Basic Information

Insect: Ophion costatus
Gene Symbol: -
Assembly: GCA_951751655.1
Location: OX632360.1:6432782-6441515[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1e-12 1.6e-09 37.8 0.0 1 39 312 351 312 355 0.90

2 4 3.2e-12 5e-09 36.3 0.1 2 39 367 404 366 407 0.94

3 4 1.2e-17 1.9e-14 53.6 0.0 2 45 422 466 421 466 0.97

4 4 4e-18 6.2e-15 55.2 0.0 1 42 473 515 473 516 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1e-12	1.6e-09	37.8	0.0	1	39	312	351	312	355	0.90
2	4	3.2e-12	5e-09	36.3	0.1	2	39	367	404	366	407	0.94
3	4	1.2e-17	1.9e-14	53.6	0.0	2	45	422	466	421	466	0.97
4	4	4e-18	6.2e-15	55.2	0.0	1	42	473	515	473	516	0.97

Sequence Information

Coding Sequence: ATGTTCAATACATCGATGCTCACAGATGCTGCTTATCAAAGGCAACCCACCCGCACTCCTCCGCTTATCCTCGTTTTATTGGACTCGCGTCCAAGCTGGAAACAAATCGGGGACtcGCTGCTGAAGACGGCCGATCAGCTAAAGATCAAGGGCCTCTGCGAGGTTCCCGAGAGCAGAGAAGTTCCGCCGTCAGTGAGCCTTAgctcgccgccgccgccgcgggACTCGACGGCTACGAGGCTCAACTATACGAAACTAAAGAGGCATCATCCCCGCTTCAAGAGACAAAGAACGAGCTTCGAGCCGCGAGCGTCGTCCGCGGATTCACGCAACTACGACAAGTACAAAGAGGCGGAGCACAACATCGAAGGCCTCGGCCGTGACAACAACAAAGAGAATCACAGAGGTGACTGGCAGACGGAGGATGAGGAGTGCGGAGCGGAGGCAGCATCAGTAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCATTACGGACATCATCCAGATCCTGGAGAGGTAGATCTACCCCCGGAGACACAGCCAACGCCACCGAGCGCCACACTCGTCGGCACAACGATAACGCATCTTCGCGACCCCGACCATCACTCGACGGATATACAAAATTGCGACAGcgttaaaataaaattcgagaCTCTGCACACGATGGACTCCTCCGACACGATCGACATCGACAGTCATATGTCCGATCGGGCCAGCGTCAGCTCGAAACACGCAGCCGACAACGACAACATGATGATGATCACGCCGGAACTCTTGGGACTGATGCCTTCCGGTAGTTCCGTGAACTCGGACTCGGGTGAAAACAACTCCCGAGGCGGTGGCTCCGGTTCTCATCATCACGGCTCGAAATCATGGACTCAGGAAGACATGGATGCGGCGCTCGAAGCGCTGAGAAATCACGACATGAGCCTTACGAAAGCCTCAGCAACCTTTGGAATTCCGTCGACGACACTATGGCAGAGAGCGCACAGGCTCGGCATCGACACACCGAAGAAAGACGGGCCGACGAAATCGTGGAGCGACGAGAGTCTGAACAACGCCCTCGAGGCACTGAGAACCGGCACGATATCGGCGAACAAAGCGTCGAAAGCATTCGGCATACCGTCCAGCACGCTTTACAAAATTGCGAGAAGAGAGGGCATCAGGCTAGCGGCGCCGTTCAACGCGAGCCCGACTACTTGGGCACCGGCCGATCTCGACAGAGCACTCGAGGCGATTAGGGCGGGTCAGACTTCGGTACAGAGAGCGTCCACGGAATTTGGTATTCCGACGGGTACATTGTACGGTAGATGCAAGAGAGAGGGCATAGAATTGAGCCGTAGCAATCCCACACCCTGGAGCGAGGACGCGATGACAGAGGCACTCGAGTCCGTCAGATTGGGTCACATGAGCATCAATCAAGCTGCTATACATTACAATCTACCTTACTCGTCTCTCTACGGGCGCTTCAAGAGGGGCAAATACGAAGATCCGGTGGTGGGCGAGATGTCACAAGACGGCAGCAATCCTCACTTTCATTCGCATCAGAGTCCGCATCAAAATCACCCCTCGTCGCTACCCGATCAAATGCCTTATCAGGGCAGCTGA
Protein Sequence: MFNTSMLTDAAYQRQPTRTPPLILVLLDSRPSWKQIGDSLLKTADQLKIKGLCEVPESREVPPSVSLSSPPPPRDSTATRLNYTKLKRHHPRFKRQRTSFEPRASSADSRNYDKYKEAEHNIEGLGRDNNKENHRGDWQTEDEECGAEAASVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAADNDNMMMITPELLGLMPSGSSVNSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWAPADLDRALEAIRAGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVGEMSQDGSNPHFHSHQSPHQNHPSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00306165;
90% Identity: iTF_01560354;
80% Identity: -