Basic Information

Insect: Diachasmimorpha longicaudata
Gene Symbol: -
Assembly: GCA_034640455.1
Location: CM067964.1:2207314-2217043[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8.1e-13 1.1e-09 37.9 0.0 1 39 286 325 286 329 0.90

2 4 2.5e-12 3.3e-09 36.4 0.1 2 39 341 378 340 381 0.94

3 4 9e-19 1.2e-15 57.0 0.0 2 45 396 440 395 440 0.97

4 4 1e-18 1.4e-15 56.8 0.1 1 42 447 489 447 490 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8.1e-13	1.1e-09	37.9	0.0	1	39	286	325	286	329	0.90
2	4	2.5e-12	3.3e-09	36.4	0.1	2	39	341	378	340	381	0.94
3	4	9e-19	1.2e-15	57.0	0.0	2	45	396	440	395	440	0.97
4	4	1e-18	1.4e-15	56.8	0.1	1	42	447	489	447	490	0.97

Sequence Information

Coding Sequence: ATGTACCTCATTGATTTCATATTCCAGTCTCTGCTAAAAACGGCTGATCAATTGAAGATCAAGGGCCTCTGTGAGGTGCCTGAGAGCAAAGAGGGATCAGCATCAGTCAGTCTGAGTTCACCAGCACGAGAGCCTGCTACCCCTCGATTAAACTACACGAAGTTGAAGAGACACCACCCGAAGTACAAAAGAGCGAGGACATCGTTTGAAGCGATAACAGGGAGTGCAGACTCCAGGCGCTACGACAAGTACAAAAACGAGAGTAACGAGGGTGGTAGTGGTGCCACTGATTTTACCTTTGGtcgagaaaataataaagagAATCACCGAGGTGACTGGCAGACAACGACGGAGGATGAGGAGTGTGGGGTTGAGGCAGTAGTCCTGGAATCCTGCCAACGAGACATCAACAACGGTAACGGAACAAACAACAATAACGGTAATATGTTTTGTCACACAGGACTAGGACATTATGGTCATCATCCTGATCCAGGAGATGTCGATTTACCACCGGAAACCCAACCAACACCACCTAGTGCCACCCTGGTGGGCACCACTGTCACGCACCTGCGAGACTCAGATCATGTTACAGATATTCAAAACTGCGACAGTGTCAAGATAAAGTTTGAGACCCTCCACACGATGGACTCGTCAGACACAATTGACATTGACAGTCATATGTCGGATCGTGCAAGTGTCAGTTCCAAACATGAAAGTGACAACATGATGATGATAACACCAGAGCTTTTGGGCCTGATGCCGTCGGGTAGTTCGGTGCACTCGGACTCGGGGGAGAATAATTCTAGGGGGCACTCGGGGGGTTCTGGACATTATCATGGTACATCAAAGTCGTGGACGCAGGAGGATATGGACGCTGCACTGGAGGCGCTTAGAAATCATGACATGAGTTTGACGAAAGCTTCTGCGACATTTGGAATTCCCTCGACGACGTTGTGGCAGCGAGCCCATCGTCTGGGCATTGACACACCAAAAAAAGACGGCCCAACAAAATCCTGGAGCGATGAGAGCCTCAACAATGCCCTTGAGGCCCTCAGAACCGGCACGATATCGGCGAATAAAGCATCAAAGGCGTTTGGAATACCGTCCAGTACATTGTACAAAATAGCCAGGAGGGAGGGTATACGATTGGCAGCGCCATTCAACGCCAGTCCAACAACCTGGTCACCAGCCGATCTTGACAGAGCACTGGAGGCCATCAGATCCGGCCAGACATCGGTCCAAAGGGCCTCCACCGAGTTTGGTATACCCACGGGGACCCTTTACGGTAGATGTAAGCGTGAGGGCATTGAATTGAGCAGAAGCAATCCAACTCCCTGGAGTGAGGACGCCATGACAGAGGCACTGGAGGCGGTgcgacTGGGTCACATGAGCATCAATCAAGCAGCAATACATTACAATTTACCCTACTCATCTCTGTATGGGCGTTTCAAACGTGGAAAATACGAGGAGCCAGTGGTCAGTGAGATGTCCCAAGACGGTACCAACCCTCACTTCCATCAGAATCCTCACCAGAATCACTCATCACCACTTCCCGATCAAATGCCGTACCAGGGCAGCTGA
Protein Sequence: MYLIDFIFQSLLKTADQLKIKGLCEVPESKEGSASVSLSSPAREPATPRLNYTKLKRHHPKYKRARTSFEAITGSADSRRYDKYKNESNEGGSGATDFTFGRENNKENHRGDWQTTTEDEECGVEAVVLESCQRDINNGNGTNNNNGNMFCHTGLGHYGHHPDPGDVDLPPETQPTPPSATLVGTTVTHLRDSDHVTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHESDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGGSGHYHGTSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVSEMSQDGTNPHFHQNPHQNHSSPLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00306165;
90% Identity: iTF_00168300; iTF_00728579; iTF_01273697; iTF_00350917; iTF_00728745; iTF_00351242; iTF_01273194; iTF_00437995; iTF_01273010; iTF_00438195;
80% Identity: -