Basic Information

Insect: Andrena bicolor
Gene Symbol: bab1
Assembly: GCA_960531205.1
Location: OY482667.1:17243343-17260759[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.3e-12 1.6e-09 37.6 0.0 1 39 390 429 390 433 0.90

2 4 7.1e-12 4.9e-09 36.0 0.1 2 39 445 482 444 485 0.94

3 4 2.6e-18 1.8e-15 56.7 0.0 2 45 500 544 499 544 0.97

4 4 3e-18 2e-15 56.5 0.1 1 42 551 593 551 594 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.3e-12	1.6e-09	37.6	0.0	1	39	390	429	390	433	0.90
2	4	7.1e-12	4.9e-09	36.0	0.1	2	39	445	482	444	485	0.94
3	4	2.6e-18	1.8e-15	56.7	0.0	2	45	500	544	499	544	0.97
4	4	3e-18	2e-15	56.5	0.1	1	42	551	593	551	594	0.97

Sequence Information

Coding Sequence: ATGGAGACAGGTCGTTATTGGGGCGTGCACTACAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAACATGACGTCCGTATTCCATCAGCTTCTGCAGACGGAAGCCTTCGTGGACGTCACCCTGGCATGCAACGAAGCTTCCCTGAAGGCGCACAAGGTGGTGCTGTCAGCTTGCAGCTCGTATTTTCAAAAGCTGCTGTTGTCGAATCCCTGCAAGCACCCCACGATCATCATGCCACAAGACGTGTGCTTCAATGACCTCAAGTTCATCATAGAGTTCGTCTACAGGGGAGAGATCGACGTATCGCAAGCGGAACTTCAGTCACTGTTGAAGACGGCCGATCAGCTGAAGATCAAAGGTCTCTGCGAGGTGCCGGAAAGCAGAGACGGCCCACCCTCGGTGAGCCTGAGCTCGCCATCACGGGAACCAGGCACTCCTAGGATAAACTTCACCAAGCTAAAGCGTCACCATCCGAGGTACAAGAGGGCCAGAACCACGTTCGAGCCTCGCGCCACCGACTCCAGGCACTACGACAGGTACAAAGAGGAGGAGTCGAACGAGAACTACAATCGGGAGAACAAAGAGAACCACAGGGACTGGCAGGCCGAAGATGAAGATTGCGCGGAGGGAACAACGGCAGCAGTAGTCTTGGAAACTTGCCAgcgcaacaacaacaataacaacaacaacggtAACGGGACGAACAACAATAACAACGGCGACATGTTCTGTCACACAGGGCTCGGCCACTACGGCCACCATCCTGATCCTGGAGAGGTCGATCTGCCCCCAGAGACACAGCCCACGCCACCGAGCGCAACCTTGGTTGGCACCACGATCACCCATCTCAGAGATCCGGATCATCACTCTACAGAGATTCAGAACTGCGACAGCGTGAAGATAAAGTTCGAAACGTTGCACACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCGGACCGCGCGAGCGTTAGCTCGAAGAACGCGGCCGACAGCGACAACATGATGATGATCACGCCGGAGCTGCTCGGCCTGATGCCGTCTGGAAGCTCCGTTCACTCGGATTCCGGCGAGAACAACTCCAGGGGTCATTCCGGCCAGTCCAGCTCGCACCACCACGGCTCGAAATCGTGGACGCAGGAGGACATGGACGCGGCGCTGGAAGCCTTGAGGAACCACGACATGAGCCTCACGAAAGCCTCTGCGACCTTCGGCATACCATCGACGACCCTGTGGCAAAGGGCGCACCGGCTGGGGATAGACACCCCGAAGAAAGACGGTCCGACCAAGTCGTGGAGCGACGAGAGCCTGAACAACGCCCTCGAGGCTCTTCGGACTGGCACCATCTCCGCGAACAAGGCTTCGAAGGCGTTCGGCATACCATCCAGCACGTTGTACAAAATCGCTAGGAGGGAAGGGATAAGACTAGCCGCGCCTTTCAACGCCAGCCCGACCACCTGGTCGCCCGCTGACCTGGACCGTGCTCTGGAAGCGATCAGGTCCGGCCAGACGTCCGTGCAGAGAGCCTCCACGGAGTTCGGCATACCCACGGGGACGTTGTACGGTAGATGTAAGAGGGAAGGCATCGAGCTGAGCAGAAGTAACCCCACGCCTTGGAGCGAGGACGCCATGACCGAGGCCCTCGAAGCCGTCAGATTAGGGCACATGAGCATCAATCAAGCGGCTATTCACTACAATCTACCCTACTCCTCTTTGTACGGTCGTTTCAAGAGGGGGAAGTACGAGGAACCCGCCGTCGGCGACATATCCCAAGACGGAAGCAATCCGCATTTCCATCAGAGCCCCAGCCAGAACCATTCTACCGCCGTTCCCGATCAAATGCCTTACCAAGGCAGCTGA
Protein Sequence: METGRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPSREPGTPRINFTKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEESNENYNRENKENHRDWQAEDEDCAEGTTAAVVLETCQRNNNNNNNNGNGTNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGDISQDGSNPHFHQSPSQNHSTAVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00306165;
80% Identity: iTF_00085505;