Mlea028241.2
Basic Information
- Insect
- Megachile leachella
- Gene Symbol
- -
- Assembly
- GCA_963576845.1
- Location
- OY756260.1:455280-459510[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.2e-13 2.7e-09 37.5 0.0 1 39 418 457 418 461 0.90 2 4 2.8e-12 8.2e-09 36.0 0.1 2 39 473 510 472 513 0.94 3 4 1e-18 3e-15 56.6 0.0 2 45 528 572 527 572 0.97 4 4 1.2e-18 3.4e-15 56.4 0.1 1 42 579 621 579 622 0.97
Sequence Information
- Coding Sequence
- ATGAAAGGAAGCGCGAAAGGGGCCGGGGGTAGTAGAGAGAGGAGAGGAGACGCGAGAGACAGGATATACGCGGATAGAAACGGTTGGAAGTCATACCGGTGTCGGTACCGCCGCGAGTGCCGAGCAAAGAGAATCGGAGGTTGGGGTGGTCGATACGGCCCTGGGGCCGCGACAGCCACGTCGGAGGCCTCCCCATTCTTCCTGCAGGCGTTTTTGCCTCTGTACTCCCGCTCCCCGCTCAACCCCGTCTCTCTTGGCCATACGTCGGAGGCAAATGAACAAGAGCGTAACGAGAACGAGAACGTGAACGAGAAGGAGATAAACTGGATCGTTTATATCGTATCGTTGCAGTCGTTGTTGAAAACGGCCGACCAGCTGAAGATCAAGGGACTCTGCGAGGTACCGGAAAGCAGAGACGGTCCACCCTCGGTTAGTCTGAGTTCGCCACCGAGGGAACCCGGTACTCCTAGAATAAATTTCACCAAACTGAAACGACATCATCCGAGATACAAGAGAGCCAGAACCAGCTTCGAGCCTCGAGCAACGGACTCGAGACACTACGATAGGTACAAAGAGGAGGAATCGAACGAAaattataatcgagagaacaaAGAGAACCACAGAGATTGGCAAGCGGACGATGAAGAGTGCACGGAAGCAACCACCGCAGCAGTAGCCTTAGAAACTTGCCAgcgcaacaacaacaacaacatcaACATTGCTAACACCAGCAAcatcaacaacaacaataacaacaacaacaacaataataacaataataacggTAGCAATAGCAGCAACGGTAACGCCGCCAACAATAACAACGGTGACATGTTCTGTCATACAGGGCTCGGTCATTATGGTCACCATCCGGATCCTGGAGAGGTCGATCTGCCTCCAGAGACCCAACCTACGCCGCCGAGCGCCACCTTAGTCGGAACCACGATCACGCATCTCAGGGATCCGGATCATCATGCCACAGAGATCCAAAACTGTGACAGTGTAAAGATCAAGTTCGAAACGTTGCACACGATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCCGATCGGGCAAGCGTCAGTTCGAAGAACGCGACCGACAACGACAACATGATGATGATCACGCCGGAACTGCTCGGTTTAATGCCTTCCGGAAGCTCCGTTCACTCGGATTCCGGCGAAAATAACTCGAGGGGTCATTCCGGACAGTCTAGCTCCCATCATCACGGTTCCAAGTCGTGGACTCAAGAGGACATGGACGCCGCTTTGGAAGCGCTGCGAAATCACGACATGAGTCTGACGAAAGCCTCCGCGACATTCGGTATACCTTCGACGACGTTGTGGCAAAGAGCGCATCGACTAGGTATAGACACGCCGAAAAAGGACGGGCCGACCAAGTCTTGGAGCGACGAGAGTTTGAATAACGCGCTCGAAGCTCTGCGAACCGGAACGATCTCGGCCAACAAAGCGTCGAAGGCGTTCGGGATACCTTCCAGCACCTTGTACAAAATAGCCAGAAGAGAAGGCATTCGACTGGCTGCGCCTTTCAACGCGAGTCCCACCACTTGGTCACCCGCCGATCTCGATCGGGCCCTCGAGGCGATAAGATCCGGTCAAACGTCCGTGCAAAGGGCGTCCACCGAATTCGGTATACCGACGGGAACCTTGTACGGCAGATGCAAGAGAGAGGGCATCGAACTCAGCAGGAGTAACCCTACACCCTGGAGCGAAGACGCTATGACCGAAGCTCTCGAGGCGGTCAGATTAGGACACATGAGCATCAATCAGGCGGCTATTCACTACAATCTACCCTATTCTTCTCTCTACGGCCGTTTCAAGAGAGGAAAGTACGAAGAACCAGCCGTCGGAGACTTGTCGCAAGACGGTAGCAATCCTCATTTCCATCAGAGTCCTACTCAGAATCATTCGTCCGCCGTACCGGATCAGATGCCGTACCAGGGCAGCTGA
- Protein Sequence
- MKGSAKGAGGSRERRGDARDRIYADRNGWKSYRCRYRRECRAKRIGGWGGRYGPGAATATSEASPFFLQAFLPLYSRSPLNPVSLGHTSEANEQERNENENVNEKEINWIVYIVSLQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTSFEPRATDSRHYDRYKEEESNENYNRENKENHRDWQADDEECTEATTAAVALETCQRNNNNNINIANTSNINNNNNNNNNNNNNNNGSNSSNGNAANNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHATEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNATDNDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGDLSQDGSNPHFHQSPTQNHSSAVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00306165;
- 80% Identity
- -