Basic Information

Insect: Apamea sordens
Gene Symbol: Zfa
Assembly: GCA_945859755.1
Location: CAMAOQ010000041.1:13500129-13508757[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.012 0.98 10.8 1.6 3 23 743 764 742 764 0.96

2 23 0.26 21 6.6 0.3 1 22 1148 1169 1148 1169 0.95

3 23 9.2 7.7e+02 1.7 0.4 1 22 1211 1232 1211 1234 0.82

4 23 0.02 1.7 10.1 4.8 2 22 1244 1264 1243 1264 0.93

5 23 2.7 2.2e+02 3.4 0.0 3 23 1273 1294 1271 1294 0.89

6 23 0.022 1.8 10.0 0.2 3 23 1315 1336 1313 1336 0.96

7 23 0.0023 0.19 13.1 1.7 1 23 1342 1365 1342 1365 0.95

8 23 0.15 13 7.3 0.0 1 23 1391 1414 1391 1414 0.90

9 23 0.023 1.9 9.9 3.4 1 23 1419 1441 1419 1441 0.97

10 23 0.011 0.89 10.9 0.2 1 23 1447 1470 1447 1470 0.95

11 23 0.005 0.41 12.0 0.8 1 23 1483 1505 1483 1505 0.97

12 23 0.00022 0.018 16.2 1.8 1 23 1555 1578 1555 1578 0.97

13 23 0.0033 0.27 12.6 0.9 1 23 1640 1663 1640 1663 0.95

14 23 0.0029 0.24 12.7 2.1 2 23 1690 1712 1689 1712 0.95

15 23 0.049 4.1 8.9 0.1 2 23 1718 1740 1717 1740 0.94

16 23 0.012 1 10.8 0.2 1 21 1784 1804 1784 1805 0.95

17 23 0.00052 0.043 15.1 1.0 1 23 1815 1837 1815 1837 0.93

18 23 0.00014 0.012 16.9 0.3 2 23 1930 1952 1930 1952 0.93

19 23 4.9e-07 4.1e-05 24.6 1.4 3 23 1959 1979 1958 1979 0.98

20 23 0.027 2.3 9.7 0.3 1 23 1997 2019 1997 2020 0.95

21 23 0.15 12 7.3 0.0 1 23 2043 2065 2043 2065 0.97

22 23 0.034 2.8 9.4 0.6 1 23 2071 2094 2071 2094 0.95

23 23 0.00031 0.026 15.8 0.4 1 23 2102 2125 2102 2125 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.012	0.98	10.8	1.6	3	23	743	764	742	764	0.96
2	23	0.26	21	6.6	0.3	1	22	1148	1169	1148	1169	0.95
3	23	9.2	7.7e+02	1.7	0.4	1	22	1211	1232	1211	1234	0.82
4	23	0.02	1.7	10.1	4.8	2	22	1244	1264	1243	1264	0.93
5	23	2.7	2.2e+02	3.4	0.0	3	23	1273	1294	1271	1294	0.89
6	23	0.022	1.8	10.0	0.2	3	23	1315	1336	1313	1336	0.96
7	23	0.0023	0.19	13.1	1.7	1	23	1342	1365	1342	1365	0.95
8	23	0.15	13	7.3	0.0	1	23	1391	1414	1391	1414	0.90
9	23	0.023	1.9	9.9	3.4	1	23	1419	1441	1419	1441	0.97
10	23	0.011	0.89	10.9	0.2	1	23	1447	1470	1447	1470	0.95
11	23	0.005	0.41	12.0	0.8	1	23	1483	1505	1483	1505	0.97
12	23	0.00022	0.018	16.2	1.8	1	23	1555	1578	1555	1578	0.97
13	23	0.0033	0.27	12.6	0.9	1	23	1640	1663	1640	1663	0.95
14	23	0.0029	0.24	12.7	2.1	2	23	1690	1712	1689	1712	0.95
15	23	0.049	4.1	8.9	0.1	2	23	1718	1740	1717	1740	0.94
16	23	0.012	1	10.8	0.2	1	21	1784	1804	1784	1805	0.95
17	23	0.00052	0.043	15.1	1.0	1	23	1815	1837	1815	1837	0.93
18	23	0.00014	0.012	16.9	0.3	2	23	1930	1952	1930	1952	0.93
19	23	4.9e-07	4.1e-05	24.6	1.4	3	23	1959	1979	1958	1979	0.98
20	23	0.027	2.3	9.7	0.3	1	23	1997	2019	1997	2020	0.95
21	23	0.15	12	7.3	0.0	1	23	2043	2065	2043	2065	0.97
22	23	0.034	2.8	9.4	0.6	1	23	2071	2094	2071	2094	0.95
23	23	0.00031	0.026	15.8	0.4	1	23	2102	2125	2102	2125	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCccgtcctcgctttgaaaatcAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCCACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGcatgtttttaaaaatgtttgtgaaAGGACACAAAACAAACTACAGTCTCTAAAAGATGGCAGCCAACTAGAAGAGgtgaaaataaaaagtgaacCACTATCTGATGGGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTTCTCGAACAAACTACAACCTGAAGGTCCCCCAATCTTGGCTTCGTTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGACCCACGAATGGATTGGCATCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAGACAAAGGAAGAGTGTGATGTTTTGCAACATTCTGATCATGACTCGGATACAGAAGCCGAACTCCAACCAGAAATTGATGATGATTATGTTGATTGCAAAAATGGATAcatatgcaaaaataaaaaagttatatcaaAAGTTCCAAAACTATCAACTTCTGTAAATAATGCCAGAGTCAAAGAAGCTTTCAAACTTAGGAAACGCAAATCAGAAGTTCCTAAACATTGTTCACGACCTAAAAATGCGTGGCAGTTGTTATTCACCGATGACCTACTAGAATTGATTGTTACTTCTACTAATGACAATATTGTGACAAATGGGAAAAGTTTCACGGAGTCAACCAGTGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATCTGCACGGCATAATGCGGCCGACGCATCAGAAATGCAGTGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAAAATCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATGAGCTTCGATAAAGAGGACGACGATAGCATTATACAGTTCGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACATCTCACGAGATCGAGAATGTCGCAGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATTGATAAGAAGCCGCTGAAGCGGGGCATAAAGATGGTATTGCTAGTTGATTCATCCACTTTCTATATGAGCAATTTAGACGTCATTACTGATCCTTATTTTGGCGCCGAAGAGATAACGAAAAAGTTGGTTCAGCATTTAGCTGGAACTGGCAGATCTATTGTTATGGATAGTTGGTTCACATCTCCCTCATTGATGGATAGCCTTAAAAATGAGTACCAGTTGTATTCTATTGCGGCCTTGAACCCAAACAGTGATATGATTCCGCCACTATTCCTATCTCAATACAGGAAATGTCGAACATTTATGTCTGGATTTATTGATCATGAAGTATCACTGACATCTTATGTTAATACTGAAGGGAAATCAGTTAATGTATTGACTAATGAGCCTAGATATTACAGGAAAGGTCATATAAATCACACTACAGTTGTATCGGTGTATAAGAAGAATCAGTCTGCCGTAGAAGTAGTGGATGTTCTCATGAATTACTACACTACAATGCAACACACAAATGATTGGACACTCTCCTTATTCTTTACATTGTTGAACATTGCCTCCGTTAATGCTCAAGTTTTGTGGTGCTCTCAAAACTCGAATGTATTGCAGCGTCGGTTATTTATTAAAGATTTAGCTTTAAGTTTACTAGAACCAGATGAGGAAAGAATGTTAATTTCTCCAATAAGCGATTTAGAGGAgagaaaaaacaaattttctcTTGTACGCAGTAATGTACAACCATATTATAAGAATAGGAGAAGGTGCAAGATATGTGTGAAGACAACGAAACGTGATAGGAGAACAAGGCAGTTCTGTGTAAAGTGCGGCACATTTATTTGTAGAGAGCATGCTGGTGCGGAGAGTGAGAACAATGAAGAAGACGAGGAAGAAATGAACGAGCCCGCACAAAATTTCCCGAAAATGCCCCACATGCCCGAGGTGTCCATCACGGTGATGAGGCCTACTGGTGAAACCCTGCATGCTCGCCAAGGTATTCACCAACTCGCCTCCAAACTGTGCCTCGTCTGCGGCCGCTCCTACAGGTACTCCCACAACGCACGCAGACATGAACTTACATCTCACAGCTTCGACAGatatacaaacaaaattacTCCTAAAAAAACCCTCAATCATCTACAACCCAAACTCAGACCGAACCCATTCAATCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCTTTAACAAGAACATGCCTACAAAAATAATGCCCATAAACAAAGTTATAACGCCACAGAAACCCATTCCAATAAAGACGTCaaagacacaaaataatttgCCTTATCCTCTACGCATTAAAGCACTCAAAGATTTACAAATTAAGAAAAAGGAGCCTCAGATTCTGAAGACTTTGTTAACCTCCAAACCTGAAGTTCTCGTTTCCGAACCAGAAATTTTAAATTCTGGGCCTGAAAGTCCAGAAACATTGATATCTGAGCCTGAAATTGCGTCTTTTCAAGTCGAAGCTATTCTTACGGAACCCGATGCCGATGCATACGATGATCCACAACAAGGTGACGAAGAAGTTGATGAAGAAATGCAGAACAATCAAAGTCAAAACTACGACACAGTCGATATGGACTCTGAGAATGAAATAGAAATTGCTCGTCAGCACGGCATTGAGCACGAAGGTGAGGAAATAGTTGACGGGGAAGAGAATATCGaccatgatgatgataataacatGGAAGGCGCTCAGAGCGACAACGAGAAAGACGGCAATGACGATACAGCTGAAAGTCAAGAGAACATGGAAGAAGAAGATAGTGTTGATATTAAACCTGAAGACCAAATGAAGGAAGACGAAGGCCAAGAGGAGGTAGAACACGAAGAATTAGAAATAAATCACAACGAAAATGAGGAAGAAGACGATGATGACCTTCCAATGTCATTAGCGCCCGTCGTCGAAATAAGTGAGGGGTTGCAAGCCGACTCGTTTAACAGCGAAGTCAATGAAGATGACGAGGAACTCGATGAAACTGTCGATACCAATGAAACCATTGAAGATGAGGAGCAAGTCAAAGAACTTGACCCTGACAAAACATATGTTACGAAAACCCAAAGAGACTTCATCCAGAAATATCGCGACATAATTCAGCAAATTAACACGAAACGTTGTTTATGTTGCGATCGAGAACATCCGCGCAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGGCATAAAGTACCAAAACACACTTGTTACAACTGTGTCATCACATTCGGACATATTGGCGCTCTACTTAGTCATATGAGGTCGAATTCTTGCACTAATTTGtggaaaattatttataatgaaaaTGGCATTACTGACGACTTGGTTCTCGAAGATGAGCCGAAAGAGGTCAAGGTTGCATACAAAGATATTTTCAATGCCAGGTCATACGCTTGCAAGCTCTGTCCTGCTAAGTTCCAACTGAAACAGTTTATTATGAAGCATGTTTTGGATACTCATGAGGATGGTCAGTCAAGGGTGCCGCTCTGTTGTGTCCACTGCCGATCTAGGTTCAAAGATAAGAGCTTACTAAAGAAACACATTCGTAAAGGTGATTGTACAGTTTATATAGCTTGCGATTTATGCTCAGAAAAGTTCGGGAACATGCAGGACTTCAACGACCATGCGTTAGCTATCCATGCTGGCAGTTTCGATCAGTCGGATAATCAGAACAAATGTGTTGACGGTCGACCAACAGACTGTCCCTTGTGCGGAAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATACATGCGGAAGAGAAACCTCATTACTGCCAGCATTGCGATGCTAAATACGAACAAGCTGCTGATCTGAACAAACACATTTACATGGAGCATTCTGACAGAACATTGGGCATGGCGCCCGCTGAACCAGATATGTCCATAGTTAAGGAAGAAGCAGAGGAGTACCATTACTCCTGTACGGAATGTAATGCCATATTCGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCCGAACATAACCAAGTGGCCCACCACTGTGACCAATGTGAAAAGAAATTCCTTCGTCCTTCAGAGCTGGCAGAGCACAAGAACACTCACTTGAGGGTTAAATTCTATCCGTGTAGTGTATGTCCCAACTCATACAGCACTCCACAAAAACTGTCTGAGCATGTACAGCAGTCACATCCAGGGATTGGCGCAGTCGCGGCAACTGAGTCGGAATTCTTCTGCGACATCTGTATCAGAGCATTCAAAAGTCGCCAAGCTTACTCTAATCATATGCGTATTCACGCTAAAGTACCTACAACTAACAGGAAACCAGCTCCAGGTAAAGAGGGATTCGCACCTCAAATTATCGGGAAACCTATCAAACAATATCCTATGGTTCAACCTGGTTTTGTGTCATTTAAACCTAATTACAACATCCCTAACGCTCCTTATTCATGTGATATTTGTGGTAAAGGATTCATGCACAAGAAAAATATATGGAAACACAAGAAAGTATTGCATGCCGACATTTTAGTCGATAGACATGACAGTGAAGAGAACACTATGCAGGCTTCCACTGAAGAGGAGGAATTCAACCCTGATGAGAATGGTGCCGTTCTCTCAACGCCACaatttaatagttttattaactttacaaACTTCCCGAACAATGCTCAACAAACGCCATCACCAGATACAATGCCTTATGCGTGTGATTTATGCAGCAAACGGTTCCCGCTTAGGACCAGTTTATGGAAACACAAGCGCGCTAAACACGGAATCTTAAACCCTAGCGCTAGTAGTAACAACGATACATCCACACCGTCTGCTAGTGGTGAAGGCAGTAGTAGATCTAGCTGCACTATATGTAGAATCACATTTTCAGATAAGAAATCTTATTATCGTCATCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAAATATGTGGCAAGCCGCTAAGTTCAACTTTGGAACTGTACGAGCACTTGAAAGCCGCTCATGCAAGGGAACTACTGGGTTATAATGCTAACCAAGGCTCCAGTAAATCACAAGAAGTGTCACAAGAGGTTGAACCCGATTATGAAAATGATCAGGAGTCTGTCGACCCCAGCGTCGATTACCAAGCGCGCTACCCGTGCGATACTTGTGGCAAACAATTTGTGGGTTTGCTAGCGTTGCAAAACCACCAGTGCATTAATCAGATACAATCACAACCACAGACGTTTGACTGCGAAATTTGTCACAAGAGCTATACTTCAATATCTGCTCTAAAAAGCCATCGTGGGTGGCATTTACGTTCACCCGATGGAAAAGCAGCCGCCAACAATTCTGGCCTATGGATGCCCCAGCACAAAGTTACTAGCAAGATAAGCAAACACGAGGTCATCGACCCTTCACAACTTGCTAAGGTCACACATACCCCCACTCCCCCTCCTGTCACTGCTACCGCAGCGAAAAGAAGACTACCACCAGAGGTCGAAGTGACAGTCGTAAATCCAAACAAGAAACTGCGCTCAGACGACTCGGTTGACCTGGATATGCAAAGTACTGGTGCAATCGAGGATAGGTACTGTACGATTTGCGACAAGGAATTTACAAAACGCGCGGCGTATCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTATTTTGCCCGGTCTGTGATAAGAGTTTTACAAGGAAATCCACATTGCTCATTCACATGAAGAAACACTACGAGAGCGGTGAGGGTAGTTCCTCTGCTACAGGTCAAGGAGACGATGATTACTCCTGTGATTTGTGTGGCGCTCAGTATGACAATGATCAGGCGTTGCGGGCGCACCGAGCGCGGCACCATGGAGAAGATGAAGAGTCTGCGGAAGAGAGTGACGACGGAAATGTTCCTATTGCTCCTCCCGGTGAGTTCACCTGTGGACAATGCGGCGACGGCGTGGCTACACCAAGGGACCTCATCGCCCATCGCACAATGCACGCTACTCCCACCAAATTCTTCTGTAACATATGCAAGGTGTACTTCGCTCGGGCGCTTGACCTCTCCTCGCACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGGTTTTACATGAACAAGAAGAGTTTACAGCGGCACATCGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLQSLKDGSQLEEVKIKSEPLSDGAYDDGVVIDGSYPVIENAGFSNKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDVLQHSDHDSDTEAELQPEIDDDYVDCKNGYICKNKKVISKVPKLSTSVNNARVKEAFKLRKRKSEVPKHCSRPKNAWQLLFTDDLLELIVTSTNDNIVTNGKSFTESTSVSEIKTLIGILYLHGIMRPTHQKCSDLWNSECGVPCVRKIMKYERFKFLLQNMSFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKLVQHLAGTGRSIVMDSWFTSPSLMDSLKNEYQLYSIAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSVNVLTNEPRYYRKGHINHTTVVSVYKKNQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWCSQNSNVLQRRLFIKDLALSLLEPDEERMLISPISDLEERKNKFSLVRSNVQPYYKNRRRCKICVKTTKRDRRTRQFCVKCGTFICREHAGAESENNEEDEEEMNEPAQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFFNKNMPTKIMPINKVITPQKPIPIKTSKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPQQGDEEVDEEMQNNQSQNYDTVDMDSENEIEIARQHGIEHEGEEIVDGEENIDHDDDNNMEGAQSDNEKDGNDDTAESQENMEEEDSVDIKPEDQMKEDEGQEEVEHEELEINHNENEEEDDDDLPMSLAPVVEISEGLQADSFNSEVNEDDEELDETVDTNETIEDEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCSEKFGNMQDFNDHALAIHAGSFDQSDNQNKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQAADLNKHIYMEHSDRTLGMAPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAATESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPAPGKEGFAPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFINFTNFPNNAQQTPSPDTMPYACDLCSKRFPLRTSLWKHKRAKHGILNPSASSNNDTSTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQEVSQEVEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTPTPPPVTATAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQSTGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -