Basic Information

Insect: Clistopyga incitator
Gene Symbol: -
Assembly: GCA_947507545.1
Location: OX382173.1:15192371-15197988[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 9.6e-13 1.4e-09 37.9 0.0 1 39 300 339 300 343 0.90

2 4 2.9e-12 4.2e-09 36.3 0.1 2 39 355 392 354 395 0.94

3 4 1.1e-18 1.5e-15 56.9 0.0 2 45 410 454 409 454 0.97

4 4 1.3e-18 1.8e-15 56.7 0.0 1 42 461 503 461 504 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	9.6e-13	1.4e-09	37.9	0.0	1	39	300	339	300	343	0.90
2	4	2.9e-12	4.2e-09	36.3	0.1	2	39	355	392	354	395	0.94
3	4	1.1e-18	1.5e-15	56.9	0.0	2	45	410	454	409	454	0.97
4	4	1.3e-18	1.8e-15	56.7	0.0	1	42	461	503	461	504	0.97

Sequence Information

Coding Sequence: ATGCAACGGCGCCCGACGGCTGCGGTACAACCCCCGGGTGCCGATGCTGCTGGCTCTGCCGCTCCCGGTCCTCTCGAGCAGTCCTTGCTGAAGACGGCAGATCAGCTGAAGATCAAGGGCCTCTGCGAGGTCCCGGAGAGCAGAGAAGGACCGCCCTCAGTGAGTCTAAGCTCACCACCGCCCCGGGAGTCCGGCACTACGAGGCTCAACTATACGAAACTGAAGAGGCATCATCCGCGATACAAGAGGCAGCGAACGACTTTCGAGCCGAGAGCCACGAGTACGGATTCACGTCACTACGACAAGTACAAAGAGGAGGAACACAACATCGAGGGCCTCGGCCGTGACAACAACAAAGAGAACCACAGAGGTGACTGGCAGACGGAGGATGAGGAGTGCGGCGCGGAGGCAGCATCAGTAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGGCTAGGTCATTACGGTCATCATCCGGATCCTGGAGAGGTCGATCTGCCGCCCGAAACACAACCAACACCACCAAGCGCAACACTAGTCGGCACGACGATAACGCATCTTCGCGACCCCGACCATCACTCGACCGACATTCAGAACTGCGACAGCGTGAAGATCAAATTTGAGACCCTCCACACGATGGATTCGTCGGATACGATCGATATCGACAGCCACATGTCGGATCGGGCGAGCGTGAGTTCAAAACATGCCGCGGAAAACGACAACATGATGATGATAACGCCGGAACTCTTGGGCCTCATGCCTTCCGGAAGCTCGGTGCACTCGGATTCCGGAGAAAATAATTCGAGAGGCGGAGGTTCGGGCTCCCACCATCATGGATCCAAATCGTGGACGCAGGAAGATATGGATGCGGCACTCGAGGCTTTGAGAAATCACGATATGAGCCTCACGAAGGCGTCGGCGACCTTCGGAATCCCCTCGACAACACTTTGGCAGCGAGCTCACAGACTGGGTATTGATACACCGAAGAAAGACGGTCCAACGAAATCGTGGAGCGACGAGAGTCTCAACAACGCACTCGAGGCTCTGAGAACCGGCACGATATCCGCGAACAAAGCGTCCAAAGCTTTCGGCATACCGTCTAGTACGCTGTACAAAATCGCGAGGAGGGAAGGAATAAGGCTCGCGGCACCTTTCAACGCTAGTCCGACAACCTGGTCGCCGGCCGATCTAGATAGAGCTCTCGAAGCTATCAGATCCGGTCAGACATCGGTGCAGAGAGCTTCCACGGAATTCGGAATTCCTACGGGCACTTTGTATGGCAGATGCAAGAGGGAAGGCATCGAGTTGAGCAGAAGCAATCCTACACCATGGAGCGAGGACGCGATGACAGAAGCCCTCGAGGCTGTCAGGTTGGGTCACATGAGCATAAATCAAGCAGCTATTCACTACAATCTCCCTTACTCGTCGCTATACGGCCGTTTCAAGAGGGGAAAGTACGAGGATCCTGTGGTCAGCGAGATGTCGCAAGACGGCAGCAATCCGCACTTCCATCCACACCAGAGTCCGCATCAGAATCACTCGTCCTCCCTCCCCGACCAAATGCCTTATCAGGGTAGCTGA
Protein Sequence: MQRRPTAAVQPPGADAAGSAAPGPLEQSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPPRESGTTRLNYTKLKRHHPRYKRQRTTFEPRATSTDSRHYDKYKEEEHNIEGLGRDNNKENHRGDWQTEDEECGAEAASVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAAENDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHPHQSPHQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00306165;
90% Identity: iTF_01560354;
80% Identity: -