Basic Information

Insect: Noctua pronuba
Gene Symbol: Zfa
Assembly: GCA_905220335.1
Location: LR999901.1:5890940-5899449[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0061 0.57 11.5 1.1 3 23 582 603 581 603 0.96

2 23 0.2 18 6.7 0.3 1 22 989 1010 989 1010 0.95

3 23 7.1 6.6e+02 1.8 0.4 1 22 1052 1073 1052 1075 0.82

4 23 0.016 1.4 10.2 4.8 2 22 1085 1105 1084 1105 0.93

5 23 1.7 1.6e+02 3.7 0.0 3 23 1114 1135 1112 1135 0.89

6 23 0.017 1.5 10.1 0.2 3 23 1156 1177 1154 1177 0.96

7 23 0.0031 0.29 12.4 2.5 1 23 1183 1206 1183 1206 0.95

8 23 0.12 11 7.4 0.0 1 23 1232 1255 1232 1255 0.90

9 23 0.018 1.6 10.0 3.4 1 23 1260 1282 1260 1282 0.97

10 23 0.0082 0.76 11.1 0.2 1 23 1288 1311 1288 1311 0.95

11 23 0.0038 0.35 12.1 0.8 1 23 1324 1346 1324 1346 0.97

12 23 0.00017 0.016 16.4 1.8 1 23 1396 1419 1396 1419 0.97

13 23 0.0017 0.16 13.2 1.4 1 23 1479 1502 1479 1502 0.96

14 23 0.0022 0.21 12.8 2.1 2 23 1529 1551 1528 1551 0.95

15 23 0.037 3.5 9.0 0.1 2 23 1557 1579 1556 1579 0.94

16 23 0.0094 0.87 10.9 0.2 1 21 1623 1643 1623 1644 0.95

17 23 0.0004 0.037 15.2 1.0 1 23 1654 1676 1654 1676 0.93

18 23 0.00011 0.0098 17.0 0.3 2 23 1769 1791 1769 1791 0.93

19 23 3.7e-07 3.5e-05 24.7 1.4 3 23 1798 1818 1797 1818 0.98

20 23 0.021 1.9 9.8 0.3 1 23 1836 1858 1836 1859 0.95

21 23 0.17 16 6.9 0.0 1 23 1882 1904 1882 1904 0.97

22 23 0.026 2.4 9.5 0.6 1 23 1910 1933 1910 1933 0.95

23 23 0.00024 0.022 15.9 0.4 1 23 1941 1964 1941 1964 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0061	0.57	11.5	1.1	3	23	582	603	581	603	0.96
2	23	0.2	18	6.7	0.3	1	22	989	1010	989	1010	0.95
3	23	7.1	6.6e+02	1.8	0.4	1	22	1052	1073	1052	1075	0.82
4	23	0.016	1.4	10.2	4.8	2	22	1085	1105	1084	1105	0.93
5	23	1.7	1.6e+02	3.7	0.0	3	23	1114	1135	1112	1135	0.89
6	23	0.017	1.5	10.1	0.2	3	23	1156	1177	1154	1177	0.96
7	23	0.0031	0.29	12.4	2.5	1	23	1183	1206	1183	1206	0.95
8	23	0.12	11	7.4	0.0	1	23	1232	1255	1232	1255	0.90
9	23	0.018	1.6	10.0	3.4	1	23	1260	1282	1260	1282	0.97
10	23	0.0082	0.76	11.1	0.2	1	23	1288	1311	1288	1311	0.95
11	23	0.0038	0.35	12.1	0.8	1	23	1324	1346	1324	1346	0.97
12	23	0.00017	0.016	16.4	1.8	1	23	1396	1419	1396	1419	0.97
13	23	0.0017	0.16	13.2	1.4	1	23	1479	1502	1479	1502	0.96
14	23	0.0022	0.21	12.8	2.1	2	23	1529	1551	1528	1551	0.95
15	23	0.037	3.5	9.0	0.1	2	23	1557	1579	1556	1579	0.94
16	23	0.0094	0.87	10.9	0.2	1	21	1623	1643	1623	1644	0.95
17	23	0.0004	0.037	15.2	1.0	1	23	1654	1676	1654	1676	0.93
18	23	0.00011	0.0098	17.0	0.3	2	23	1769	1791	1769	1791	0.93
19	23	3.7e-07	3.5e-05	24.7	1.4	3	23	1798	1818	1797	1818	0.98
20	23	0.021	1.9	9.8	0.3	1	23	1836	1858	1836	1859	0.95
21	23	0.17	16	6.9	0.0	1	23	1882	1904	1882	1904	0.97
22	23	0.026	2.4	9.5	0.6	1	23	1910	1933	1910	1933	0.95
23	23	0.00024	0.022	15.9	0.4	1	23	1941	1964	1941	1964	0.96

Sequence Information

Coding Sequence: ATGAATGTAAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCCACCAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATGTTTTTAAAAATGTATGTGAAAGGACACAAAACAAACTACTGTCTCTAAAAGATGGCAACCAACTAGAAGAGGTGAAAATAAAAAGTGAACCACTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTATTCAAACAAAGTGCAGCCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGATCCGCGAATGGATTGGCACCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAGACAAGGGAAGAGTGTGATGTTTTGCAGCATTCTGACCATGACTCAGATACTGAAGCTGAACTCCAAAAAGAAATTGATGACAGTTATGTTAATAGCAAAAGCGGATACATATGCAAAAATAAACAAGTTATGTCCAAAGTTCCAAAACTATCAACTTCTGTAAATAATGCTCGAGTGAAAGAAGCTTTCAAACTCAGGAAACGTAAACCAGAAGTTCGTAAACATTGTTCACGACCTAAAAATGCGTGGCAGTTGTTGTTCACTGATGACCTACTAGAGTTGATTGTTGCTTCCACTAATGACAATATTGTGACAAATGGGAAAAGTTTCACGGAGTCAACGAGCGTCAGCGAAATTAAAACGCTTATTGGTATTCTGTATCTGCACGGCATAATGCGGCCGACGCATCAGAATTGTAGTGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAATATCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATGAGCTTCGATAAAGAGGACGACAACAGCATTATACAGTTTGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACATCTCACGATATCGAGAATGTCGCTGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATTGATAAGAAGCCGCTGAAGCGGGGCTTAAAGATGGTATTGCTAGTTGATTCATCCACATTCTATATGAGCAATTTAGATGTCATCACTGACCCTTACTTCGGCGCCGAGGAAATAACGAAAAAGATGGTTCAGCATTTGGCTGGAACTGGCAGATCTATTGTTATGGACAGTTGGTTTACTTCTTCCTCATTGATGGATATCCTTAAAAATGAGTACCAGTTGTATTCTATTGCAGCCTTGAACCCAAATAGTGATATGATTCCGCCGCTGTTCCTATCTCAGTACAGGAAATGTCGAACATTCATGTCTGGATTTATTGATCATGAAGTATCATTGACATCGTATGTCAATACTGAGGGGAAATCCGGTGCGGAGAGTGAGAACAACGAGGAAGACGAGGAAGAAATGAACGAGCCCGCACAAAATTTCCCAAAAATGCCCCACATGCCCGAGGTGTCCATCACGGTCATGAGGCCTACTGGTGAGACCCTGCACGCTCGCCAAGGAATTCACCAACTCGCTTCTAAATTGTGCCTCGTCTGCGGCCGCTCCTACAGGTACTCTCACAACGCACGCAGACATGAACTTACTGCTCACAGCTTCGACAGGTATACAAACAAAATTACTCCTAAAAAAACCCTCAATCATCTACAACCCAAACTGAGACCGAACCCATTCAATCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCATGAACAAGAATATGCCAACAAAAATAATGCCCATAAACAAAGTTATAACGCCACAGAAACCCATTCCAATAAAGTTGTCGTCGAAGACACAAAATAATTTGCCTTATCCTCTACGCATTAAAGCACTCAAAGATTTACAAATTAAGAAGAAGGAGCCTCAGATTCTAAAGACCTTGTTAACCTCTAAACCTGAAGTTCTGGTCTCAGAACCAGAAATTCTAAATTCTGGACCTGAAAGTCCAGAAACATTGATATCTGAGCCTGAAATAGCATCTTTTCAAGTTGAAACTATCCTTACGGAACCCGATGCCGATGCATACGACGATCCGCAGCAAGGCGATGAAGAAGTCGAGGAAGAAATGCAGATCAATCAAAATCAAAACTATGACACTGTTGATATGGACTCTGAGAACGAAATAGAAATTGCTCGTCAGCAAAGCATTGAACACGATGGCGAGGAAAATGCTAATGGGGATGAGAATATGGACCATGATGACGACAATAACATGGAAGGCGGTCAGAGCGATAACGAGAAAGACGCCAATGACGATACAGCTGATAGTCAAGAGAACATGGAAGAAGAAGATAGTGTTGATATTAAACCTGAAGATCAAATCAAGGACGATGATGGCCAAGAAGAGGAGGGAGAACATGAAGAAGTAGAGATGAATCATAACGAAAACGAGGAAGAAGACGATGATGACCTGCCAATGTCTCTAGCTCCGGTCGTCGAAATAAGTGAGGGATTGCAAGGCGACTCGTTTAACAGCGAAGTCGTTGAGGAAGAGGAGGAACTCGACGAAACTGTCGATCCCAATGACACCATTGAAGAGGAAGAGCAGGTTAAAGAACTTGACCCTGACAAAACATATGTTACGAAAACCCAAAGAGACTTCATCCAAAAATACCGCGATATCATTCAGCAAATCAACACGAAGCGTTGTTTATGTTGTGATCGAGAACATCCGCGCAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGACACAAGGTACCAAAACACACATGCTATAATTGTGTCATCACGTTCGGACATATTGGCGCACTACTCAGCCATATGAGGTCGAATTCTTGCACCAATCTCTGGAAGATTATTTACAATGAAAATGGCATTACTGACGATTTGGTTCTCGAAGATGAGCCGAAAGAAGTCAAGGTTGCTTACAAAGATATCTTCAATGCCAGGTCCTACGCTTGCAAACTCTGCCCAGCTAAATTCCAACTGAAACAGTTTATAATGAAGCATGTTTTGGATACCCATGAGGATGGACAGTCAAGGGTACCACTCTGTTGTGTCCACTGCCGTTCTAGATTCAAAGATAAGAGTTTACTAAAGAAACATATTCGTAAAGGAGATTGTACAGTTTATATTGCTTGCGATTTGTGTACAGAAAGGTTCGGGAATATGCAGGACTTCAACGACCATGCGCTAGCCATCCACGCCGGCAGTTTCGATCAATCTGATAATCCGAGCAAATGTGTTGACGGTCGACCAACAGACTGTCCTTTGTGTGGAAAGAAAAACAGTAGCTATCCGAATTTGGTGAAACATTTGAAGATTATACACGCTGAGGAAAAACCTCACTACTGCCAGCATTGCGACGCGAAATACGAACAAGCTACTGATCTGAACAAACACATTTACATGGAGCATTCTGACAGAACACTAGGAATGCCGCCTGCTGAACCAGATATGTCCATAGTGAAGGAGGAAGCAGAGGAGTACCACTACTCCTGTACGGAATGTAATGCTATATTCGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCTGAACATAACCAGGTGGCCCACCACTGTGACCAGTGTGAGAAGAAGTTCCTTCGTCCTTCAGAGCTGGCAGAGCACAAGAACACCCACTTGCGGGTTAAGTTTTATCCTTGCAGTGTGTGTCCCAACTCTTACAGCACTCCACAGAAACTTTCTGAGCACGTGCAACAGTCGCATCCAGGAATTGGCGCGGTCGCGGCAGCCGAGTCGGAATTCTTCTGCGACATCTGTATCAGAGCATTCAAGAGTCGCCAAGCTTACTCAAATCATATGCGTATTCACGCTAAGGTCCCTACGACTAACAGGAAACCGACTCCAATCAAAGAGGGATTCGCGCCTCAAATTATCGGGAAACCCATCAAGCAGTATCCTATGGTTCAACCGGGCTTTGTATCATTTAAATCTAATTACAACATCCCTAACGCCCCATATTCTTGTGACATTTGCGGTAAAGGATTCATGCATAAGAAAAATATATGGAAACACAAGAAAGTGTTGCATGCTGACATTTTAGTCGATAGACATGACAGTGAAGAGAACACTATGCAAGCTTCCACGGAAGAAGAGGAATTCAATCCTGATGAGAATGGCGGTGTTCTCTCCACGCCACAATTTAATAGCTTTAACTTTACGAACTTCCCGAACAATGCTCAACAACCAACACCAGAAACAATGCCATACTCGTGTGACTTATGTAGCAAACGGTTCCCGCTTAGGACCAGCTTGTGGAAGCACAAGCGCGCTAAACACGGAATTGTAAACCCTAGCACTAGTGGTAACAACGAAACATCCACGCCGTCCGCTAGCGGGGAAAGCAGTAGTCGATCTAGCTGCACTATATGCAGAATCACATTTTCAGACAAGAAATCTTACTATCGCCATCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAAATATGTGGCAAACCGCTAAGTTCAACTTTGGAATTATACGAGCACTTGAAAGCCGCTCATGCAAGGGAATTACTGGGTTATAACGCCAACCAAGGCTCTAGTAAATCACAAGAAATGTCACAAGAGATGGAACCCGATTATGAAAATGATCAGGAGTCTGTCGACCCGAGCGTTGATTACCAAGCGCGGTACCCGTGCGATACTTGTGGCAAACAATTTGTTGGTTTGCTAGCTTTGCAAAACCACCAGTGCATCAATCAGATAGCATCACAGCCACAGACGTTTGACTGCGAGATTTGTCACAAGAGTTACACTTCAATATCTGCGCTAAAAAGCCATCGTGGGTGGCATTTACGTTCGCCCGATGGAAAGGCAGCCGCCAACAATTCTGGCCTGTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGCAAACATGAGGTCGTTGACGCGTCTCAACTTGCTAAGGTCACACACACCCCCACACCCCCACCTGTCTCTGCAACCGCAGCGAAAAGAAGACTACCACCAGAGGTCGAAGTGACAGTCGTAAATCCGAATAAGAAACTGCGCTCAGACGACTCGGTCGACTTGGATATGCAAAGTTCCGGTGCCATCGAGGATAGGTACTGTACAATTTGCGATAAGGAATTTACAAAACGAGCGGCGTACCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTGTTTTGCCCGGTCTGTGATAAGAGTTTTACAAGGAAGTCCACATTGCTCATTCACATGAAGAAACATTACGAGAGCGGTGAGGGCAGCTCCTCTGCTACAGGTCAAGGAGATGATGATTACTCCTGTGACTTGTGTGGAGCCCAGTATGACAATGATCAGGCATTGAGGGCGCACCGAGCGCGGCACCACGGAGAAGATGAAGAGTCAGCTGAAGAGAGTGACGACGGAAATGTTCCTATTGCTCCTCCCGGTGAATTCACATGTGCGCAATGTGGCGATGGCGTCGCTACTCCCAGGGACCTCATCGCCCATCGCACAATGCACGCTACTCCCACCAAATTCTTCTGTAACATATGCAAAGTGTACTTCGCTCGGGCGCTCGACCTCTCCTCGCACACTCGGGCGCGACACGCTGACAACGAAAACGTATTCTTTCCGTGTGCCATGTGCGACAGGTTTTATATGAACAAGAAGAGCTTACAGCGGCATATTGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLLSLKDGNQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAGYSNKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTREECDVLQHSDHDSDTEAELQKEIDDSYVNSKSGYICKNKQVMSKVPKLSTSVNNARVKEAFKLRKRKPEVRKHCSRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSFTESTSVSEIKTLIGILYLHGIMRPTHQNCSDLWNSECGVPCVRNIMKYERFKFLLQNMSFDKEDDNSIIQFDIMKRMRKVFEIFAMNCRTSHDIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGLKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKMVQHLAGTGRSIVMDSWFTSSSLMDILKNEYQLYSIAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSGAESENNEEDEEEMNEPAQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMPINKVITPQKPIPIKLSSKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILTEPDADAYDDPQQGDEEVEEEMQINQNQNYDTVDMDSENEIEIARQQSIEHDGEENANGDENMDHDDDNNMEGGQSDNEKDANDDTADSQENMEEEDSVDIKPEDQIKDDDGQEEEGEHEEVEMNHNENEEEDDDDLPMSLAPVVEISEGLQGDSFNSEVVEEEEELDETVDPNDTIEEEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCTERFGNMQDFNDHALAIHAGSFDQSDNPSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATDLNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPTPIKEGFAPQIIGKPIKQYPMVQPGFVSFKSNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGGVLSTPQFNSFNFTNFPNNAQQPTPETMPYSCDLCSKRFPLRTSLWKHKRAKHGIVNPSTSGNNETSTPSASGESSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQEMSQEMEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIASQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDASQLAKVTHTPTPPPVSATAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQSSGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNENVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -