Alep007367.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acronicta leporina
Gene Symbol
-
Assembly
GCA_947256265.1
Location
OX366515.1:5474835-5484037[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.0046 0.36 11.8 1.0 3 23 646 667 645 667 0.96
2 23 0.2 15 6.7 0.3 1 22 1053 1074 1053 1074 0.95
3 23 7.2 5.6e+02 1.8 0.4 1 22 1116 1137 1116 1139 0.82
4 23 0.00055 0.042 14.7 1.1 3 22 1150 1169 1148 1169 0.94
5 23 2 1.5e+02 3.5 0.1 3 23 1178 1199 1176 1199 0.89
6 23 0.017 1.3 10.0 0.2 3 23 1220 1241 1218 1241 0.96
7 23 0.0036 0.28 12.2 3.5 1 23 1247 1270 1247 1270 0.95
8 23 0.12 9.3 7.4 0.0 1 23 1296 1319 1296 1319 0.90
9 23 0.018 1.4 10.0 3.4 1 23 1324 1346 1324 1346 0.97
10 23 0.0083 0.64 11.0 0.2 1 23 1352 1375 1352 1375 0.95
11 23 0.0022 0.17 12.8 1.3 1 23 1388 1410 1388 1410 0.97
12 23 0.00017 0.013 16.3 1.8 1 23 1460 1483 1460 1483 0.97
13 23 0.0046 0.36 11.8 1.7 1 23 1543 1566 1543 1566 0.96
14 23 0.0023 0.18 12.8 2.1 2 23 1592 1614 1591 1614 0.95
15 23 0.11 8.5 7.5 0.1 2 23 1620 1642 1619 1642 0.93
16 23 0.0095 0.74 10.8 0.2 1 21 1685 1705 1685 1706 0.95
17 23 0.0004 0.031 15.1 1.0 1 23 1716 1738 1716 1738 0.93
18 23 0.00011 0.0083 17.0 0.3 2 23 1832 1854 1832 1854 0.93
19 23 1.3e-06 0.0001 23.0 1.4 3 23 1861 1881 1860 1881 0.98
20 23 0.022 1.7 9.7 0.2 1 23 1900 1922 1900 1923 0.95
21 23 0.18 14 6.8 0.0 1 23 1945 1967 1945 1967 0.97
22 23 0.026 2 9.4 0.6 1 23 1973 1996 1973 1996 0.95
23 23 0.00025 0.019 15.8 0.4 1 23 2004 2027 2004 2027 0.96

Sequence Information

Coding Sequence
ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTTGCTTCGAAAATCAAGGATTGTGTCTCTGTACAGATAAACGAAAATGACGACCTGCCTACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATATATTTAAAAATGTATGTGAAAGGACACAAAACAAACTACAGTCTCTGAAAGATGGCAGCCAACTAGAAGAGGTAAAAATTAAAAGTGAACCATTATCTGATGAAGCTTATGATGATGGAGTGGTCATTGATGGTTCATATCCTGTCAGTGAGAATGCTGGCTTGTCAAATAAATTGCAGCCTGAAGGCCCCCCAATCTTGGCTTCATTGGGGCTCACACCACGGAGTGATAAGAAATGTGTGGATCCTCGAATGGATTGGCATCGGGTCCATGCAATTTTGGACATGGTTCAAGATAATGAGGTAATTGATTCTCTACAAACAAAGGAAGAGTGTGATATTTTGCAACATTCTGACCATGACTCTGATACAGAGTCTGAACTCCAACCAGAAATTGATGATGATTTTGTTGATTGCAAAAGTGGATACATATGCAAAAATAAAAAAGTTATTTCTAAAGCCCCAAAACTATCAACTGCAGTAAATAACGCTAGAATCAAAGAATCTTTTAAACTCAGAAAACGTAAAACTGATTATAGTAAACATTTTTTAATACCTAAGAATGCATGGCAGTTGTTGTTCACTGATGACCTACTAGAATTGATTGTCGCTTCTACTAATGAAAATATCGTCACAAACGGGAAAGGTTTCTCAGAGACAACTAGCGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATTTGCACGGCATAATGCGGCCGACTCATCAGAAATGTGTTGACCTTTGGAACAATGAATGTGGGGTGCCTTGCATTAGAAATGTTATGACGTATGAAAGGTTCAAACTCTTGCTTCAAAATCTGAGTTTCGATAAAGAAGACGACGAAAGTATTATTCAATTCGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACATCTCACGAGATCGAGAATATCGTAGTTATTGATGAGATCATTGTGCCAGTTTACGGACCTTGCCCATTTCGATATGATATTGATAAGAAACCACTTAAGCGGGGTATAAAAATGGTGTTGCTTGTCGATTCATCTACATTCTATATGAGTAATTTGGATGTCATAACCGATCCTTACTTTGGCGCCGAAGAGACAACGAAGAAGTTGGTACAGCATTTAGCTGGAACTGGCAGATCGATTGTAATGGACAGTTGGTTTACCTCTTCTTCATTGACAGAAAGTCTTAAAAAAGAGTACCAATTGTATTCAATTGCAGCATTGAACCCAAATAGCGATATGATTCCACCGCTATTTCTTTCGCAATACAGGAAATGCCGAACATTCATGTCAGGATTTATTGATCATGAAGTATCACTCACATCTTATGTTAATACTGAAGGGAAATCGGTGAATGTGTTGACTAATGAGCCAAGGTATTACAGGAAAGGACATATAAATCACACTACAGTTGTATCAGTATATAAGAAGAATCAGTCTGCTGTAGAAGTTGTTGATGTTCTCATGAATTACTACACAACAATGCAACACACAAATGATTGGACTTTGTCTTTATTCTTTACATTGCTGAACATTGCTTCGGGAGGAGAGAGTGAAAACAATGAAGAAGACGAGGAAGAAATTAATGAGTCATCACAAACATTCCCGAAAATGCCGAACATGCCGGAGGTGTCTATTACAGTCATGAGGCCTACGGGTGAAACTCTGCATGCTCGCCAAGGCATTCATCAACTCGCTTCCAAAGACTGTCTCGTCTGCGGAAGATCCTACAGGTACTCACACAACGCCCGCCGACATGAACTTACTGCTCACAGTTTCGACAGGTACACAAACAAAATTACCCCCAAGAAAACACTCACTCATCTGCAACCTAAACTCAGACCCAACCCATTTAATCCCAAAGCACGGATGATGCCGAATCCTATTAGCCACAAGATGCAATTCATGAACAAGAATATCTCAACTAAAGTAATGCCCGTAAACAAAGTTATAACGCCACAGAAACCCATTCCAATAAAATCGTCAAAGACTACACAAAATAATTTACCTTATCCACTACGTATTAAAGCCCTCAAAGATTTACAAATAAAGAAGAAGGAGCCTCAGATTCTAAAGACTTTGTTGACTTCTAAACCTGAAGTTCTGGTATCAGAACCTGAGATACTAAATTCTGGCCCAGAAAGCCCGGAAACTTTGATATCCGAGCCGGAAATCGCGTCTTTCCAAGTCGAAGCTATTCTTACGGAACCTGATGCTGAGGCCTACGATCCACAGCAAGGTGACGAGGAAGCTGATGAGGAAACTCAAAATAACCAAAGTCAAAACTATGACACAGTGGACATGGATTCTGATAACGAAATTGAGATTGCGCGCCAGGAAGGCGTTGAACAGGAAGGCGAGGAGTATGCTGATGGGGAAGAGAATGTTGACCATTGTGATGAGGAGAACAATATAGAAGGCGCACAGAGCGATGTTGAAAAAGATGGTAATGACGATACAGTAGAAAGTCAGGAACCCATGGATCAAGAAGACGACAGCGTTGATATAAAACCTGAGGGAGAAGTGAAGGACGAAGAAGGTCAAGAGGAGGGAGAACCTGAAGAAAATGAGATAAATCATAATGAGAACGCAGAGGAAGACGATGACGACCTTCCGATATCATTGGCGCCAGTCGTTGAAATTAACGAAGGCTTGCAAGCCAACTCCTTTAACAGCGAAGTCAATGAAGGGGAAGAAGAACTTGACGAAACCGCCGATCCCGATGAAACAGTTGAAGACGAGGAACAGGTGAAAGAACTCGACCCTGACAAAACATACGTTACAAAAACCCAAAGAGACTTTATTCATAAATATCGCGACATCATTCAGCAAATTAATACGAAGCGTTGTTTATGTTGCGACCGGGAACATCCCCGCAGAAAAGCTGTCATCCAGCACTTACAGAAAAATGGGCACAAAGTCCCTAAACATACATGTTACAACTGTGTAATCACATTCGGACACATTGGCGCTCTTCTAAGCCACATGAGGTCAAACTCCTGCACTAATTTGTGGAAAATTATTTACAATGAAAATGGCATTACTGATGACTTGGTTCTGGAAGATGAGCCGAAAGAGGTCAAGGTTCAATATAAGGATATTTTCAATGCTAGATCTTATGCATGCAAACTCTGCCCAGCTAAGTTCCAACTGAAACAGTTTATAATGAAGCATGTTCTAGATACCCATGAGGACGGACAGTCCAGGGTTATGCTGGCTTGTGTGCACTGCCGTGCTCGATTCAAAGATAAAAGTCTACTAAAAAAACACATTCGTAAAGGCGAATGTGTAGTGTACATTGCTTGCGATTTGTGCACAGAAAAGTTCGGTAATATGCAGGACTTCAACGATCACGCTTTAGCTGTTCACGCTGGCAGTTTCGATCAGTCGGAAAATCAGAGCAAATGTGTTGACGGCCGACCAACTGACTGTCCGTTGTGTGGCAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATACACAGTGAGGAGAAACCACATTACTGCCAGCATTGCGATTCGAAATTCGAACAGGCTACTGATCTAAACAAACACATTTACATGGAGCATTCCGACAGAACGTTAGGCATGTCAACCGCCGAACCGGATATGTCAATTGTAAAAGAAGAAGCAGAAGAATACCATTACTCGTGTACGGAATGTAATGCCATATTCGAAACTGTCGACGCGTGGACTGATCACCAAGTAGCCGAACATAACCAAGTGGCCCACCACTGTGACCAGTGTGAGAAGAAGTTCCTTCGTCCTTCCGAACTCGCGGAGCACAAAAATACTCACTTGAGAGTCAAATTCTATCCTTGTAGTGTATGCCCGAACTCGTACAGCACTCCACAGAAACTATCCGAGCATGTGCAGCAGTCTCATCCCGGTATTGGCACGGTTGCGGCAGCCGAGACAGAATTCTTCTGCGACATCTGCATCAGATCATTCAAAAGCCGCCAAGCTTATTCAAATCACATGCGTATTCACGCTAAAGTACCTACGACTAACAGAAAACCGGGAGAAATTAAAAGCACATTTACGCCTCAAATTATCGGGAAACCAATCAAACAATATCCTATGGTTCAACCTGGATTTGTGTCGTTTAAGCCTAATTATAATATCCCTAATGCTCCCTATTCATGTGACATTTGCGGCAAAGGATTTATGCACAAGAAGAATATCTGGAAACACAAAAAAGTGTTGCATGCTGATATTTTAGTTGATAGACATGATAGTGAAGAGAATACCATGCAAGCTTCCACTGAAGAAGAAGAATTCAACCCTGATGAAAACGGCGCTGTTCTGTCAACACCACAATTTAATAGTTTTAATTTTACAAACTTCCCAAATAATGTACAACAAACGCCACAAGAAACAATGCCTTACTCGTGTGAATTATGTTTCAAAAGATTCCCGCTTAGGACCAGTTTGTGGAAACACAAACGCGCTAAACACGGAATCGTTAACCCTAGCACTAGCGGTAATGAGATTTCCCAGCCGTCGGCTAGCGGTGAAGGAAGTAGTAGGTCTAGTTGCACTATATGTCGAATTACGTTTTCAGATAAGAAGTCATACTATCGCCACCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAATTATGTGGCAAACCTCTAAGTTCTACCTTGGAGCTATACGAGCATTTGAAGGCGGCTCACGCTAGGGAACTCTTGGGCTATAATGCCAATCAAGGCTCCAGCAAATCTCAAGATATGACACAAGAAGAACCCGATTATGATAATGATCAGGAGTCTGTTGATCCCAGCGTCGATTACCAAGCCCGTTACCCGTGCGATACTTGTGGCAAGCAATTCGTTGGTTTGCTAGCATTACAAAACCACCAGTGCATCAATCAGTTGCCATCACAACCACAGACCTTCGACTGTGAGATTTGTCACAAGAGTTACACTTCAATATCTGCATTAAAAAGCCATCGTGGCTGGCATTTGCGGTCGCCCGATGGAAAAGCAGCGGCCAACAATTCTGGGCTTTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGCAAACATGAAGTTATCGACCCCTCTCAACTTGCTAAAGTCACACATACACCTGCTCCTCCTGCTCCTGCTAGCGCAGCCGTAGCGAAAAGAAGACTACCGCCAGAGGTCGAAGTCACAGTTGTAAATCCAAACAAAAAAATGCGGTCAGACGATTCCGTGGAGTTAGATCCACAAAATTCTGGTTCAATGGAGGATAGGTACTGTACGATTTGTGACAAAGAGTTCACAAAACGAGCGGCATATCAGCGCCACATGGACGAAGTACATCAACCGAACTCCGTGTTCTGTCCGGTCTGTGAAAAGAGTTTCACTAGGAAGTCCACATTGCTTATTCACATGAAAAAGCATTATGAAAGTGGTGAAGGCAGTTCTTCTGCTACAGGTCAAGGGGATGATGATATGTTCTCTTGTGACTTGTGTGGCGCTCAGTATGATAGTGACGAAGCGCTGAGGGCGCACCGGGCAAGGCACCACGGAGAAGATGAGTCGGGAGAAGAGAGTGACGACGGGAATGTTCCTATTGCTCAGCCTGGCGAATTTACATGTGCGCAGTGTGGCGACGGCGTGGCTACACCCAGAGACCTTATAGCCCACCGCACAATGCACGCTACTCCCACCAAATTCTTCTGTAACATATGCAAAGTGTACTTTGCTCGGGCGCTTGATCTCTCCTCGCACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTTCCGTGTGCCATGTGCGACAGGTTTTATATGAACAAGAAAAGTTTGCAACGGCACATTGAGATGGCCCACTGA
Protein Sequence
MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHIFKNVCERTQNKLQSLKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPVSENAGLSNKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDILQHSDHDSDTESELQPEIDDDFVDCKSGYICKNKKVISKAPKLSTAVNNARIKESFKLRKRKTDYSKHFLIPKNAWQLLFTDDLLELIVASTNENIVTNGKGFSETTSVSEIKTLIGILYLHGIMRPTHQKCVDLWNNECGVPCIRNVMTYERFKLLLQNLSFDKEDDESIIQFDIMKRMRKVFEIFAMNCRTSHEIENIVVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAEETTKKLVQHLAGTGRSIVMDSWFTSSSLTESLKKEYQLYSIAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSVNVLTNEPRYYRKGHINHTTVVSVYKKNQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASGGESENNEEDEEEINESSQTFPKMPNMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLTHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNISTKVMPVNKVITPQKPIPIKSSKTTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDAEAYDPQQGDEEADEETQNNQSQNYDTVDMDSDNEIEIARQEGVEQEGEEYADGEENVDHCDEENNIEGAQSDVEKDGNDDTVESQEPMDQEDDSVDIKPEGEVKDEEGQEEGEPEENEINHNENAEEDDDDLPISLAPVVEINEGLQANSFNSEVNEGEEELDETADPDETVEDEEQVKELDPDKTYVTKTQRDFIHKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVMLACVHCRARFKDKSLLKKHIRKGECVVYIACDLCTEKFGNMQDFNDHALAVHAGSFDQSENQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQATDLNKHIYMEHSDRTLGMSTAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGTVAAAETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEIKSTFTPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFNFTNFPNNVQQTPQETMPYSCELCFKRFPLRTSLWKHKRAKHGIVNPSTSGNEISQPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKLCGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDMTQEEPDYDNDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTPAPPAPASAAVAKRRLPPEVEVTVVNPNKKMRSDDSVELDPQNSGSMEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCEKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDMFSCDLCGAQYDSDEALRAHRARHHGEDESGEESDDGNVPIAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01062082; iTF_01117572; iTF_00746021; iTF_00758469; iTF_00042854; iTF_00973991; iTF_01252039; iTF_00007331; iTF_01083559; iTF_00785384; iTF_00810312; iTF_00809383; iTF_00274605; iTF_00273813; iTF_01027560; iTF_00888505; iTF_01538984; iTF_00301418; iTF_00869866; iTF_01063050; iTF_00685687; iTF_01152395; iTF_00932908; iTF_00931734; iTF_01377708; iTF_00018368; iTF_01535148; iTF_00447463; iTF_00952905; iTF_01534161; iTF_00425677; iTF_00906381; iTF_00712174; iTF_00282639; iTF_01333063; iTF_00281611; iTF_00677881; iTF_01230864; iTF_01441296; iTF_00375560; iTF_00449482; iTF_01030449; iTF_01526322; iTF_00037075; iTF_00177395; iTF_00445427; iTF_01339251; iTF_01340462; iTF_01532339; iTF_01533268; iTF_00327252; iTF_00186486; iTF_00185507; iTF_01221817; iTF_00783732; iTF_01064885; iTF_00667766; iTF_00952054; iTF_00122647; iTF_01527575; iTF_00831448; iTF_01192952; iTF_00000538; iTF_00001357; iTF_00238010; iTF_00623386; iTF_01285754; iTF_00772225; iTF_01247362; iTF_00041091; iTF_00302371; iTF_00039077; iTF_00111878; iTF_00121670; iTF_01119591; iTF_00907240; iTF_00124490; iTF_00147818; iTF_01260330; iTF_00726700; iTF_01094254; iTF_00928913; iTF_00172050; iTF_00908146; iTF_01440322; iTF_00173444; iTF_00300468; iTF_00120758; iTF_00123577; iTF_00374457; iTF_01084473; iTF_01095161; iTF_00038043; iTF_00043771; iTF_01085628; iTF_01118589; iTF_00364254; iTF_00450367; iTF_00071712; iTF_01093344; iTF_01342400; iTF_01063965; iTF_00050143; iTF_00041984; iTF_01425312;
90% Identity
iTF_00758469;
80% Identity
-