Basic Information

Insect: Nomada fucata
Gene Symbol: bab1
Assembly: GCA_948146005.1
Location: OX411279.1:28087564-28100452[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 7.5e-13 1.1e-09 37.6 0.0 1 39 409 448 409 452 0.90

2 4 2.3e-12 3.2e-09 36.0 0.1 2 39 464 501 463 504 0.94

3 4 8.4e-19 1.2e-15 56.6 0.0 2 45 519 563 518 563 0.97

4 4 6.1e-19 8.5e-16 57.1 0.1 1 42 570 612 570 615 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	7.5e-13	1.1e-09	37.6	0.0	1	39	409	448	409	452	0.90
2	4	2.3e-12	3.2e-09	36.0	0.1	2	39	464	501	463	504	0.94
3	4	8.4e-19	1.2e-15	56.6	0.0	2	45	519	563	518	563	0.97
4	4	6.1e-19	8.5e-16	57.1	0.1	1	42	570	612	570	615	0.96

Sequence Information

Coding Sequence: ATGGAGACGGATCGTTATTGGGGCGTGCACTACAGCGGCGGCATGGCCGGGCAgcattactgcctgcgctggaacaactatcaatcaaacatgacgtccgtctttcatcagctcctccaaacggaagctttcgtggatgttaccttggcgtgcaacgaagcttccttgaaagcacataagGTGGTACTTTCAGCGTGCAGTTCCTACTTTCAAAAGCTCCTGCTTTCGAATCCCTGCAAGCATCCAACAATTATTATGCCGCAGGACGTGTGTTTCAACGATCTGAAATTCATCATAGAGTTCGTCTACAGGGGAGAAATCGACGTTTCGCAAGCAGAACTTCAGTCGTTATTGAAAACAGCTGATCAGCTGAAGATCAAAGGACTGTGCGAGGTGCCGGAAACCAGGGACGGCCCACCATCCGTGAGTTTGAGTTCGCCACCGAGAGAACCCGGCACGCCAAGGATAAATTTTACCAAACTGAAGAGGCACCATCCGAGGTACAAGAGAGCCAGAACCACGTTCGAGCCTCGCGCGACGGACTCGAGGCATTACGACCGGTACAAAGAGGAGGAACTGAACGACAACTATAACCGGGAGAACAAAGAGAACCATAGAGACTGGCAAGCCGAAGATGAAGAGTGCACAGAGGCAACCACGGGAGCAGTAGTCTTGGAAGCTTGCCAACgcaacagtaacagcagcagcagcaccagtaccgggaacaacaaccacaacagcactgcgaataacaataacaatagtaacgggaacagcgcgagcagcaacaacaacaacgGTGACATGTTTTGTCATACAGGTCTTGGCCATTACGGGCATCATCCGGATCCCGGGGAGGTCGACCTACCACCGGAGACCCAACCTACGCCACCGAGTGCCACGTTGGTCGGTACTACGATTACGCATCTGAGGGATCCGGATCATCATTCGACAGAGATTCAGAATTGCGACAGCGTGAAGATCAAGTTTGAAACGTTACATACGATGGACTCCTCGGATACGATCGACATCGACAGCCACATGTCCGATCGAGCGAGCGTCAGTTCGAAAACGGCAGCCGACAGCGACAACATGATGATGATCACGCCCGAGTTGCTGGGCCTGATGCCTTCTGGAAGTTCGGTTCACTCGGATTCCGGCGAAAATAACTCGAGGGGTCACTCCGGGCAGGCGGGCTCCCATCACCACGGCTCGAAATCGTGGACCCAAGAGGACATGGACGCAGCTCTGGAAGCATTACGAAATCACGATATGAGCCTGACGAAAGCCTCTGCAACATTCGGTATACCCTCGACGACTCTCTGGCAAAGGGCACACCGGCTGGGAATCGACACACCCAAGAAGGACGGCCCCACCAAGTCGTGGAGCGACGAGAGCTTGAACAACGCCCTCGAAGCGCTGCGAACCGGCACGATATCGGCGAACAAAGCTTCGAAAGCGTTCGGCATACCTTCCAGCACCCTGTATAAAATCGCGCGAAGAGAAGGCATCAGGCTGGCGGCGCCGTTCAACGCGAGTCCTACCACTTGGTCTCCAGCCGACCTGGACCGCGCCCTCGAGGCGATACGCTCCGGGCAAACGTCCGTTCAGAGAGCATCCACGGAATTCGGTATACCGACCGGAACGTTGTACGGGCGATGCAAGAGAGAGGGAATCGAACTTAGCAGAAGCAATCCCACACCCTGGAGCGAGGACGCTATGACAGAGGCTCTCGAAGCTGTTAGATTAGGCCACATGAGCATCAATCAGGCGGCTATCCACTATAATTTACCATACTCTTCTTTGTACGGTCGGTTCAAGAGGGGAAAGTACGAGGAATCGGCGGTCGGCGATATATCCCAGGACGGTAGCAGCCCTCATTTTCATCAAAGTCCAACTCAGAATCATACGTCCGCCGTGCCGGACCAAATGTCGTATCAAGGTAGCTGA
Protein Sequence: METDRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPETRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEELNDNYNRENKENHRDWQAEDEECTEATTGAVVLEACQRNSNSSSSTSTGNNNHNSTANNNNNSNGNSASSNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKTAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQAGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEESAVGDISQDGSSPHFHQSPTQNHTSAVPDQMSYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00306165;
80% Identity: iTF_01067032;