Basic Information

Insect: Andrena flavipes
Gene Symbol: -
Assembly: GCA_963971345.1
Location: OZ020479.1:12724086-12728137[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.1e-12 2.1e-09 37.7 0.0 1 39 345 384 345 388 0.90

2 4 1.6e-11 6.4e-09 36.2 0.1 2 39 400 437 399 440 0.94

3 4 1.1e-17 4.6e-15 55.8 0.0 2 45 455 499 454 499 0.97

4 4 6.6e-18 2.6e-15 56.6 0.1 1 42 506 548 506 549 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.1e-12	2.1e-09	37.7	0.0	1	39	345	384	345	388	0.90
2	4	1.6e-11	6.4e-09	36.2	0.1	2	39	400	437	399	440	0.94
3	4	1.1e-17	4.6e-15	55.8	0.0	2	45	455	499	454	499	0.97
4	4	6.6e-18	2.6e-15	56.6	0.1	1	42	506	548	506	549	0.97

Sequence Information

Coding Sequence: ATGACGAGCTTTTACCAAAAATATGCAAATCCGCTCGCCTGTCCTCGGCCCTTCTTCTTTATTCCGCTCCGGGAAAGCGGTTTATCGGAATGGGCTATTCCACGTCCACCTTCCACGGTCCTCGCGCCCCCCGCGATTCCGGGACGTATCGGCGCGACTTCCGGCTACGCGGTGACGATCCTTCGGGTTCCACTGAGCGGTGGAATTCTGTCACTGTTGAAGACGGCCGATCAGCTGAAGATCAAAGGTCTCTGCGAGGTGCCGGAAAGCAGAGACGGCCCACCCTCGGTGAGCCTGAGCTCGCCGTCAAGGGAACCAGGCACTCCTAGGATAAACTTCACCAAGCTAAAGCGTCACCATCCGAGGTACAAGAGGGCCAGAACCACGTTCGAGCCTCGCGCCACCGACTCCAGGCACTACGACAGGTACAAAGAGGAGGAGTCGAACGAGAACTACAATCGGGAGAACAAAGAGAACCACAGGGACTGGCAGGCCGAAGATGAAGATTGCGCGGAGGGAACAACGGCAGCAGTAGTCTTGGAAACTTGCCAGcgcaacaacaacaataacaacaacaacgGTAACGGGACGAACAACAATAACAACGGCGACATGTTCTGTCACACAGGGCTTGGCCATTACGGCCACCATCCTGATCCTGGAGAGGTCGATTTGCCCCCAGAGACACAGCCCACGCCACCGAGCGCAACCTTGGTTGGCACCACGATCACCCATCTCAGAGATCCGGATCATCACTCTACAGAGATTCAGAACTGTGACAGCGTGAAGATAAAGTTCGAAACGTTACACACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCGGACCGCGCGAGCGTCAGCTCGAAGAACGCGGCCGACAGCGACAACATGATGATGATCACGCCGGAGCTGCTCGGCCTGATGCCGTCTGGAAGCTCCGTCCACTCGGATTCCGGCGAGAACAACTCCAGGGGCCATTCCGGCCAGTCCAGCTCGCACCACCACGGCTCGAAATCGTGGACGCAGGAGGATATGGACGCGGCGCTGGAAGCTTTGAGGAACCACGACATGAGCCTCACGAAAGCCTCTGCGACCTTCGGCATACCATCGACGACTCTGTGGCAAAGGGCGCACCGGCTAGGGATAGACACCCCGAAGAAAGACGGGCCGACCAAGTCGTGGAGCGACGAGAGCCTGAACAACGCCCTCGAGGCTCTTCGAACCGGTACCATCTCCGCGAACAAGGCCTCGAAGGCGTTCGGGATACCATCCAGCACGTTGTACAAAATCGCTAGGAGGGAAGGGATCAGACTGGCCGCGCCTTTCAACGCCAGCCCCACCACCTGGTCGCCCGCTGACCTGGACCGTGCTCTGGAAGCTATCAGGTCTGGCCAGACGTCCGTGCAGAAAGCTTCCATGGAGTTCGGAATACCCACGGGGACGTTGTACGGTAGATGTAAGAGGGAAGGCATCGAGCTGAGCAGAAGTAACCCTACACCTTGGAGCGAGGACGCCATGACCGAGGCCCTCGAAGCCGTCAGATTAGGGCACATGAGCATCAATCAAGCAGCTATTCACTACAATCTACCCTACTCCTCTTTGTACGGCCGTTTCAAGAGGGGGAAGTACGAGGAACCCGCCGTCGGCGACATATCCCAAGACGGAAGCAATCCGCATTTCCATCAGAGCCCCAGCCAGAATCATTCTACCGCCGTTCCCGATCAAATGCCTTACCAAGGCAGCTGA
Protein Sequence: MTSFYQKYANPLACPRPFFFIPLRESGLSEWAIPRPPSTVLAPPAIPGRIGATSGYAVTILRVPLSGGILSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPSREPGTPRINFTKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEESNENYNRENKENHRDWQAEDEDCAEGTTAAVVLETCQRNNNNNNNNGNGTNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQKASMEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGDISQDGSNPHFHQSPSQNHSTAVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00306165;
80% Identity: -