Basic Information

Insect: Lasioglossum leucozonium
Gene Symbol: -
Assembly: GCA_028454225.1
Location: CM052217.1:5083445-5088634[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.2e-13 1.1e-09 37.9 0.0 1 39 290 329 290 333 0.90

2 4 1.6e-12 3.2e-09 36.3 0.1 2 39 345 382 344 385 0.94

3 4 5.9e-19 1.2e-15 57.0 0.0 2 45 400 444 399 444 0.97

4 4 6.7e-19 1.3e-15 56.8 0.1 1 42 451 493 451 494 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.2e-13	1.1e-09	37.9	0.0	1	39	290	329	290	333	0.90
2	4	1.6e-12	3.2e-09	36.3	0.1	2	39	345	382	344	385	0.94
3	4	5.9e-19	1.2e-15	57.0	0.0	2	45	400	444	399	444	0.97
4	4	6.7e-19	1.3e-15	56.8	0.1	1	42	451	493	451	494	0.97

Sequence Information

Coding Sequence: ATGAAACCGTATCCGTCGGGAACGGAGCGCAAGGATGAGACGGCGTCGTTATTGAAAACGGCCGATCAGCTGAAGATCAAGGGCCTCTGCGAGGTGCCGGAGAGCAGGGACGGTCCGCCATCGGTGAGTCTGAGCTCGCCGCCACGGGAACCGGGCACTCCCAGGCTAAATTTCACCAAGTTGAAGAGACGTTACAAACGGGCGAGGACCACGTTCGAGCCTCGCGCGACGGATTCGAGGCACTACGACCGATACAAAGAGGAGGAATCGAACGGGAATTACAATCCGGAGAACAAAGAAAATCACAGAGACTGGCAGACCGAAGATGAAGATTGTACGGAGGGCACAACAGCAACAGTAGTCTTGGAAACGTGCCAACGGACCAATAACAATAACAATAACAACAATAACAACGGTAACGGTGCGAACAACAACAACAACGGTGACATGTTCTGTCATACAGGGCTCGGACACTATGGACACCACCCGGATCCTGGGGAAGTCGACCTACCCCCAGAGACCCAACCAACCCCACCTAGCGCCACGTTGGTCGGCACTACGATCACCCACCTGAGGGATCCGGATCACCATTCCACAGAGATTCAGAACTGTGACAGTGTGAAGATAAAGTTCGAAACGTTGCACACGATGGACTCGTCTGACACGATCGACATTGACAGCCACATGTCGGACCGGGCGAGTGTCAGTTCGAAGAACGCAGCGGACAGCGACAACATGATGATGATCACGCCAGAGCTGCTCGGTTTAATGCCCTCTGGAAGTTCCGTCCACTCGGATTCCGGTGAGAACAACTCGAGAGGCCATTCTGGACAGTCGAGCTCTCATCATCACGGATCGAAATCGTGGACCCAGGAAGACATGGACGCCGCATTGGAAGCGTTAAGGAACCATGACATGAGCTTGACGAAAGCCTCCGCAACCTTCGGCATACCATCGACAACATTGTGGCAGCGGGCGCATCGGTTAGGCATAGACACACCAAAAAAGGATGGACCAACGAAGTCGTGGAGCGACGAAAGTCTGAACAACGCCCTCGAAGCGCTGAGAACTGGCACGATCTCGGCCAACAAGGCGTCGAAAGCGTTCGGCATACCCTCGAGCACGTTGTACAAAATCGCGAGGAGGGAAGGCATCAGATTGGCTGCGCCGTTTAACGCCAGTCCTACCACTTGGTCGCCCGCCGATCTGGACCGCGCTTTAGAAGCAATAAGGTCTGGTCAAACGTCCGTGCAGAGAGCTTCCACTGAATTCGGTATTCCAACAGGGACCTTGTACGGTAGATGTAAGAGGGAAGGAATCGAATTGAGCAGAAGTAATCCTACGCCATGGAGCGAGGATGCTATGACAGAAGCACTCGAAGCCGTCAGACTGGGACACATGAGCATCAATCAAGCAGCCATTCACTACAATCTACCCTATTCGTCGCTGTACGGTCGGTTCAAGAGGGGGAAGTACGAAGAGCCGGCAGTCGGTGATCTATCGCAAGACGGGAGCAATCCACATTTTCATCAAAGTCCGAATCAGAATCATTCGTCCGCCGTTCCCGATCAAATGCCCTACCAAGGCAGCTGA
Protein Sequence: MKPYPSGTERKDETASLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRLNFTKLKRRYKRARTTFEPRATDSRHYDRYKEEESNGNYNPENKENHRDWQTEDEDCTEGTTATVVLETCQRTNNNNNNNNNNGNGANNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGDLSQDGSNPHFHQSPNQNHSSAVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00306165;
80% Identity: -