Basic Information

Insect: Diarsia brunnea
Gene Symbol: -
Assembly: GCA_949774965.1
Location: OX459002.1:6782583-6791125[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.011 1 10.9 1.6 3 23 582 603 581 603 0.96

2 23 0.031 2.9 9.5 0.6 1 22 986 1007 986 1007 0.95

3 23 8.5 8.2e+02 1.8 0.4 1 22 1049 1070 1049 1072 0.82

4 23 0.004 0.38 12.3 4.0 2 22 1082 1102 1081 1102 0.93

5 23 1.5 1.5e+02 4.2 0.0 3 23 1111 1132 1109 1132 0.89

6 23 0.02 1.9 10.1 0.2 3 23 1153 1174 1151 1174 0.96

7 23 0.0038 0.36 12.4 2.5 1 23 1180 1203 1180 1203 0.95

8 23 0.14 14 7.4 0.0 1 23 1229 1252 1229 1252 0.90

9 23 0.047 4.5 8.9 3.3 1 23 1257 1279 1257 1279 0.97

10 23 0.0093 0.89 11.1 0.1 1 23 1285 1308 1285 1308 0.95

11 23 0.01 1 11.0 1.1 1 23 1321 1343 1321 1343 0.97

12 23 0.0002 0.019 16.4 1.8 1 23 1395 1418 1395 1418 0.97

13 23 0.0015 0.14 13.6 1.3 1 23 1478 1501 1478 1501 0.96

14 23 0.0023 0.22 13.1 2.0 2 23 1526 1548 1525 1548 0.95

15 23 0.045 4.3 9.0 0.1 2 23 1554 1576 1553 1576 0.94

16 23 0.011 1.1 10.9 0.2 1 21 1620 1640 1620 1641 0.95

17 23 0.00055 0.053 15.0 0.4 1 23 1651 1673 1651 1673 0.93

18 23 0.00013 0.012 17.0 0.3 2 23 1766 1788 1766 1788 0.93

19 23 4.5e-07 4.3e-05 24.7 1.4 3 23 1795 1815 1794 1815 0.98

20 23 0.0064 0.62 11.6 0.3 1 23 1833 1855 1833 1856 0.95

21 23 0.21 20 6.9 0.0 1 23 1879 1901 1879 1901 0.97

22 23 0.031 3 9.5 0.6 1 23 1907 1930 1907 1930 0.95

23 23 0.00029 0.028 15.9 0.4 1 23 1938 1961 1938 1961 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.011	1	10.9	1.6	3	23	582	603	581	603	0.96
2	23	0.031	2.9	9.5	0.6	1	22	986	1007	986	1007	0.95
3	23	8.5	8.2e+02	1.8	0.4	1	22	1049	1070	1049	1072	0.82
4	23	0.004	0.38	12.3	4.0	2	22	1082	1102	1081	1102	0.93
5	23	1.5	1.5e+02	4.2	0.0	3	23	1111	1132	1109	1132	0.89
6	23	0.02	1.9	10.1	0.2	3	23	1153	1174	1151	1174	0.96
7	23	0.0038	0.36	12.4	2.5	1	23	1180	1203	1180	1203	0.95
8	23	0.14	14	7.4	0.0	1	23	1229	1252	1229	1252	0.90
9	23	0.047	4.5	8.9	3.3	1	23	1257	1279	1257	1279	0.97
10	23	0.0093	0.89	11.1	0.1	1	23	1285	1308	1285	1308	0.95
11	23	0.01	1	11.0	1.1	1	23	1321	1343	1321	1343	0.97
12	23	0.0002	0.019	16.4	1.8	1	23	1395	1418	1395	1418	0.97
13	23	0.0015	0.14	13.6	1.3	1	23	1478	1501	1478	1501	0.96
14	23	0.0023	0.22	13.1	2.0	2	23	1526	1548	1525	1548	0.95
15	23	0.045	4.3	9.0	0.1	2	23	1554	1576	1553	1576	0.94
16	23	0.011	1.1	10.9	0.2	1	21	1620	1640	1620	1641	0.95
17	23	0.00055	0.053	15.0	0.4	1	23	1651	1673	1651	1673	0.93
18	23	0.00013	0.012	17.0	0.3	2	23	1766	1788	1766	1788	0.93
19	23	4.5e-07	4.3e-05	24.7	1.4	3	23	1795	1815	1794	1815	0.98
20	23	0.0064	0.62	11.6	0.3	1	23	1833	1855	1833	1856	0.95
21	23	0.21	20	6.9	0.0	1	23	1879	1901	1879	1901	0.97
22	23	0.031	3	9.5	0.6	1	23	1907	1930	1907	1930	0.95
23	23	0.00029	0.028	15.9	0.4	1	23	1938	1961	1938	1961	0.96

Sequence Information

Coding Sequence: ATGAATGTAAACTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTTCCGTCCTCGCTTTGAAAATCAAGGACTGTGTGTCTGTACAGATAAACGAAAATGACGACCTGCCCACCAATGTCTGCAGGAAATGCATGGACAATGTCAATAACtggcatgtttttaaaaatatatgtgaAAGGACACAAAACAAACTACTGTCTCTAAAAGATGGCAACCAACTAGAAGAGgtgaaaataaaaaacgaacCACTGTCTGATGAGGTTTATGATGATGGAGTGATCATTGATGGCTCATATCCTGTCATTGAGAATGCGGGCTATTCAAACAAAGTGCAGCCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGACCCGCGAATGGATTGGCACCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAGACAAGGGAAGAGTGTGATGTTTTGCAGCATTCTGACCATGACTCGGATACTGAAGCCGAACTCCAAACAGAAATTGATGACAGTTATGTTAATAGCAAAAGCGGAtatatttgcaaaaataaacaagttatgTCAAAAGTTCCACAACTATCAACTTCTGTAAATAATGCCAGAGTAAAAGAAGCTTTCAAACTCAGGAAACGCAAATCAGAAGTTCGTAAACATTGTTCACGACCGAAAAATGCGTGGCAGTTGTTATTCACTGATGACCTACTAGAGTTGATTGTTGCTTCTACAAATGACAATATTATGACAAATGGGAAAAGTTTCACGGAGTCTACGAGCGTCAGCGAAATTAAAACGATTATCGGTATTCTGTATTTACACGGCATAATGCGGCCGACGCATCAGAATTGTAGTGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAATATCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATGAGCTTCGACAAAGAGGACGACAACAGCATTATACAGTTTGACATAATGAAGCGTATGCGCAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACATCTTTCGAGATCGAGAATGTCGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGACATCGATAAGAAACCGCTGAAGCGAGGGTTAAAGGTGGTATTGCTGGTTGATTCATCCACATTCTATATGAGCAATTTAGACGTCATCACTGACCTCTACTTCGGTGCCAAGGATATAACGAAAAAAATGGTTCAGCATTTGGCTGGTACTGGCAGAACTATTGTTATGGACAGTTGGTTCACTTCTTCTTCACTGATGGATACCCTTAAAAATGAGTATCAGTTGTATTCTATCGCAGCTTTGAACCCAAACAGTGATATGATTCCGCCACTCTTCCTGTCTCAGTACAGGAAATGTCGAACATTCATGTCTGGATTTATTGATCATGAAGTATCACTGACATCGTATGTCAATACTGAGGGGAAATCCGGTGCGGAGAGTGAGAACAATGAAGAAGACGAGGAAGAAATTAGCGAACCCGCACAAAATTTTCCAAAAATGCCCCACATGCCCGAGGTGTCCATCACAGTCATGAGGCCTACTGGTGAGACCCTGCACGCTCGCCAAGGTATTCACCAACTCGCTTCGAAACTGTGCCTCGTCTGCGGCCGCTCCTACAGGTACTCTCACAACGCACGCAGACATGAACTTACCTCTCACAGCTTCGACAgatatacaaacaaaattacTCCAAAAAAAACCCTCAATCATCTACAACCCAAACTGAGACCGAACCCGTTCAACCCCAAAGCACGAATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCATGAACAAGAACATGTCAACAAAAATAATGCCCCTAAACAAAGTTATAACGCCACAGAAACCCATTCCAATAAAGACGTCGTCAAAGACACAAAATAATTTGCCTTATCCTCTACGCATTAAAGCactcaaagatttacaaattaaGAAGAAGGAGCCTCAGATTCTTAAGACTTTATTAACCACTAAACCTGAAGTTCTGGTCTCAGAACCAGAAATTCTAAATTCTGGGCCTGAAAGTCCAGAAACATTGATATCTGAGCCTGAAATTGCATCTTTTCAAGTTGAAACTATCCTTACGGAACCGGATGCCGATGCATACGATGATCAAGGCGACGAAGAAGTCGATGAAGAAATGCAgaacaatcaaaatcaaaactatgATACTGTCGATATGGACTCTGAGAACGAAATAGAGATTGCTCGTCAGCAAAGCAGTGAACACGACGGCGAGGAAAATGCCGATGGGGACGAAATTATGGACCATGATGACGACAATAATATGGATGGCGGTCAGAGCGATAACGAGAAAGATGCCAATGACGATACAGCCGATAGTCAAGAGAACATAGAAGAAGATAGTGTTGATATTAAACCTGAAGACCAAATAAAGGAAGAAGACGGCCAAGAGGATGGAGAACACGAAGAAGAAGTAGAAATGAATCATAATGATAACGAAGAAGAAGACGATGATGACCTGCCTATGTCTATAGCGCCCGTAGTGGAAATAAGTGAGGGATTGCACGGCGACTCGTTCAACAGCGAAGTCATGGAGGAAGAGGAGGAGCTCGACGAGACTGTGGATCCCAATGAGATCATTCAAGAGGAAGAGCAGGTTAAAGAACTTGACCCTGACAAAACGTATGTTACGAAAACCCAAAGAGACTTCATCGAAAAATTCCGTGATATCATTCAGCAAGTCAACACTAAGCGTTGTTTATGTTGTGATCGAGAACATCCGCGCAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGACACAAGGTACCAAAACACACATGCTACAATTGTGTCATCACTTTCAGTCATATTGGCGCACTACTCAGCCATATGAGGTCGAACTCTTGCACCAATCTGTGGAAGATTATTTACAATGAAAATGGCATTACGGACGACCAAGTTCTCGAAGATGAGCCGAAAGAAGTCAAGGTTGCTTACAAAGATATTTTCAATGCCAGGTCGTATGCTTGCAAACTCTGCCCAGCTAAATTCCAACTGAAACAGTTTATAATGAAGCATGTTTTGGATACCCATGAGGATGGACAGGCAAGGATACCACTCTGTTGTGTCCACTGCCGCGCTAGATTCAAAGATAAGAGTTTACTAAAGAAACATATCCGTAAAGGCGATTGTACAGTTTATATTGCTTGCGATTTGTGCTCTGAAACGTTCGGGAACGTGCAGGACTTCAACGACCATGCGCTAGCAATCCACGCCGGCAGTCTCGATCAGTCGGATAATCAAAGCAAATGTGTTGACGGTCGACCAACAGACTGTCCTTTGTGTGGAAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATACATGCTGAGGAAAAACCTCACTACTGCCAGCATTGCGACGCGAAATACGAACAAGCTACTGATCTGAACAAGCACATTTACATGGAGCATTCTGATAGAACACTAGGCATGCCGCCTGCTGAACCGGATATGTCCATAGTGAAGGAGGAAGCTGAGGAGTACCACTACTCCTGCACGGAATGTAATGCCATATTCGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCTGAACATAACCAAGTtgcccaccactgtgatcagtGTGAGAGGAAATTCCTTCGGCCTTCCGAGCTAGCAGAGCACAAGAACACTCATTTGAGGGTTAAGTTTTATCCTTGTAGTGTATGTCCCAACTCTTACAGCACTCCACAGAAACTGTCTGAGCATGTGCAACAGGCACATCCAGGAGTTGGCGCGGTCGCGGCAGGAGAGTCAGAATTCTTCTGCGACATGTGTATCAGAGCATTCAAGAGTCGCCAAGCTTACTCAAATCATATGCGTATTCACTCGAAAATACCTACTACTAACAGGAAACCGGCTCCAATCAAGGGGGAGGGGGGATTCGCACCTCAAATTATCGGGAAGCCCATCAAGCAGTATCCTATGGTTCAACCTGGTTTTGTATCATTTAAATCTAATTACAACATCCCTAACGCTCCATATTCTTGTGACATTTGTGGTAAAGGATTCATGCATaagaaaaatatatggaaaCACAAGAAAGTTTTGCATGCTGATATTTTAATCGATAGACATGATAGTGAAGAGAACACTATGCAAGCTTCCACAGAAGAGGATGAATTTAACCCTGATGAGAACGGTGCCATTCTCTCGACGCCacaatttaatagttttaacttTACGAATTTCCCGAACAATGCTCAACAATCAACACCAGAACCATTGCCATACTCGTGTGAATTATGTAGCAAACGGTTCCCGCTTAAAAACAGTTTATGGAAACACAAGCGCGCAAAACACGGTATTGTAAACCCTGGCACTAGTGGTAGCAACGATACGCCTTCCGCTAGCGGGGAAAGCAGTAGTCGATCTAGCTGCACCATATGCAGAATATCATTTTCAGATAAGAAATCTTACTATCGCCATCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAAATATGTGGCAAACCGCTAAGTTCAACTTTGGAATTATACGAGCACTTGAAAGCTGCTCATGCAAGGGAGTTACTGGGCTATAACGCTAACCAAGGCTCCAGTAAATCACAAGACATGTCACTAGAGATGGAACCAGATTATGAAAATGATCAGGAGTCGGTCGACCCCAGCGTTGATTACCAAGCGCGGTATCCGTGTGATACTTGTGGCAAACAGTTTGTTGGTTTGCTAGCTTTGCAAAACCACCAGTGCATCAATCAGATATCATCACAGCCACAGACGTTTGACTGCGAGATTTGTAAAAAGAGTTACACTTCCATATCTGCGCTAAAAAGCCATCGTGGGTGGCATTTACGTTCGCCCGATGGAAAAGCTGCCGCCAACAATTCTGGCCTGTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGCAAACATGAGGTTGTGGACGCGTCTCAACTGGCTAAGGTCACACACACCCCCACTCCCGCACCTGTAACTGCTACCGCAGCCAAAAGAAGACTACCGCCAGAGGTCGAAGTGACAGTCGTAAATCCGAACAAGAAACTACGCTCAGACGACTCGGTGGACATGGATATGCAAAGTTCTGGTGCCGTCGAGGATAGGTACTGTACGATTTGCGATAAGGAATTCACAAAACGAGCGGCGTACCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTGTTTTGCCCGGTCTGCGATAAGAGTTTTACAAGGAAGTCCACATTGCTCATTCACATGAAAAAACATTATGAGAGTGGTGAGGGCAGTTCTTCTGCTACAGGTCCAGGAGACGATGATTACTCCTGTGATCTGTGTGGAGCTCAGTATGACAATGAACAGGCATTAAGGGCGCACCGAGCGCGGCACCACGGAGAAGATGAAGAGTCGGCCGAAGAGAGTGACGACGGAAATGTTCCTATTGCTCCTCCCGGTGAATTCACCTGTGCGCAATGTGGCGATGGCGTCGCTACTCCCAGGGACCTCATCGCCCATCGCACAATGCACGCTACTCCCACCAAATTCTTCTGTAACATCTGTAAAGTGTACTTCGCTCGGGCGCTCGATCTCTCGTCGCACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGGTTTTACATGAACAAGAAGAGCTTACAGAGGCACATTGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPSVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNICERTQNKLLSLKDGNQLEEVKIKNEPLSDEVYDDGVIIDGSYPVIENAGYSNKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTREECDVLQHSDHDSDTEAELQTEIDDSYVNSKSGYICKNKQVMSKVPQLSTSVNNARVKEAFKLRKRKSEVRKHCSRPKNAWQLLFTDDLLELIVASTNDNIMTNGKSFTESTSVSEIKTIIGILYLHGIMRPTHQNCSDLWNSECGVPCVRNIMKYERFKFLLQNMSFDKEDDNSIIQFDIMKRMRKVFEIFAMNCRTSFEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGLKVVLLVDSSTFYMSNLDVITDLYFGAKDITKKMVQHLAGTGRTIVMDSWFTSSSLMDTLKNEYQLYSIAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSGAESENNEEDEEEISEPAQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMSTKIMPLNKVITPQKPIPIKTSSKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILTEPDADAYDDQGDEEVDEEMQNNQNQNYDTVDMDSENEIEIARQQSSEHDGEENADGDEIMDHDDDNNMDGGQSDNEKDANDDTADSQENIEEDSVDIKPEDQIKEEDGQEDGEHEEEVEMNHNDNEEEDDDDLPMSIAPVVEISEGLHGDSFNSEVMEEEEELDETVDPNEIIQEEEQVKELDPDKTYVTKTQRDFIEKFRDIIQQVNTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRSNSCTNLWKIIYNENGITDDQVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQARIPLCCVHCRARFKDKSLLKKHIRKGDCTVYIACDLCSETFGNVQDFNDHALAIHAGSLDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATDLNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCERKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQAHPGVGAVAAGESEFFCDMCIRAFKSRQAYSNHMRIHSKIPTTNRKPAPIKGEGGFAPQIIGKPIKQYPMVQPGFVSFKSNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILIDRHDSEENTMQASTEEDEFNPDENGAILSTPQFNSFNFTNFPNNAQQSTPEPLPYSCELCSKRFPLKNSLWKHKRAKHGIVNPGTSGSNDTPSASGESSSRSSCTICRISFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDMSLEMEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQISSQPQTFDCEICKKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDASQLAKVTHTPTPAPVTATAAKRRLPPEVEVTVVNPNKKLRSDDSVDMDMQSSGAVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGPGDDDYSCDLCGAQYDNEQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: -
80% Identity: -