Pful006225.2
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- -
- Assembly
- GCA_963082885.1
- Location
- OY720174.1:15685374-15694006[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0059 0.64 11.6 1.1 3 23 655 676 654 676 0.96 2 22 0.029 3.1 9.4 0.6 1 22 1062 1083 1062 1083 0.95 3 22 7 7.6e+02 1.9 0.2 1 22 1125 1146 1125 1148 0.82 4 22 0.0023 0.24 12.9 2.1 3 22 1159 1178 1159 1178 0.96 5 22 0.011 1.1 10.8 0.2 3 23 1228 1249 1226 1249 0.96 6 22 0.002 0.22 13.1 2.5 1 23 1255 1278 1255 1278 0.95 7 22 0.13 14 7.3 0.0 1 23 1304 1327 1304 1327 0.90 8 22 0.0059 0.63 11.6 3.5 1 23 1332 1354 1332 1354 0.97 9 22 0.083 9 8.0 0.1 1 23 1360 1383 1360 1383 0.95 10 22 0.0025 0.27 12.8 1.3 1 23 1396 1418 1396 1418 0.97 11 22 0.00019 0.02 16.3 1.8 1 23 1472 1495 1472 1495 0.97 12 22 0.0051 0.55 11.8 1.7 1 23 1554 1577 1554 1577 0.96 13 22 0.0012 0.13 13.8 2.1 2 23 1604 1626 1603 1626 0.95 14 22 0.024 2.6 9.7 0.1 2 23 1632 1654 1631 1654 0.94 15 22 0.011 1.1 10.8 0.2 1 21 1698 1718 1698 1719 0.95 16 22 0.00045 0.048 15.1 1.0 1 23 1729 1751 1729 1751 0.93 17 22 0.00012 0.013 16.9 0.3 2 23 1842 1864 1842 1864 0.93 18 22 4.2e-07 4.5e-05 24.7 1.4 3 23 1871 1891 1870 1891 0.98 19 22 0.026 2.8 9.6 0.9 1 23 1910 1932 1910 1933 0.94 20 22 0.13 14 7.4 0.0 1 23 1956 1978 1956 1978 0.97 21 22 0.029 3.2 9.4 0.6 1 23 1984 2007 1984 2007 0.95 22 22 0.00027 0.029 15.8 0.4 1 23 2015 2038 2015 2038 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTTCCGTCTTCGCTTCGAAAATCAAGGATTGTGTGTCTGTACAGGTAAATGAAAATGACGACCTGCCTACGAATGTGTGCAGGAAATGCATGGATAATGTCAATAATtggcatacatttaaaaatgtatgtgaaaGGACACAAAACAAACTACAGTCTCTGATTAGTAAAGATGGCAGCCAACTAGAAGAGGTCAAAATAAAGAGTGAACCATTGTCTGATGAAGCCTATGATGATGGAGTGGTTATTGATGGTTCATACCCTGACAGTGAGAATGCCAGCCCCGCAAACAAAGTTCAACCTGAAGGCCCTCCAATCTTGGCTTCACTGGGGCTCACGCCGAGAAGTGATAAGAAATATGTGGATCCTCGAATGGATTGGCACCGGGTCCATTCAATCTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAATCAAGGGAAGAGTGTGATGTTTTGCAGCACTCAGATCATGATTCTGACACAGAGGCTGAGCTCCAACCAGACATTGAGGATGAATACGTAGATTGCAAAAATGGCTATTTAtgcaaaactaaaaaaattatactgaaaaatCCGAAAATATCACCttctatgaataatattaaagtcAAAGAAGCTCTTCAACTTAGAAAACGCAATTTGGACATACCTAAACAACATTGCCCACAACCTAAAAATGCTTGGCAGTTATTATTTACTGATGACCTACTAGAATTAATTGTCACTTCAACCAATGAAAATGTTATGCGAGGTGGAAAAGGTAACTCAGTACCAACTAACGTCAGCGAAATAAAAACTCTTATCGGCATTTTGTATTTACACGGTATAATGCGGCCGACGCATCAGAAATGTACTGACCTTTGGAGTAATGAATGTGGTGTGCCTTGTATTAGAAATGCTATGAAATACGAAAGGTTTAAATTCCTTCTTCAAAACATAAGTTTCGATAATGAAGACGACGACATCATTATACAATATGACATTATGAATCGCATGCGCAAGGTATTTGAAATCTTCGCCATGAATTGCAGAGCGACTCATGAGATAGAGAACATTGCTGTTATTGATGAAATCATTGTACCAGTTTACGGGCCTTGCCCATTTCGATATAATATTGATAAGAAACCACTAAAGCGTGGAATAAAAATGGTATTGCTTGTTGACTCATCTACATTCTATATAAGCAATTTAGATGTCATCACTGACCCCTACTTTGGTGCAGAAGAGATAGCTAAAAAGTTAGTTCAGCATTTAGCTGGAACGGGTAGAATTATTCTTATGGATAGTTGGTTTACATCTACTTCATTAATGAAACGTCTTAAAAATGAATATCAGCTGTTTACCTTAGTCGCTTTGCATCCAAACAATGATTGGATTCCACCTTTGTTTCTTTCACAGTACAGAAAAAGTAGTAGCTTCATGTCTGGATTTATTGATCATGAAGTTTCACTCACATCTTACGTCAGTTCTGAATCAAAAGCAATAAATGTATTAACAAATGACCCCAGGTTTTACAGAAAAGGGCATGTGAACCAAACTACAGCCGTGGCTGTATACAAGAAGAACCAATCAGCTGTAGAAGTTATAGATGTTCTTATGAACTATTACACAACCATGCAACATACAAATGACTGGACATTGTCATTATTCTTTACACTATTAAACATAGCCTCTGTAAATGCTCAGGGAGTGGAGAGTGACAAAGAGGAGGAAGAGGAAGATGATGATGAGATAAATGAACCTCTTCAATCATATCCCAAAATGCCTCACATGCCCGAGGTATCCATAACTGTAATGCGGCCCACCGGTGAAACACTTCACGCCCGACAAGGTATTCACCAACTCGCATCTAAAGATTGTCTCGTCTGCGGTCGCACCTATAGATACTCTCACAACGCTCGTCGACATGAACTAACTGCTCATAGCTTTGACAGATACACGAATAAGATAACACCCAAAAAGTCCTTCACTCACTTCCAACCCAAACTGAGACCTAATCCATTCAATCCTAAAGCACGGTTGATGCCGAATCCTATTAGCCATAAGATGCAATTTTTATCCAAAAACATCCCAACAAAAATTGTTCCCATTAACAAAGTTATTACACCACAGAAGCCTATACCTATAAAATCGGCAAAACCATCACAGAATAATTTGCCTTATCCCCTTCGTATCAAAGCACTTAAagatttacaaataaagaagAAGGAACCTCAAATTTTGAAGACATTGTTAACCTCTAAACCTGAAGTTTTAGTCTCCGAACCGGAGATATTAAATTCTGGACCCGAAAGTCCAGAAACGCTAATATCGGAGCCAGAGATAGCCTCATTCCAAGTAGAAGCAATACTTTCGGAACCTGATGCTGACGGTTATGATCAAAATCAAGGTGACGAGGAAATCGATGGAGAAATGCATAATAATCAAAGTCAGAATTATGATACTGTTGATATGAATTCTGAAAATGAAATTGAGATAGCTCGACAACAGGGTAATAATGAACTTGAAGGTGACGAACATTGTGATGGTGATGAAAATATAGATCAAGATGACGATAATATGGATGGTGCCCAAAGCGATAATGGCCAGGATGGTGTTGATGATACAGCAGATAGTCAAGAGAATATGGAAATGGAAGATGGTCTCGAAATTAAAGCTGAACGTGAGATGGAGGATGGCAAGGAAGCTTCTGAGGAAAGAGAACATGAAGATCAAGAAGAAACGGAAATAAATCAGGACGAACGCGAGGAAGAGGACGATGACGACCTTCCTATAATACAGCCTGTCGTTGAAATTAATGAAGACTTACAAGTAAACTCGTTTAATAGTGAGGTAGCCGAGGAGGAAGAAGAACTTGACGAGACCGCTGATCCTAATGAGACTGTCGACGAAGAGGAGGTCAAAGAACTTGACCCTAACAAAATCTATGTTACAAAAACGCAACGGGACTTCATTAAAAAGTATCGCGACGTAATTGAACAAATTAATACGAAACGATGTCTATGTTGCGACAGAGAACACCCGAGAAGAAAAGCTGTCATACAGCACTTGCAGAAAAATGGACACAAGGTCCCCAAACACACGTGCTATAATTGCGTCATTACATTCAGTCATATTGGCGCGCTTCTCAGCCACATGAGGTCGAATTCATGCACTAATTTGTGGAAGATTATATATAACGAAGATGGCATTACTGATGATTTGGTTCTGGAGGATGAGCCCAAGGAAGTGAAAGTTCAATACAAAGATATTTTCAATGCTAGATCATACGCCTGTAAGCTCTGTCCAGCTAAATTCCAATTGAAACAGTTCATTATGAAACACGTATTGGATGCACACGAAGATGGCCAGTCTAGGGTACCGCTCGGCTGTGTTCATTGTCGAGCGAGGTTTAAAGATAAAAGTTTGCTTAAGAAACATATTCGTAAAGGCGATTGTACAGTATACGTAGCCTGCGATTTATGCCCAGAACAATTTTTGAATATGCAGCACTTTAATGATCACGCATTAGCTGTTCATGCTGGTAATTTCGAGACAGATAGTCAAAGCAAATGTGTTGACGGTCGCCCTACAGACTGTCCTTTGTGCGGTAAGAAAAATAGCAACTATCCAAATTTAGTAAAACATTTGAAAATGATACATAGTGAGGAAAAACCACACTATTGCCAGCATTGCGATTCTAAATTTGAACAAGCTGCTGATCTCAACAAACACATTTACATGGAGCATTCTGATCGAACACTAGGCATGCAAAATAATGAACCAGATATGTCCATTGTGAAGGAAGAGGCGGAAGAATATCATTATTCTTGCACTGAATGTAACGCCATATTTGAAACTGTCGACGCGTGGACAGACCACCAGGTGGCAGAACACAATCAAGTGGCCCACCACTGTGACCAGTGCGATAAGAAATTCTTGCGTCCTTCCGAACTGGCGGAACATAAGAACACTCATCTAAGAGTTAAGTTCTACCCTTGTAGCGTATGTGCGAACTCTTACAGTACTCCACAGAAATTGTCTGAGCATGTACAACAAGTTCACCCAGGTATCGGCGCACTCGCTGCAGCCGATGCTGAATTTTTCTGTGACATCTGTATCAGGTCGTTCAAAAGTCGCCAAGCATATTCAAATCATATGCGTATACACGCTAAAGTGCCTACTACAAATAGAAAACCAGGTGATATTTCAAGTAAAAGAAATGAATTTTCACCGTCAATTATTGGCAAACCCATTAAACAGGTATACCCGATGGTTCAACCTGGTTTTGTGTCATTTAAACCACATTATAATATCCCTAATGCGCCATATTCTTGTGACATTTGTGGCAAAGGATTTATGCATAAAAAGAATATATGGAAACACAAAAAAGTTTTGCATGCAGATATACTAAATGACAGAAACGACAGTGAAGAAAACACTATGCAAGCTTCTACCGAAGAAGACGAGTATAATCCTGATGAAAACGGCGCTGTGCTTTCTACACCGCAGTTTAATAGCTTCAACTTTACCAATTTCCCAAATAACATTCAACAGCCACAGCAAGATATGCCTTATTCATGTGAATTATGTTTCAAAAGATTCCCGCTTAGAACTAGTTTGTGGAAACATAAACGTGCGAAACACGGAATCGTTAACCCGAACTCCAGCGGCAATGCGGAGGCTCAGATGGCAACTGGAAGTGGCGAAGTTAGTAGTAGATCTAGTTGTACAATATGCAAAATTACGTTTTCAGACAAAAAATCTTATTACCGTCATCGAAAGAATGTTCATAAATCCACAGTTcaaatgtgtaaaatatgtGGTAAACCTCTTAATTCGACAGTGGAATTGTATGAGCACTTAAAGGCCGCTCATGCAAGAGAACTTTTAGGCTACAATGCTAATCAGGGATCCAGTAAAACCCAAGAAGTAACGCCAGAGATTGAACCTGATTATGAGAATGACCAGGAATCGATAGATCCAAGCGTGGATTATCAGGCGCGTTACCCATGTGATACATGTGGAAAACAATTCGTTGGTTTGTTAGCTTTGCAAAATCATCAGTGTATAAACCAGACCTCTTCACAACCACAAACATTCGATTGTGAAATCTGTCACAAGAGTTACACGTCAATATCAGCGCTGAAAAGTCATCGTGGGTGGCATTTGCGCTCACCGGATGGCAAAGCGGCCGCTAATAATAGCGGTCTTTGGATGCCCCAACACAAAGTTACGagcaaaataagtaaacatGAAGTTATAGATCCAACACAACTCGCTAGGGTAGTAACACAGTCGGGGCCCGCTGCCACGGTAGCAGCGAAAAGAAGACTGCCTCCGGAAGTCGAGGTCACAGTTGTCAATCCGAATAAGAAAATGCGCTCAGACGATTCTGTTGATTTAGATCAACAAAATTCGAGCACGGCCGAAGATAGATACTGCACGATTTGTGATAAGGAATTTACTAAACGAGCAGCGTATCAGCGCCATATGGACGAAGTTCATCAACCTAACTCTGTGTTCTGTCCGGTTTGTGATAAGAGTTTCACAAGAAAGTCAACATTGCTTATCCACATGAAAAAACATTATGAGAGCGGTGAAGGCAGTTCAAACGCAACTGCACAAGGTGATGAGGACATGCACGTGTGTGATTTATGTGGCGCTCAGTATGATGATGAACAATCGTTAAGAGCGCATCGAGTGAGGCATCACGGCGAAGAGTCTGATGAAGATGATGACGATAACGACGGCAATGTACCTATCCCTCCTCCGGGAGAATTCACGTGCGGCCAGTGTGGGGACGGCGTCGCTACGCCCAGGGACCTGATCGCTCATCGCACAATGCATGCTACGACCACCAAATTTTTCTGTAACATTTGCAAAGTGTACTTTGCGAGGGCGTTAGACCTTTCCTCTCACACCAGGGCTAGACACGCCGACAACGAAAAGGTATTTTTTCCTTGCGCCATGTGCGACagattttatatgaataagAAAAGTTTACAGCGGCACATTGAGATGGCTCATTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPSVFASKIKDCVSVQVNENDDLPTNVCRKCMDNVNNWHTFKNVCERTQNKLQSLISKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPDSENASPANKVQPEGPPILASLGLTPRSDKKYVDPRMDWHRVHSILDMVQDNEVIDSLQSREECDVLQHSDHDSDTEAELQPDIEDEYVDCKNGYLCKTKKIILKNPKISPSMNNIKVKEALQLRKRNLDIPKQHCPQPKNAWQLLFTDDLLELIVTSTNENVMRGGKGNSVPTNVSEIKTLIGILYLHGIMRPTHQKCTDLWSNECGVPCIRNAMKYERFKFLLQNISFDNEDDDIIIQYDIMNRMRKVFEIFAMNCRATHEIENIAVIDEIIVPVYGPCPFRYNIDKKPLKRGIKMVLLVDSSTFYISNLDVITDPYFGAEEIAKKLVQHLAGTGRIILMDSWFTSTSLMKRLKNEYQLFTLVALHPNNDWIPPLFLSQYRKSSSFMSGFIDHEVSLTSYVSSESKAINVLTNDPRFYRKGHVNQTTAVAVYKKNQSAVEVIDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQGVESDKEEEEEDDDEINEPLQSYPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKSFTHFQPKLRPNPFNPKARLMPNPISHKMQFLSKNIPTKIVPINKVITPQKPIPIKSAKPSQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDADGYDQNQGDEEIDGEMHNNQSQNYDTVDMNSENEIEIARQQGNNELEGDEHCDGDENIDQDDDNMDGAQSDNGQDGVDDTADSQENMEMEDGLEIKAEREMEDGKEASEEREHEDQEETEINQDEREEEDDDDLPIIQPVVEINEDLQVNSFNSEVAEEEEELDETADPNETVDEEEVKELDPNKIYVTKTQRDFIKKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRSNSCTNLWKIIYNEDGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLGCVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPEQFLNMQHFNDHALAVHAGNFETDSQSKCVDGRPTDCPLCGKKNSNYPNLVKHLKMIHSEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQNNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQVHPGIGALAAADAEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDISSKRNEFSPSIIGKPIKQVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEEDEYNPDENGAVLSTPQFNSFNFTNFPNNIQQPQQDMPYSCELCFKRFPLRTSLWKHKRAKHGIVNPNSSGNAEAQMATGSGEVSSRSSCTICKITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTVELYEHLKAAHARELLGYNANQGSSKTQEVTPEIEPDYENDQESIDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQTSSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPTQLARVVTQSGPAATVAAKRRLPPEVEVTVVNPNKKMRSDDSVDLDQQNSSTAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSNATAQGDEDMHVCDLCGAQYDDEQSLRAHRVRHHGEESDEDDDDNDGNVPIPPPGEFTCGQCGDGVATPRDLIAHRTMHATTTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00017541;
- 90% Identity
- -
- 80% Identity
- -