Basic Information

Insect: Agrotis ipsilon
Gene Symbol: Zfa
Assembly: GCA_028554685.1
Location: CM052968.1:11541315-11549678[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.007 0.71 11.4 1.1 3 23 650 671 649 671 0.96

2 23 0.23 23 6.7 0.3 1 22 1055 1076 1055 1076 0.95

3 23 8.1 8.2e+02 1.8 0.4 1 22 1118 1139 1118 1141 0.82

4 23 0.018 1.8 10.1 4.8 2 22 1151 1171 1150 1171 0.93

5 23 2.3 2.4e+02 3.5 0.0 3 23 1180 1201 1178 1201 0.89

6 23 0.019 1.9 10.0 0.2 3 23 1222 1243 1220 1243 0.96

7 23 0.0039 0.4 12.2 2.4 1 23 1249 1272 1249 1272 0.95

8 23 0.14 14 7.4 0.0 1 23 1298 1321 1298 1321 0.90

9 23 0.02 2.1 9.9 3.4 1 23 1326 1348 1326 1348 0.97

10 23 0.0093 0.94 11.0 0.2 1 23 1354 1377 1354 1377 0.95

11 23 0.0043 0.44 12.1 0.8 1 23 1390 1412 1390 1412 0.97

12 23 0.00019 0.019 16.3 1.8 1 23 1462 1485 1462 1485 0.97

13 23 0.00018 0.019 16.4 0.9 1 23 1545 1568 1545 1568 0.96

14 23 0.0026 0.26 12.8 2.1 2 23 1595 1617 1594 1617 0.95

15 23 0.043 4.3 8.9 0.1 2 23 1623 1645 1622 1645 0.94

16 23 0.011 1.1 10.8 0.2 1 21 1689 1709 1689 1710 0.95

17 23 0.00045 0.046 15.1 1.0 1 23 1720 1742 1720 1742 0.93

18 23 0.00012 0.012 16.9 0.3 2 23 1835 1857 1835 1857 0.93

19 23 4.3e-07 4.3e-05 24.7 1.4 3 23 1864 1884 1863 1884 0.98

20 23 0.024 2.4 9.7 0.3 1 23 1902 1924 1902 1925 0.95

21 23 0.2 20 6.8 0.0 1 23 1948 1970 1948 1970 0.97

22 23 0.03 3 9.4 0.6 1 23 1976 1999 1976 1999 0.95

23 23 0.00028 0.028 15.8 0.4 1 23 2007 2030 2007 2030 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.007	0.71	11.4	1.1	3	23	650	671	649	671	0.96
2	23	0.23	23	6.7	0.3	1	22	1055	1076	1055	1076	0.95
3	23	8.1	8.2e+02	1.8	0.4	1	22	1118	1139	1118	1141	0.82
4	23	0.018	1.8	10.1	4.8	2	22	1151	1171	1150	1171	0.93
5	23	2.3	2.4e+02	3.5	0.0	3	23	1180	1201	1178	1201	0.89
6	23	0.019	1.9	10.0	0.2	3	23	1222	1243	1220	1243	0.96
7	23	0.0039	0.4	12.2	2.4	1	23	1249	1272	1249	1272	0.95
8	23	0.14	14	7.4	0.0	1	23	1298	1321	1298	1321	0.90
9	23	0.02	2.1	9.9	3.4	1	23	1326	1348	1326	1348	0.97
10	23	0.0093	0.94	11.0	0.2	1	23	1354	1377	1354	1377	0.95
11	23	0.0043	0.44	12.1	0.8	1	23	1390	1412	1390	1412	0.97
12	23	0.00019	0.019	16.3	1.8	1	23	1462	1485	1462	1485	0.97
13	23	0.00018	0.019	16.4	0.9	1	23	1545	1568	1545	1568	0.96
14	23	0.0026	0.26	12.8	2.1	2	23	1595	1617	1594	1617	0.95
15	23	0.043	4.3	8.9	0.1	2	23	1623	1645	1622	1645	0.94
16	23	0.011	1.1	10.8	0.2	1	21	1689	1709	1689	1710	0.95
17	23	0.00045	0.046	15.1	1.0	1	23	1720	1742	1720	1742	0.93
18	23	0.00012	0.012	16.9	0.3	2	23	1835	1857	1835	1857	0.93
19	23	4.3e-07	4.3e-05	24.7	1.4	3	23	1864	1884	1863	1884	0.98
20	23	0.024	2.4	9.7	0.3	1	23	1902	1924	1902	1925	0.95
21	23	0.2	20	6.8	0.0	1	23	1948	1970	1948	1970	0.97
22	23	0.03	3	9.4	0.6	1	23	1976	1999	1976	1999	0.95
23	23	0.00028	0.028	15.8	0.4	1	23	2007	2030	2007	2030	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCCACCAATGTCTGCAGGAAATGCATGGATAATGTCAATAACTggcatgtttttaaaaatgtatgtgaAAGGACACAAAACAAACTACTGTCTTTAAAAGATGGCAACCAACTAGAAGAGgtaaaaataaaaagtgaaccACTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTTTTCAAACAAACTGCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGATCCAAGAATGGATTGGCACCGGGTCCATGCAATTTTGGACATGGTTCAAGAGGATGAGGTGATTGACTCTCTGCAGACAAGGGAAGAGTGTGATGTTCTGCAGCATTCTGACCATGACTCTGATAGTGAAGCCGAACTCCAGAAAGAAATTGATGATGGTTATGTTAATTCCAAAAGCGGATACatatgcaaaaataaacaagttatgTCAAAAGTTCCAAAACTATCAACTTCTGTATATAATGCTAGAGTAAGGGAACATTTCAAACTCAGAAAACGTAAATCAGAAGTTCGTAAGCATTTACCACGACCTAAAAATGCGTGGCAGTTGTTATTCACCGATGACCTACTAGAATTGATTGTTGCTTCTACTAATGACAATATTGTGACAAATGGGAAAAGTTTCACGGACTCAACGAGCGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATCTGCACGGCATAATGCGGCCAACGCATCAGAAATGTATTGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAATGTCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATAAGCTTCGATAAAGAGGACGACGACAGCATAATACAGTTTGACATAATGAAGCGTATGCGCAAAGTATTCGAAATTTTCGCCATGAATTGCAGAACATCTCACGAGATCGAGAATGTCGCAGTTATTGATGAGATCATTGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATTGATAAGAAGCCGCTGAAGAAGGGTATAAAAATGGTATTACTAGTTGATTCATCCACTTTCTATATGAGCAATTTAGACGTCATTACTGATGATTACTTTGGCGCCGAGGAGATAACAAAAAAGTTGGTTCAGCATTTAGCTGGAACTGGCAGATCTATTGTGATGGACAGTTGGTTCACGTCTTCATCGCTAATGGATATCCTTAAAAATGAGTATCAGTTGTATTGTATTGCAGCCTTGAACCCAAACAGTGGTATGATTCCACCACTGTTCCTATCACAGTACAGGAAATGTCGAACATTCATGTCTGGATTTATTGATCATGAAGTATCACTGACATCGTATGTCAATACTGAGGGGAAATCCATAAACGTATTGACTAATGAACCTAGATATTACAGGAAAGGTCATATAAATCACACTACAGTTGTGTCTGTGTATAAAAAGAATCAGTCTGCGGTAGAAGTTGTGGATGTTCTTATGAGTTACTATACCACGATGCAACATACAAATGATTGGACATTGTCTTTATTCTTTACTTTGCTAAACATAGCATCTGTTAACGCTCAGGGTGCGGAAAGTGAAAACAATGAAGAAGACGAGGAAGAAATGAACGAGCCGGCACAAAATTACCCGAAAATGCCACACATGCCCGAGGTGTCCATCACGGTCATGAGGCCTACTGGTGAGACTCTACACGCTCGTCAAGGCATTCACCAACTCGCGTCCAAACTGTGCCTCGTGTGCGGCCGCTCCTACAGGTACTCTCACAACGCACGTAGACATGAACTTACAGCTCACAGCTTCGACAGatacacaaacaaaattactcctaaaaaaacacttaatCATCTACAACCCAAACTCAGACCAAACCCATTCAATCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCATGAATAAGAACATGCCAACAAAAATAATGCCCATGAACAAAGTAATAACGCCTCAGAAACCCATTCCAATTAAGACGTCGACAAagacacaaaataatttgcCTTACCCTCTACGCATAAAAGCactcaaagatttacaaattaaGAAAAAGGAGCCTCAGATTCTGAAGACATTATTAACATCGAAACCTGAAGTTCTGGTCTCGGAACCAGAAATTCTAAATTCTGGGCCTGAAAGTCCAGAGACATTGATATCCGAGCCTGAAATTGCATCTTTTCAAGTGGAAGCTATTCTTGCTGAGCCCGATGCCGATGCATACGATGATCCACAGCAAGGCGAAGAAGAAGTCGATGAAGAAATGCAAaaccatcaaaatcaaaactatGATACAGTTGATATGGACTCTGAGAACGAAATAGAGATTGCTCGTCAGCAAAGTATTGAACAAGAGGGCGAGGAAAATGTTGATGGAGAAGAGAATGTGGACCATGATGACGATAATAACATGGAAGGCGGTCAGAGCGAAAACGAGAAAGACGCTAATGACGATACTGCTGATAGTCAAGAACACATGGAAGAGGAAGATGTTGATATTAAACCTGATGATAATGTAAAAGACGATGAGGGTCAGGAGGAGAGAGAACACGAAGAGGTAGAAATGAATCATAATGAAAACGAGGAAGACGACGATGATGACCTCCCAATGTCACTAGCCCCCGTCGTCGAAATAAGTGAGGGAATGCAAGGCGAGTCGTTTAATAGCGAAGTTAATGAAGAAGATGAGGAACTTGATGAAACTGTCGATCCTAATGACACCATTGAAGATGAGGAGCAGGTTAAAGAACTGGACCCTGACAAAACATATGTTACAAAAACCCAAAGAGACTTCATCCAAAAGTACCGTGACATCATTCAACAAATTAATACGAAGCGTTGTTTATGTTGTGATAGAGAACATCCACGTAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGTCACAAGGTTCCAAAACACACATGCTACAACTGTGTCATTACATTTGGACATATTGGCGCACTACTCAGCCATATGAGGTCGAATTCTTGCACGAATTTGTGGAAGATAATTTACAATGAAAATGGCATTACCGACGACTTGGTCCTCGAAGATGAACCAAAAGAGGTCAAAGTTGCATACAAAGATATTTTCAATGCCAGGTCATATGCTTGCAAACTGTGCCCAGCGAAATTCCAACTGAAACAATTTATAATGAAGCATGTCTTGGATACCCATGAAGATGGGCAGTCAAGGGTACCGCTCTGTTGTGTCCACTGCCGTTCTAGGTTTAAGGATAAGAGTTTACTTAAGAAACACATTCGTAAAGGTGATTGTACTGTATACATTGCCTGCGATTTGTGCTCTGAAAAGTTCGGAAACATGCAAGACTTCAACGACCATGCACTAGCCATCCACGCTGGCAGTTTTGATCAGACGGATAATCAGAGCAAATGTGTTGACGGTCGGCCAACAGACTGTCCCTTATGTGGAAAGAAAAACAGCAGCTACCCGAATTTAGTGAAACATTTGAAGATTATACATGCAGAGGAGAAACCTCATTACTGTCAGCATTGTGACGCTAAATACGAACAAGCTACTGAACTGAACAAACACATTTACATGGAGCACTCTGACAGAACATTAGGCATGCCGCCTGCTGAACCGGATATGTCCATAGTGAAAGAGGAAGCAGAGGAGTACCACTACTCTTGTACGGAATGTAATGCCATATTTGAAACTGTCGATGCGTGGACTGATCACCAAGTCGCTGAACATAACCAAGTGGCTCATCACTGCGATCAGTGTGAGAAGAAATTCCTTCGTCCTTCGGAGCTGGCAGAGCACAAGAACACGCACTTGCGGGTTAAATTTTATCCTTGTAGTGTGTGTCCGAACTCTTACAGCACGCCACAGAAACTGTCTGAGCATGTGCAACAGTCCCATCCTGGAATCGGTGCGGTCGCGGCAGCCGAGTCTGAATTCTTCTGTGACATCTGTATCAGAGCATTTAAAAGTCGCCAAGCGTACTCAAATCATATGCGTATTCACGCTAAAGTACCTACTACTAACAGGAAACCAGCTGTAATTAAAGAGGGATTCGCGCCTCAAATTATTGGAAAACCCATAAAGCAGTATCCTGTGGTTCAAACGGGTTTTGTATCGTTTAAACCTAATTACAACATCCCCAACGCTCCATATTCGTGTGACATTTGTGGTAAAGGATTCATGCATAAGAAAAATATATGGAAACATAAGAAAGTGTTACATGCTGATATTTTAGTTGATAGACATGATAGTGAAGAGAACACTATGCAAGCTTCCACGGAAGAGGATGAATTCAACCCGGACGAGAATGGTGCTGTACTCTCAACACCACAATTTAATAGTTTCAACTTTACGAATTTCCCGAACAATGCTCAACAATCGACTCCAGAAACAATGCCATATTCGTGTGAATTATGTGGCAAACGGTTCCCGCTTAGGACCAGTTTGTGGAAACACAAGCGCGCCAAACACGGAATTGTTAACCCTGGCACAAGCGGCAGCAACGAGACATCCACACCATCCGCTAGTGGGGAAAGCAGTAGTAGATCTAGCTGCACTATATGCAGAATCACATTTTCAGATAAAAAATCTTACTATCGCCACCGAAAGAATGTGCACAAATCTACCGTTCAAATGTGCAAAATATGTGGTAAACCCCTAAGTTCAACTTTAGAATTATATGAGCATTTGAAAGCTGCTCATGCAAGGGAATTACTAGGATACAACGCTAACCAAGGCTCTAGTAAATCACAAGATGTGTCACAGGAGATGGAACCTGATTATGAAAATGATCAAGAGTCTGTCGACCCCAGCGTTGATTACCAGGCGCGTTACCCGTGCGATACCTGTGGCAAACAATTTGTTGGGTTGCTAGCGTTGCAGAACCATCAGTGTATCAATCAGATACCATCTCAGCCACAGACGTTTGATTGTGAGATTTGTCACAAGAGTTACACTTCAATATCTGCACTAAAAAGCCATCGAGGTTGGCATTTACGTTCACCTGATGGAAAAGCAGCCGCTAATAATTCTGGCCTGTGGATGCCCCAGCACAAAGTTACAAGCAAGATAAGCAAACACGAGGTCATAGACCCGTCACAACTAGCTAAGGTTACACATACCTCCACTCCCCCACCCGTCTCTGCTACCGCAGCGAAAAGAAGACTGCCACCAGAGGTCGAAGTGACAGTCGTAAATCCGAATAAGAAATTGCGCTCAGACGATTCAGTCGACTTAGACATGCAAAATTCAGGTGCAATCGAGGATAGGTATTGTACTATTTGTGACAAGGAATTTACAAAACGAGCGGCGTACCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTGTTTTGCCCGGTCTGTGATAAAAGTTTCACAAGGAAGTCCACACTGCTTATTCACATGAAGAAACATTACGAGAGCGGTGAGGGCAGTTCCTCTGCTACAGGTCAAGGGGACGATGATTACTCCTGTGATTTGTGTGGAGCTCAGTATGACAATGATCAGGCGTTGAGGGCGCACCGAGCGCGGCACCACGGAGAAGAGGAAGAGTCGGCTGAAGAGAGTGATGATGGAAATGTTCCTATTGCTCCTCCCGGTGAATTCACATGTGCGCAATGTGGCGATGGCGTCGCTACGCCGAGGGACCTCATCGCCCATCGCACAATGCATGCTACTCCCACCAAATTCTTCTGTAACATATGCAAAGTGTACTTCGCTCGGGCGCTCGACCTCTCGTCTCATACTCGTGCGCGGCACGCTGACAATGATAAGGTATTCTTCCCTTGTGCCATGTGCGACAGGTTTTATATGAACAAGAAGAGCTTACAGCGGCACATCGAGATGGCTCATTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLLSLKDGNQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAGFSNKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQEDEVIDSLQTREECDVLQHSDHDSDSEAELQKEIDDGYVNSKSGYICKNKQVMSKVPKLSTSVYNARVREHFKLRKRKSEVRKHLPRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSFTDSTSVSEIKTLIGILYLHGIMRPTHQKCIDLWNSECGVPCVRNVMKYERFKFLLQNISFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKKGIKMVLLVDSSTFYMSNLDVITDDYFGAEEITKKLVQHLAGTGRSIVMDSWFTSSSLMDILKNEYQLYCIAALNPNSGMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSINVLTNEPRYYRKGHINHTTVVSVYKKNQSAVEVVDVLMSYYTTMQHTNDWTLSLFFTLLNIASVNAQGAESENNEEDEEEMNEPAQNYPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMPMNKVITPQKPIPIKTSTKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILAEPDADAYDDPQQGEEEVDEEMQNHQNQNYDTVDMDSENEIEIARQQSIEQEGEENVDGEENVDHDDDNNMEGGQSENEKDANDDTADSQEHMEEEDVDIKPDDNVKDDEGQEEREHEEVEMNHNENEEDDDDDLPMSLAPVVEISEGMQGESFNSEVNEEDEELDETVDPNDTIEDEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCSEKFGNMQDFNDHALAIHAGSFDQTDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATELNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPAVIKEGFAPQIIGKPIKQYPVVQTGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEDEFNPDENGAVLSTPQFNSFNFTNFPNNAQQSTPETMPYSCELCGKRFPLRTSLWKHKRAKHGIVNPGTSGSNETSTPSASGESSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDVSQEMEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTSTPPPVSATAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQNSGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNDQALRAHRARHHGEEEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -