Ppyg007243.2
Basic Information
- Insect
- Protodeltote pygarga
- Gene Symbol
- -
- Assembly
- GCA_936440985.2
- Location
- CAKZFI020000054.1:3511709-3520820[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0063 0.37 11.5 1.1 3 23 742 763 741 763 0.96 2 23 0.38 22 5.9 0.3 1 22 1150 1171 1150 1171 0.95 3 23 8.4 4.9e+02 1.7 0.4 1 22 1213 1234 1213 1236 0.82 4 23 0.0039 0.23 12.2 4.0 2 22 1246 1266 1245 1266 0.93 5 23 0.25 14 6.5 0.3 2 23 1274 1296 1273 1296 0.90 6 23 0.02 1.2 10.0 0.2 3 23 1317 1338 1315 1338 0.96 7 23 0.0042 0.24 12.1 3.5 1 23 1344 1367 1344 1367 0.95 8 23 0.14 8.2 7.3 0.0 1 23 1393 1416 1393 1416 0.90 9 23 0.0062 0.36 11.6 3.5 1 23 1421 1443 1421 1443 0.97 10 23 0.0097 0.57 10.9 0.2 1 23 1449 1472 1449 1472 0.95 11 23 0.0026 0.15 12.7 1.3 1 23 1485 1507 1485 1507 0.97 12 23 0.0002 0.012 16.3 1.8 1 23 1557 1580 1557 1580 0.97 13 23 0.0054 0.31 11.8 1.7 1 23 1639 1662 1639 1662 0.96 14 23 0.0027 0.16 12.7 2.1 2 23 1688 1710 1687 1710 0.95 15 23 0.098 5.7 7.8 0.1 2 23 1716 1738 1715 1738 0.93 16 23 0.011 0.65 10.8 0.2 1 21 1782 1802 1782 1803 0.95 17 23 0.00047 0.028 15.1 1.0 1 23 1813 1835 1813 1835 0.93 18 23 0.00013 0.0073 16.9 0.3 2 23 1928 1950 1928 1950 0.93 19 23 4.4e-07 2.6e-05 24.6 1.4 3 23 1957 1977 1956 1977 0.98 20 23 0.046 2.7 8.8 0.2 1 23 1996 2018 1996 2019 0.95 21 23 0.21 12 6.8 0.0 1 23 2041 2063 2041 2063 0.97 22 23 0.031 1.8 9.4 0.6 1 23 2069 2092 2069 2092 0.95 23 23 0.00029 0.017 15.8 0.4 1 23 2100 2123 2100 2123 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAACCTCCCGTCCTTGCTTCGAAAATCAAGGATTGTGTGTTCATACAGATAAAAGAAAATGACGGCCTGCCCAGTAATGTCTGCAGGAAATGCATGGACAATGTCAATAATTGGCATGTTTTTAAAAATGTATGTGAAAGGACACAAAACAAACTACTGTCTCTAAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAGCCTTTATCTGATGAGGCATATGATGATGGAGTGGTTATTGATGGCTCATATCCTGGCATTGAGAATGCTGCGTCAAACAAATTGCAACCTGAAGGGCCCCCAATCTTGGCTTCATTGGGGCTCACACCTAGAAGTGATAAGAAATGTGTGGACCCTCGCATGGATTGGCACCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTACAGTCCAAAGAAGAATGTGATGTTTTGCAACATTCTGATCATGATTCTCAATCAGAGGCTGAACTCCAAGCAAATATAAATGATGATTTCGTTGATTGTAGAGGTGGCTACTTATCCAAAAATAAAAAACTTTTATTAAAAAATCCTAAACTTACTACATCTGAGAATAATATCAGAATTAAAGAAGCTTTTAAACTGCGGAAACGTAAAGCTGATGGTCGTAAACATTATCCGAACCCTAAAAATGCGTGGCAGTTGTTATTTACCGATGACCTACTGGAATTGATTGTCACATCAACTAATGAAAATATCGTGACGAATGGGAATAGTTTCTCGGAGTCGACAACCGTCTGTGAAATAAAAGTGCTTATCGGCATTTTGTATTTGCACGGCATAATGCGGCCAACTCATCAGAACTGCGCTGACCTTTGGAACAGTGAATGTGGTGTACCATGCATTAAAAATGTCATGAAATATGAAAGGTTTAAATTCTTGCTTCAAAACATCTGTTTCGATAAAGAGGACGATGACAGTATTATACAGTTTGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACATCTCACGAGATCGGGAATATTGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGTCCTTGCCCATTTCGATATAATATTGATGAGAAGCCGTTGAAACGGGGTATAAAGGTGGTCCTGCTTGTTGACTCATCTACGTTCTATATGAGTAATTTAGATGTCATTACTGATCAGTATTTCGGTGCTGCAGAAATTACGAAAAAATTAGTTCAGCATTTGGCCGGATCTGGTAGATCTATTGTAATGGATAGTTGGTATACATCTTCTAGGTTAATGAGCAGCCTCAAAAATGAGTACCAGCTGTATTGTATTGCAGCTTTGAACCCAAACAGTGACTTGATTCCACCTCTTTTTGTGTCACAATATCGGAAGAGTCGAACATTTATGACTGGGTTTATTGATAATGAGGTTTCACTTCAATCTTACGTCAACTCTGAAGGAAAATCAGTGAATGTAGTAACAAATGAGCCGAGATATTATAGGAAAAGTCATGGGAATCATACTACTGTCGTATCTGTGTATAAGAAGAATCAATCTGCTGTGGAAGTTGTTGATGTTCTCATGCACTACTACACTACGATGCAACACACAAATGATTGGACATTGTCTTTATTCTTTGCTTTGCTAAACATTGCCACAGTCAACGCTCAAGTTATTTGGTGCTCTCAGAATATGAATGTAACTCAGCGTCGCACATTTATCAAAGATTTGGCTTTAAGCCTATTAGAACAAGATGAGCAACGGATTTCAATATCTCCTATACCAGATTTAGAGGGAAGGAAAAAGAAATTTGCCTCGGTCGCGGGTTCTTTGCAGGGATATTATAAAAACAGGAGACGGTGCAAAATTTGTGTGAAAACTACTAAAAGGGACAGGAGAACTAAACAGTTCTGTGTTAAATGTGGCCTATTTATTTGTAAAGAGCATTCTGGGGCGGAGAGCGAAAACAATGAAGAAGACGAGGAAGAAATGAATGAGCCCGCTCAAACATATCCAAAGGTACCGCACATGCCTGAGGTGTCTATCACGGTTATGAGGCCTACTGGTGAAACCCTGCACGCTCGCCAAGGAATTCACCAACTCGCCTCCAAAGACTGTCTTGTCTGCGGTCGCACCTACAGGTACTCACACAACGCCCGCCGACATGAGCTCACGGCTCACAGCTTCGACAGATACACCAATAAAATAACTCCTAAGAAAACACTTAATCACCTACAACCAAAACTTAGACCTAATCCATTCAACCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCATCTCATGAACAAGAACATCTCAGCAAAAATATTACCTGTAAACAAAGTTATAACGCCGCAGAAGCCTATTCCAATTAAGACTTCAAAGAGTCATCATAATAATTTACCTTATCCTCTGCGCATCAAAGCGCTCAAGGATTTACAAATTAAGAAAAAAGAACCACAGATTTTAAAGACTTTATTAACCTCTAAACCAGAAGTTCTAGTGTCTGAACCTGAAATACTAAATTCTGGTCCAGAAAGTCCAGAAACATTGATATCAGAGCCAGAGATTGCATCTTTTCAAGTCGAGGCTATTCTTTCTGAACCTGATGCCGAAGCTTACGATGCACAGCCAGGTGATGATGATATTGATGGAGAAATGGAAAACAATCAAAGTCAAAACTACGACACAGTTGACATGGACTCTGACAACGAAATTGAGATTGCTCGTCAGCAAGGTATAGAGCAAGAAGGTGATGAGAATGCTGACGGGGATGAAAATATGGAACAAGATGACGAAAATAATATGGAAGGCGGTCAGAGTGACAATGAAAAAGATGGCAACGATGACACAGCAGAAAGTCAGGAAAACATTGAAGGGGATGATGGTGTTGATATTAAAACTGAAAGTGAAATGAAGGATGGTGAGGAAGGCCAAGAAGAAAGAGATCCTGACGACATGGAGATGAATAATGATGAAAATGAGGAAGAGGACGAGGATGATCTTCCAATATCTTTGGCGCCGGTTGTTGAGATAAACGAGGATTTGCAAGCTAACTCATTAAATAGTGAAGTGAATGAAGAAGAAGAAGATCAGGAACTTGACGAGACCGCAGATCCTAACGATACCGTTGATGACGAGGATCAAATCAAAGAACTTGACCCTGATAAAACATATGTTACTAAAACGCAAAGGGACTTCATACAAAAATACCGCGACATCATCCAACAAATTAATACCAAACGATGTCTATGTTGTGACCGCGAACACCCGCGCAGAAAAGCAGTTATACAACACTTGCAGAAAAATGGACACAAAGTTCCAAAACATACTTGCTACAACTGTGTTGTCACATTCGGACATATCGGCGCTTTACTTAGCCATATGAGGTCAAATTCTTGTACCAATTTGTGGAAGATTATCTACGAAGAAAACGGTATTACTGATGACTTAGTTCTGGAAGATGAGCCTAAAGAGGTCAAGGTTCAATATAAGGATATTTTCAATGCTAGGTCATACGCTTGCAAGCTATGCCCGGCTAAGTTCCAACTGAAACAGTTTATAATGAAACATGTATTAGATACCCATGAAGATGGACAATCTCGGGTACCATTGTGTTGTGTCCACTGCCGAGCTCGGTTCAAAGACAAGAGTCTACTAAAGAAACACATTCGTAAAGGTGATTGCACAGTTTATATTTCTTGTGATTTGTGCTCCGAAAAGTTCGCACACATGCAGAACTTCAATGATCACGCTCTAGCTGTCCACGCCGGCAGTTTCGATCAGTCGGATAATCAGAGTAAATGTGTTGACGGTCGGCCTACTGACTGTCCGCTGTGTGGTAAGAAAAACAGCAGCTATCCGAATTTAGTAAAACATTTAAAGATTATACATAGTGAGGAAAAACCTCATTACTGCCAGCATTGCGACTCTAAATTCGAACAAGCTACTGATCTTAACAAGCACATTTACATGGAGCATTCTGACAGAACATTAGGCATGTCTACGAATGAACCAGATATGTCAATTGTAAAGGAAGAAGCAGAGGAGTACCATTATTCGTGTACTGAATGTAATGCCATATTTGAAACTGTCGATGCATGGACAGATCATCAAGTGGCTGAACATAATCAAGTGGCCCACCACTGCGACCAGTGTGACAAGAAATTCTTACGTCCTTCTGAGCTCGCCGAACATAAGAACACTCATTTGAGGGTCAAATTCTACCCTTGTAGTGTATGCCCTAACTCTTATAGTACTCCTCAAAAACTGTCTGAGCATGTACAACAATCACATCCCGGAGCTGGCGCTGTTGCAGGAGGCGAATCAGAATTCTTCTGCGACATTTGTATCAGATCATTCAAAAGTCGCCAAGCATATTCAAATCATATGCGAATTCACGCTAAAGTACCTACTACTAACAGGAAACCAGGTGAAATTAAAGTAGGGTTCACACCTCAAATAATAGGAAAACCTATCAAACAATATCCTATGGTTCAACCTGGATTTGTTTCATTTAAACCAAATTACAATATTCCTAATGCTCCATACTCATGTGATATTTGTGGCAAAGGTTTCATGCATAAGAAAAATATTTGGAAACACAAGAAGGTGCTGCATGCCGACATTTTAACTGACAGACATGATAGTGAAGAGAATACTATGCAAGCTTCCACTGAAGAAGAGGAGTTTAATCCAGATGAGAATGGCGCTGTTCTCTCAACACCACAATTTAATAGTTTTAACTTCACTAATTTCCCGAATAATGCACAACAGACTCCAACAGAAATGCCTTATTCGTGTGAGCTATGCTTCAAGCGGTTTCCGCTTAGGACAAGTTTGTGGAAACACAAACGCGCTAAGCATGGAATTGTTAATCCTAGCACCAGCGGCAATGACACATCAACACAATCTGCAACCGGCGAGGGCAGTAGTAGATCTAGTTGCACAATATGCAGAATCACGTTTTCAGACAAGAAATCTTATTATCGCCACCGAAAGAATGTCCATAAATCCACTGTTCAAATGTGCAAAATATGCGGTAAACCATTAAACTCTACCTTAGAGCTATACGAACATTTGAAGGCCGCTCACGCTAGAGAATTACTAGGCTATAATGCTAATCAAGGCTCTAGTAAATCACAAGACATTTCACAAGATATGGATCCTGATTATGAAAATGACCAGGAGTCTGCTGATCCCAGTGTGGATTACCAAGCACGTTACCCTTGCGACACGTGTGGCAAACAATTTGTTGGTTTACTGGCATTACAGAATCATCAGTGCATTAATCAGATTCCATCGCAACCACAGACATTTGACTGTGAGATTTGTCACAAGAGCTACACTTCAATATCTGCGTTAAAGAGCCATCGCGGGTGGCATTTGCGTTCGCCCGACGGAAAAGCGGCCGCTAATAATTCTGGGCTTTGGATGCCTCAGCACAAAGTTACTAGCAAGATTAGCAAACATGAAGTAGTTGACCCGTCCCAACTAGCCAAAGTCACGCACACTCCTGTCCCGACCCCCACTACTGCTAGTGTAGCGAAAAGAAGACTACCACCGGAAGTCGAAGTGACAGTTGTGAATCCAAACAAGAAATTGCGCTCTGACGATTCAGTCGAGCTGGACCAACAAAATTCTGGCTCAATCGAGGATAGGTACTGTACGATTTGTGACAAAGAGTTTACAAAACGAGCAGCGTATCAACGCCACATGGACGAGGTACATCAACCAAACTCTGTGTTCTGTCCAGTTTGTGATAAGAGTTTTACAAGGAAGTCTACGTTGCTTATTCACATGAAGAAGCACTACGAGAGTGGTGAAGGCAGTTCTTCAGCTACTGGTCAGAATGAGGATGATATGTACGCTTGTGACTTGTGTGGCGCTCAATATGACAATGATCAGGCGCTGAGGGCACATCGAGCGAGGCACCACGGGGAAGACGAATCAGCAGAAGAGAGCGACGACGGCAACGTTCCTGTGGCACCTCCTGGAGAGTTTACATGCGCACAATGTGGAGATGGCGTTGCAACTCCACGGGACCTTATCGCCCACCGCACAATGCACGCTACCCCCACCAAATTCTTCTGTAATATTTGTAAAGTGTATTTCGCTCGAGCGTTGGACCTATCCTCACACACTCGCGCGCGACACGCTGACAACGAAAAAGTTTTCTTCCCTTGTGCCATGTGCGACAGATTTTACATGAACAAGAAGAGTTTGCAGCGGCACATTGAAATGGCTCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSSDDTEPPVLASKIKDCVFIQIKENDGLPSNVCRKCMDNVNNWHVFKNVCERTQNKLLSLKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPGIENAASNKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQSKEECDVLQHSDHDSQSEAELQANINDDFVDCRGGYLSKNKKLLLKNPKLTTSENNIRIKEAFKLRKRKADGRKHYPNPKNAWQLLFTDDLLELIVTSTNENIVTNGNSFSESTTVCEIKVLIGILYLHGIMRPTHQNCADLWNSECGVPCIKNVMKYERFKFLLQNICFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHEIGNIAVIDEIIVPVYGPCPFRYNIDEKPLKRGIKVVLLVDSSTFYMSNLDVITDQYFGAAEITKKLVQHLAGSGRSIVMDSWYTSSRLMSSLKNEYQLYCIAALNPNSDLIPPLFVSQYRKSRTFMTGFIDNEVSLQSYVNSEGKSVNVVTNEPRYYRKSHGNHTTVVSVYKKNQSAVEVVDVLMHYYTTMQHTNDWTLSLFFALLNIATVNAQVIWCSQNMNVTQRRTFIKDLALSLLEQDEQRISISPIPDLEGRKKKFASVAGSLQGYYKNRRRCKICVKTTKRDRRTKQFCVKCGLFICKEHSGAESENNEEDEEEMNEPAQTYPKVPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMHLMNKNISAKILPVNKVITPQKPIPIKTSKSHHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDAEAYDAQPGDDDIDGEMENNQSQNYDTVDMDSDNEIEIARQQGIEQEGDENADGDENMEQDDENNMEGGQSDNEKDGNDDTAESQENIEGDDGVDIKTESEMKDGEEGQEERDPDDMEMNNDENEEEDEDDLPISLAPVVEINEDLQANSLNSEVNEEEEDQELDETADPNDTVDDEDQIKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYEENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRARFKDKSLLKKHIRKGDCTVYISCDLCSEKFAHMQNFNDHALAVHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQATDLNKHIYMEHSDRTLGMSTNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGAGAVAGGESEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEIKVGFTPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILTDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFNFTNFPNNAQQTPTEMPYSCELCFKRFPLRTSLWKHKRAKHGIVNPSTSGNDTSTQSATGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQDISQDMDPDYENDQESADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDPSQLAKVTHTPVPTPTTASVAKRRLPPEVEVTVVNPNKKLRSDDSVELDQQNSGSIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQNEDDMYACDLCGAQYDNDQALRAHRARHHGEDESAEESDDGNVPVAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00017541;
- 90% Identity
- -
- 80% Identity
- -