Basic Information

Insect: Lymantria dispar
Gene Symbol: -
Assembly: GCA_032191425.1
Location: CM063444.1:27710196-27720633[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0058 0.69 11.9 1.0 3 23 582 603 581 603 0.96

2 23 0.41 49 6.0 0.3 1 22 982 1003 982 1003 0.95

3 23 9 1.1e+03 1.8 0.4 1 22 1045 1066 1045 1068 0.82

4 23 0.004 0.48 12.4 1.1 3 22 1079 1098 1077 1098 0.94

5 23 0.94 1.1e+02 4.9 0.0 3 23 1107 1128 1105 1128 0.85

6 23 0.021 2.5 10.1 0.2 3 23 1148 1169 1146 1169 0.96

7 23 0.008 0.96 11.4 3.3 1 23 1175 1198 1175 1198 0.95

8 23 0.15 18 7.4 0.0 1 23 1224 1247 1224 1247 0.90

9 23 0.0066 0.79 11.7 3.5 1 23 1252 1274 1252 1274 0.97

10 23 0.16 19 7.3 0.8 1 23 1280 1303 1280 1303 0.95

11 23 0.016 1.9 10.5 1.0 1 23 1316 1338 1316 1338 0.97

12 23 0.00021 0.025 16.4 1.8 1 23 1392 1415 1392 1415 0.97

13 23 0.0044 0.53 12.2 1.9 1 23 1475 1498 1475 1498 0.96

14 23 0.0028 0.34 12.8 2.1 2 23 1523 1545 1522 1545 0.95

15 23 0.047 5.6 9.0 0.1 2 23 1551 1573 1550 1573 0.94

16 23 0.012 1.4 10.9 0.2 1 21 1617 1637 1617 1638 0.95

17 23 0.0005 0.06 15.2 1.0 1 23 1648 1670 1648 1670 0.93

18 23 0.00013 0.016 17.0 0.4 2 23 1760 1782 1759 1782 0.93

19 23 4.7e-07 5.7e-05 24.7 1.4 3 23 1789 1809 1788 1809 0.98

20 23 0.018 2.2 10.3 1.8 1 23 1828 1850 1828 1851 0.95

21 23 0.14 17 7.5 0.0 1 23 1874 1896 1874 1896 0.97

22 23 0.033 3.9 9.5 0.6 1 23 1902 1925 1902 1925 0.95

23 23 0.00039 0.047 15.5 0.7 1 23 1933 1956 1933 1956 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0058	0.69	11.9	1.0	3	23	582	603	581	603	0.96
2	23	0.41	49	6.0	0.3	1	22	982	1003	982	1003	0.95
3	23	9	1.1e+03	1.8	0.4	1	22	1045	1066	1045	1068	0.82
4	23	0.004	0.48	12.4	1.1	3	22	1079	1098	1077	1098	0.94
5	23	0.94	1.1e+02	4.9	0.0	3	23	1107	1128	1105	1128	0.85
6	23	0.021	2.5	10.1	0.2	3	23	1148	1169	1146	1169	0.96
7	23	0.008	0.96	11.4	3.3	1	23	1175	1198	1175	1198	0.95
8	23	0.15	18	7.4	0.0	1	23	1224	1247	1224	1247	0.90
9	23	0.0066	0.79	11.7	3.5	1	23	1252	1274	1252	1274	0.97
10	23	0.16	19	7.3	0.8	1	23	1280	1303	1280	1303	0.95
11	23	0.016	1.9	10.5	1.0	1	23	1316	1338	1316	1338	0.97
12	23	0.00021	0.025	16.4	1.8	1	23	1392	1415	1392	1415	0.97
13	23	0.0044	0.53	12.2	1.9	1	23	1475	1498	1475	1498	0.96
14	23	0.0028	0.34	12.8	2.1	2	23	1523	1545	1522	1545	0.95
15	23	0.047	5.6	9.0	0.1	2	23	1551	1573	1550	1573	0.94
16	23	0.012	1.4	10.9	0.2	1	21	1617	1637	1617	1638	0.95
17	23	0.0005	0.06	15.2	1.0	1	23	1648	1670	1648	1670	0.93
18	23	0.00013	0.016	17.0	0.4	2	23	1760	1782	1759	1782	0.93
19	23	4.7e-07	5.7e-05	24.7	1.4	3	23	1789	1809	1788	1809	0.98
20	23	0.018	2.2	10.3	1.8	1	23	1828	1850	1828	1851	0.95
21	23	0.14	17	7.5	0.0	1	23	1874	1896	1874	1896	0.97
22	23	0.033	3.9	9.5	0.6	1	23	1902	1925	1902	1925	0.95
23	23	0.00039	0.047	15.5	0.7	1	23	1933	1956	1933	1956	0.96

Sequence Information

Coding Sequence: atgaatgtGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCGCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCCGATGACTCTGAACCTCCCGTCCTCGCTTCGAAAATCAAGGATTGTGTGTCTGTACAGataaatgaaaatgatgaaCTGCCCACAAATGTCTGCAAGAAATGCTTGGACAATGTCAATAATTGgcacatatttaaaaatgtatgtgaAAGGACACAAAACAAACTACAGTCTCTGATTGCCAAAGATGGCAGCCAACTAGAAGAGGTGCAAATAAAGAGTGAACCCTTGTCTGATGAAATCTATGATGATGGAGTGGTCATTGATGGGTCTTATCCTGACAGTGAGAATACCAATATGGCAAACAAAGTTCAGCCTGAAGGCCCTCCAATATTGGCTTCATTGGGGCTTACACCTAGGAGTGATAAGAAATGTGTCGATCCACGAATGGATTGGCATCGGGTACATGCAATCTTGGACATGGTTCAAGAAGACGATGTGATTGACTCCCTGCAATATAAAGAAGAGTGTGATGTATTGCAACAATCTGATCATGATTCTGACACAGAGGCTGAACTCCAACCAGACATTGACGATGAATATGTCGATTGCAAAAATGGctatatatgtaaaaataataaaatcctgTCAAAACATCCCAAAGTGTCCCTATCTATGAATAACATTAAGATCAAAGAAGTAATTCATCTCAGAAAAAGTAAAACAAGCTTACTTAAACCACATTGTCCGCGACCTAAAAATGCTTGGCAATTGCTATTCACTGATGACCTACTAGAATTGATCGTCACATCTaccaatgataatattttaaaaaatcataatacTAATTCAATTATAACCAACGTCAGCGAAATTAAAACGCTTATCGGTATTTTATATATGCATGGTATAATGCGGCCGACGCACCAGAAGTACAGTGACCTTTGGAATGGCAAATGTGGAGTACCTTACGTTATAAGCGCAATGAAACACGAAAGATTTCAATACCTTCTTCAAAATATAAGCTTCGATAAGGAAGACGGCGATAGTATTATACAATTCGATATTATGAAACGTATGCGTAAAGTATTTGAAATCTTTGCCATGAATTGTAGAACAGCTCACAACGTTGAGAATATTGTGGTTATTGATGAGATCATTGTGCCAGTTTACGGCCCTTGCCCATTTCGGTATAATATTGATAAGAAACCGCTAAAACGTGGCATAAAAATGGTATTGCTTGTTGATTCCTCAACATTCTATGTGAGCAATTTAGATGTAATTACTGATCGCTATTTTAGTTCCGAAGAGATAACTAATAAGTTAGTACAACATTTGGCTGGTACAGGTAGAACAATTGTTATGGATAGTTGGTATACATCATTTTCATTAATAGAACGCCTCAAGAATGATTATCAGCTATTTTCTATAGCGGCATTGAATCCTAACAGTGATTGGATACCACCATTATTTTGTTCTCAGTATAGAAAAACTAGAACATTTATGTCTGGGTTTATCGATGAAGATGTTTCTCTAACATCATATGGCGTGGAGAGTGAAAAGGATGAGGAagaggaggaggaggaggaagatgaaatgaatgaacctcTTCAACCAATGCCAAAAGTGCCTCACATGCCTGAGGTGTCCATAACGGTAATGCGGCCAACAGGAGAAACTCTGCACGCGAGACAAGGCATTCACCAACTAGCTTCTAAAGATTGTCTTGTTTGTGGTCGTTCCTATAGATACTCCCACAATGCTCGTCGCCACGAACTTACTGCTCATAGTTTTGACAGGTACACAAACAAAATAACTCCCAAGAAACCATATCCGTCTTTTCAACCCAAATTAAGGCCGAATCCATTTAACCCAAAAGCGCGGTTGATGCCGAACCCTATTAGCCATAAGATGCAATTCATGAATAAAAATATCCCAGCGAAAATCGTTCCAATGAACAAAGTTATTACGCCTCAGAAACCAATACCAATAAAATCGGCAAAACCACCACAAAATAATTTGCCGTATCCCCTCCGTATAAAAGCTCTCAAAGACTtgcaaataaagaaaaaagaacCACAAATTTTAAAGTCACTGTTGACTTCAAAGCCTGAAGTTTTAGTATCTGAGCCAGAGATATTAAATTCTGCACCTGAAAGCCCGGAGACACTGATATCAGAACCGGAAATCGCATCTTTTCAAGTAGAAGCCATTCTTTCCGAGCCTGACATGGATGGCTACGATCAAATTCAGGGTGATGAAGAAGTTGATGGAGAAATGCACAATAATCAAAGTCAAAATTACGATACAGTCGATATCAATTCAGAGAGCGAGATTGAGATCGCTCGCCAACAGAATAATTATAATGAAGGTGAGGAAGAACAAATCCTTGGTGATGAAAATATGGATCACGATGATGATAACGTTGATGGTGGTCAGAGCGATAATGATCACGAAGGTATAGACGAAGCGGAAAATCAAGAAAATGTGGAGAATGAAGAAggtcttgaaataaaaaccgaGAATGAACTGAAAGACAGCGAGGAAGGCCAAGACGAAAGAGAACACGAAGAAGAAATTAATCACAATGAAAATGAGGATGAAGATGACGATCTGCCAATACCATTACAGCCAGTTGTTGAAATAAACGAAGAGGTTAATCCATTTAACAGCGTGATGCCTGACGAAGAAGAAGAACCTTTGGAGAACGCTGATCCGAATGAGACTaatgaagaagaagaagctaAGGACCTCGACCCTGATAAAATTTACGTGACAAAAGCCCAACGCgactttatattaaaatatcgtgATGTAATCGAACAAATCAATACGAAACGCTGCTTATGCTGTGACAGAGAACATCCACGCAGAAAGGCTGTTATACAACATTTACAGAAAAATGGTCATAAGGTACCAAAACATACGTGTTACAATTGCGTAGTCACGTTCGGACATATCGGTGCACTTCTCAGCCATATGAGATCAAACTCTTGCACTGATTTATGGAAGATCATATACAACGAAAATGGTATCACCGATGACATGGTTTTGGAAGATGAACCCAAGGAAGTGAAAGTTCAATACAAAGATATTTTCAATGCTAGATCCTACGCCTGTAAGCTCTGTCCAGCTAAATTCCAACTGAAACAATTTATTATGAAACATGTATTAGATACTCATGAAGATGGACAATCTAGGGTTCCGCTTGCTTGTGTTCATTGCCGTGCGAGGTTCAAAGAAAAGAGTTTGCTTAAGAAGCATATACGTAAAGGTGATTGCACTGTTTATGTTGCTTGCGATTTGTGTCCAGAAACTTTCTCTAATATGCAAGTATTCAATGACCATGCATTGGCAGTTCATGCTGGTAATTTCGAGTCAGATAGCCAGAGCAAATGTGTTGATGGTCGACCTACTGATTGTCCCTTATGCGGCAAGAAGAATAGCAGCTATCCGAATTTAGttaaacatttgaaaattataCACAACGAGGAAACGCCTCATCATTGTCAGCATTGCGAAGCTAAATTCGAACAAGCTGCCGATCTTAATAAGCATATTTACATGGAACATTCTGACAGAACCCTAGGCATGCAGACCTACGCACCAGATATATCGATAGTGAAGGAAGAAGCGGAAGAATATCATTATTCTTGTACTGAATGTAATGCCATATTTGAAACTGTCGATGCATGGACTGATCATCAGGTGGCTGAACACAATCAAGTTGCACATCACTGCGATCAATGCGATAAGAAATTCTTACGTCCTTCTGAACTTGCGGAACATAAAAACACCCATTTGAGGGTCAAGTTCTACCCGTGTAGTGTTTGCGCGAACTCTTACAGTACACCACAAAAGTTGTCTGAACATGTCCAGCAATGCCATCCAGGTTTAGGCCCTATCGCTGCTGGTGAATCGGAATTCTTCTGTGATCTGTGTATCAGGGCATTTAAAAGTCGCCAAGCATATTCCAACCATATGCGTATACATTCGAAAATACCTACTACAAATAGAAAGCCCAGTGATACCTTCAACAAAGGCTTTTCGCCCTCGATCATAGGAAAACCGATTAAACAAATAATGCCGATTGTCCATCCTGGTTTTGTATCATTCAAACCGACTACTAATTACAATATTCCTAACGCTCCGTATTCATGCGATATATGTGGAAAAGGATTTATGCATAAGAAGAATATATGGAAGCACAAGAAAGTTTTACATGCTGATTTACTAAATGAGAGGAACGATAGTGAAGAGAATACAATGCAAGCTTCTACTGAGGAAGAGGAATTTAATCCGGATGAAAATGGCTCATTATTGTCCACACCACAATTCAATAGCTTCAATTTCactaattttacaaataatgttCAACAAGCTCCACAAGAGACAATGTCCTATTCATGTGAGCTATGTTTCAAAAAATTCCCGCTTAAGACTAGTTTGTGGAAACACAAGCGAGCTAAACATGGCATTGTTAATTTTAACTCTAACGAAACACAATCTCCTTCCGCGGCCGGTGAAGGTGGTAGTAGCAGATCTAGTTGCACCATCTGTAGAATAACCTTTTCAGATAAGAAATCTTACTATCGTCACCGAAAGAATGTCCATAAGTCCACGGTTCAAATGTGTAAAATATGTGGAAAGCCGCTCAGTTCTACATTGGAATTATATGAACATTTGAAAGCCGCTCACGCCAGAGAATTACTAGGCTACAATGCTAATCAAGGTTCCAATAAGGCTCAGGAAATGGTACAAGAAGTGGAACCCGATTATGAAAATGACCAGGAATCTGTAGACCCAAGCGTTGATTATCAAGCTCGTTACCCATGCGATACTTGTGGCAAACAGTTTGTGGGTTTATTAGCCTTGCAAAATCATCAGTGTATTAACCAAGTACCATCACAACCTCAAACCTTCGATTGCGAAATATGTCATAAAAGTTACACGTCAATATCAGCGCTTAAGAGCCATCGCGGTTGGCATTTGCGTTCACCGGATGGCAAAGCAGCCGCTAATAATAGCGGTCTATGGATGCCACAGCACAAAGTTACGAGTAAAATAAGTAAACACGAAGTACTCGATCCATCTCAACTTGCTAAAGTAACTCATATAAGTCCTGCTACAAGTATACCAGTTAAAAGAAGACTGCCACCAGAGGTTGAGGTTACAGTTGtaaatccaaacaaaaaaatgcGCTCTGACGATTCAGTTGAATTGGAACAGCAAAATTCTGGCTCAAATGAAGACAAATACTGTACGATTTGTGATAAGGAATTTACTAAACGTGCCGCTTATCAGCGTCACATGGACGAGGTGCATCAACCTAATTCTGTATTTTGTCCAGTTTGTGATAAGAGCTTTACAAGAAAATCGACATTGCTTATTCATATGAAGAAACATTATGAAAGTGGTGAAGGTAGTTCAACTACGCTTGTTCAAGGAGAGGAAGAAACGCATACATGTGATCTATGCGGAGCTCAGTATGACGATGAACAGGCGCTTCGATCTCATCGTATGAGACATCACGGGGAAGAATCTGAAGAGGATGATGAGTTTGATGATGGACACGTGCCCTTGCCTCAACCGGGAGAATTTACATGCGGCCAATGTGGTGATGGCGTGGCAACACCCAGGGATTTGATTGCTCATCGGACAATGCACTCTACACCTACAAAATTCTTTTGTAACATATGCAAAGTATACTTTGCGAGAGCTTTAGACCTATCGTCGCACACAAGGGCTAGACATGCAGATAATGACAAAGTATTCTTTCCTTGCGCCATGTGCGACCGATTTTACATGAACAAAAAGAGTTTACAGCGACACATTGAAATGACCCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVQINENDELPTNVCKKCLDNVNNWHIFKNVCERTQNKLQSLIAKDGSQLEEVQIKSEPLSDEIYDDGVVIDGSYPDSENTNMANKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQEDDVIDSLQYKEECDVLQQSDHDSDTEAELQPDIDDEYVDCKNGYICKNNKILSKHPKVSLSMNNIKIKEVIHLRKSKTSLLKPHCPRPKNAWQLLFTDDLLELIVTSTNDNILKNHNTNSIITNVSEIKTLIGILYMHGIMRPTHQKYSDLWNGKCGVPYVISAMKHERFQYLLQNISFDKEDGDSIIQFDIMKRMRKVFEIFAMNCRTAHNVENIVVIDEIIVPVYGPCPFRYNIDKKPLKRGIKMVLLVDSSTFYVSNLDVITDRYFSSEEITNKLVQHLAGTGRTIVMDSWYTSFSLIERLKNDYQLFSIAALNPNSDWIPPLFCSQYRKTRTFMSGFIDEDVSLTSYGVESEKDEEEEEEEEDEMNEPLQPMPKVPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKPYPSFQPKLRPNPFNPKARLMPNPISHKMQFMNKNIPAKIVPMNKVITPQKPIPIKSAKPPQNNLPYPLRIKALKDLQIKKKEPQILKSLLTSKPEVLVSEPEILNSAPESPETLISEPEIASFQVEAILSEPDMDGYDQIQGDEEVDGEMHNNQSQNYDTVDINSESEIEIARQQNNYNEGEEEQILGDENMDHDDDNVDGGQSDNDHEGIDEAENQENVENEEGLEIKTENELKDSEEGQDEREHEEEINHNENEDEDDDLPIPLQPVVEINEEVNPFNSVMPDEEEEPLENADPNETNEEEEAKDLDPDKIYVTKAQRDFILKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDDMVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLACVHCRARFKEKSLLKKHIRKGDCTVYVACDLCPETFSNMQVFNDHALAVHAGNFESDSQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEETPHHCQHCEAKFEQAADLNKHIYMEHSDRTLGMQTYAPDISIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQCHPGLGPIAAGESEFFCDLCIRAFKSRQAYSNHMRIHSKIPTTNRKPSDTFNKGFSPSIIGKPIKQIMPIVHPGFVSFKPTTNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEEEEFNPDENGSLLSTPQFNSFNFTNFTNNVQQAPQETMSYSCELCFKKFPLKTSLWKHKRAKHGIVNFNSNETQSPSAAGEGGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSNKAQEMVQEVEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVLDPSQLAKVTHISPATSIPVKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSGSNEDKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSTTLVQGEEETHTCDLCGAQYDDEQALRSHRMRHHGEESEEDDEFDDGHVPLPQPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00932908;
80% Identity: -