	5.6e-09	36.4	0.1	2	39	337	374	336	377	0.94
3	4	2.3e-18	2e-15	57.0	0.0	2	45	392	436	391	436	0.97
4	4	2.6e-18	2.3e-15	56.8	0.1	1	42	443	485	443	486	0.97

Sequence Information

Coding Sequence: ATGTCTCACTACAGAAGAAGAAGAAAGAGAAAGTCCTTGCTGAAGACGGCAGATCAGCTGAAGATCAAGGGCCTTTGTGAGGTCCCCGAGAGCAGGGAGGGTCCACCGTCGGTTAGCCTCAGCTCACCACCACGTGAATCCGGTACCACCAGGTTAAACTACACAAAGCTAAAGAGGCACCATCCGAGATACAAGAGGCCAAGAACCACTTTCGAGGCTCGCAACTCGGATTCCAGGCACCACGACTTGTACAAGGAGGAAGACGCAGAAGGAGAATTTCAGCGCGATAAAGAGAATCACAGGGATTGTTGGCAGACTGAAGATGAGGAGTGTGCGGAGGCAACAGCAGCAGCAGTAGTCCTGGAATCCTGCCAACGCGACAATAACAACGGTAACGGTACTACAAACAACAACAACGGTGACATGTTTTGTCACACAGGGCTTGGTCACTACGGACACCATCCGGACCCAGGAGAAGTAGATCTTCCTCCGGAGACACAGCCAACACCACCTAGTGCTACTCTCGTCGGCACGACTATCACACATCTCAGGGACTCGGATCATCAATCTACAGAAATCCAAAATTGCGACAGTGTCAAGATAAAGTTCGAGACCTTACACACAATGGACTCTTCGGATACAATAGACATCGACAGCCACATGTCGGATAGAGCGAGTGTGAGTTCCAAAACAGCAGGTGACAACGACAACATGATGATGATAACACCCGAACTTCTCGGTCTCATGCCGTCTGGAAATTCCGTCCATTCGGATTCTGGTGAAAATAACTCCAGGGGTCATTCTGGACAATCAGGGTCGCACCACCACGGCTCGAAATCCTGGACCCAAGAGGACATGGACGCAGCTTTGGACGCTTTGAGAAATCACGACATGAGTCTCACCAAAGCATCTGCAACATTTGGAATACCTTCGACGACACTTTGGCAAAGAGCTCATCGTTTAGGAATTGATACACCGAAAAAAGATGGACCAACAAAATCGTGGAGTGATGAGAGTCTTAATAATGCTTTGGAAGCGTTAAGGACTGGAACAATATCTGCGAATAAAGCATCCAAGGCTTTTGGCATACCTTCCAGTACCCTGTATAAAATTGCTAGGAGAGAAGGAATCAGGCTCGCAGCTCCTTTTAATGCAAGCCCTACAACTTGGTCACCTGCTGACCTGGATAGAGCTTTGGAGGCAATTAGGTCTGGACAAACATCGGTCCAGAGAGCGTCGACGGAGTTTGGAATTCCAACTGGAACTCTTTACGGAAGGTGCAAAAGGGAAGGAATAGAACTTAGTAGAAGTAATCCTACTCCGTGGAGCGAGGATGCTATGACTGAAGCTCTTGAGGCTGTTAGATTAGGGCACATGAGTATAAATCAAGCAGCTATTCACTACAACTTGCCCTACTCTTCGCTATATGGGCGTTTCAAGAGAGGAAAATACGAAGAGCCAGTAGTCAACGATATGTCGCAGGATGGTAGCAGTCCTCATTATCACCATCAAAGTCCGAGTCAAAATCACACTTCTTCCCTTCCTGATCAAATGCCCTATCAGGACAGCTGA
Protein Sequence: MSHYRRRRKRKSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPRESGTTRLNYTKLKRHHPRYKRPRTTFEARNSDSRHHDLYKEEDAEGEFQRDKENHRDCWQTEDEECAEATAAAVVLESCQRDNNNGNGTTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDSDHQSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKTAGDNDNMMMITPELLGLMPSGNSVHSDSGENNSRGHSGQSGSHHHGSKSWTQEDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNDMSQDGSSPHYHHQSPSQNHTSSLPDQMPYQDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00306165;
90% Identity: iTF_00460397;
80% Identity: iTF_01391873;