Slae004293.1
Basic Information
- Insect
- Synergus laeviventris
- Gene Symbol
- -
- Assembly
- GCA_032275145.1
- Location
- JAUESI010000008.1:3714785-3722084[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7e-12 5.4e-09 36.4 0.0 1 39 352 391 352 395 0.90 2 4 3.1e-12 6.2e-09 36.1 0.1 2 39 407 444 406 447 0.94 3 4 1.1e-18 2.3e-15 56.8 0.0 2 45 462 506 461 506 0.97 4 4 1.3e-18 2.6e-15 56.6 0.1 1 42 513 555 513 556 0.97
Sequence Information
- Coding Sequence
- ATGAATTGGGGGTGGTTAGGGTTGGGGGTGGTCGATACGGCCCTGGGGCCGCGACAGCCACGTCGGAAGCTTCCCCTATTCTTCCTGCGGGCGTTTTTGCCTTCTCCGCCTCCGACACCAGACCTTCCCCAGCACAGCCCCACTCACCGGCTATGGCATCACCATCACCCACCCCCCACAACCCCGCTTAGTCGCGCCACCCCAGGGTTGATTAAAGAACAGAGCCCGGCTTCGGCAGGAAGGTCCTTGCTGAAGACGGCAGATCAGCTGAAGATCAAGGGCCTTTGTGAGGTCCCAGAGAGCAGGGAGGGTCCACCGACGGTTAGCCTCAGCTCACCACCACGAGAGTCCAGTACCACCAGGTTAAACTACACAAAGCTAAAGAGGCACCATCCGAGATACAAGAGGCCAAGAACCACTTTCGAGGCTCGCAACTCGGATTCCAGGCACCACGACTTGTACAAGGAGGAAGACGCAGAAGGAGACTTTCAGCGTGATAAAGAGAATCACAGGGATTGTTGGCAGACCGAAGATGAGGAGTGTGCGGAGGCAACAGCAGCAGCAGTAGTCCTGGAATCCTGCCAACGCGACAATAACAACGGTAACGGTCCTACAAACAACAACAACGgtGACATGTTTTGTCACACAGGGCTTGGGCACTACGGACACCATCCGGATCCAGGAGAAGTGGATCTTCCTCCGGAGACACAGCCAACACCACCTAGTGCTACTCTCGTCGGCACGACCATCACACACCTTAGGGACTCGGATCATCAATCTACAGAAATCCAAAATTGCGACAGCGTGAAGATAAAGTTCGAGACCTTACACACAATGGATTCTTCGGATACAATAGACATCGACAGCCACATGTCGGACAGAGCGAGTGTGAGTTCCAAAACGGCAGGCGACAACGACAACATGATGATGATAACACCCGAACTTCTCGGCCTCATGCCGTCTGGAAATTCCGTCCATTCGGATTCTGGTGAAAATAACTCCAGGGGTCATTCTGGTCAATCAGGGTCACACCATCACGGCTCTAAATCCTGGACTCAAGAAGACATGGATGCAGCTTTGGACGCCTTGAGAAATCACGACATGAGTCTCACTAAAGCATCTGCAACATTTGGAATACCTTCGACGACACTGTGGCAAAGAGCTCATCGTTTAGGAATCGATACACCGAAGAAAGATGGACCAACAAAATCGTGGAGTGATGAGAGTCTTAATAATGCTCTGGAAGCACTAAGAACCGGAACAATATCTGCGAATAAAGCATCCAAGGCTTTTGGCATACCTTCCAGTACCCTGTACAAAATTGCTAGGAGAGAAGGAATCAGGCTTGCAGCTCCTTTTAATGCAAGTCCTACAACTTGGTCACCTGCTGACCTGGATAGAGCTTTGGAAGCAATTAGATCTGGTCAAACATCGGTCCAGAGAGCGTCGACGGAGTTTGGAATACCAACTGGAACGCTTTATGGAAGGTGCAAGAGGGAAGGAATTGAACTTAGTAGAAGTAATCCTACTCCGTGGAGCGAGGACGCTATGACTGAAGCTCTTGAGGCCGTTAGatTGGGGCACATGAGTATAAATCAAGCAGCTATTCATTATAACTTGCCGTACTCATCTCTATATGGCCGTTTCAAGAGAGGAAAATACGAAGAGCCAGTAGTCAACGATATGTCGCAGGATGGTAGCAGTCCTCATTATCACCATCAAAGTCCGAGTCAAAATCATACTTCTTCCCTCCCCGATCAAATGCCCTATCAGGACAGCTGA
- Protein Sequence
- MNWGWLGLGVVDTALGPRQPRRKLPLFFLRAFLPSPPPTPDLPQHSPTHRLWHHHHPPPTTPLSRATPGLIKEQSPASAGRSLLKTADQLKIKGLCEVPESREGPPTVSLSSPPRESSTTRLNYTKLKRHHPRYKRPRTTFEARNSDSRHHDLYKEEDAEGDFQRDKENHRDCWQTEDEECAEATAAAVVLESCQRDNNNGNGPTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDSDHQSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKTAGDNDNMMMITPELLGLMPSGNSVHSDSGENNSRGHSGQSGSHHHGSKSWTQEDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNDMSQDGSSPHYHHQSPSQNHTSSLPDQMPYQDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00306165;
- 90% Identity
- iTF_00460397;
- 80% Identity
- -