Basic Information

Insect: Apamea crenata
Gene Symbol: Zfa
Assembly: GCA_949629185.1
Location: OX451357.1:7282420-7291070[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.011 1 10.9 1.6 3 23 584 605 583 605 0.96

2 23 0.25 23 6.7 0.3 1 22 989 1010 989 1010 0.95

3 23 8.9 8.1e+02 1.8 0.4 1 22 1052 1073 1052 1075 0.82

4 23 0.02 1.8 10.2 4.8 2 22 1085 1105 1084 1105 0.93

5 23 2.6 2.3e+02 3.5 0.0 3 23 1114 1135 1112 1135 0.89

6 23 0.021 1.9 10.1 0.2 3 23 1156 1177 1154 1177 0.96

7 23 0.0039 0.36 12.4 2.5 1 23 1183 1206 1183 1206 0.95

8 23 0.15 14 7.4 0.0 1 23 1232 1255 1232 1255 0.90

9 23 0.022 2 10.0 3.4 1 23 1260 1282 1260 1282 0.97

10 23 0.01 0.93 11.1 0.2 1 23 1288 1311 1288 1311 0.95

11 23 0.0048 0.44 12.1 0.8 1 23 1324 1346 1324 1346 0.97

12 23 0.00021 0.019 16.4 1.8 1 23 1396 1419 1396 1419 0.97

13 23 0.0032 0.29 12.7 0.9 1 23 1482 1505 1482 1505 0.95

14 23 0.0028 0.26 12.8 2.1 2 23 1532 1554 1531 1554 0.95

15 23 0.047 4.3 9.0 0.1 2 23 1560 1582 1559 1582 0.94

16 23 0.012 1.1 10.9 0.2 1 21 1626 1646 1626 1647 0.95

17 23 0.0005 0.045 15.2 1.0 1 23 1657 1679 1657 1679 0.93

18 23 0.00013 0.012 17.0 0.3 2 23 1772 1794 1772 1794 0.93

19 23 4.7e-07 4.3e-05 24.7 1.4 3 23 1801 1821 1800 1821 0.98

20 23 0.026 2.4 9.8 0.3 1 23 1839 1861 1839 1862 0.95

21 23 0.14 13 7.5 0.0 1 23 1885 1907 1885 1907 0.97

22 23 0.033 3 9.5 0.6 1 23 1913 1936 1913 1936 0.95

23 23 0.0003 0.028 15.9 0.4 1 23 1944 1967 1944 1967 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.011	1	10.9	1.6	3	23	584	605	583	605	0.96
2	23	0.25	23	6.7	0.3	1	22	989	1010	989	1010	0.95
3	23	8.9	8.1e+02	1.8	0.4	1	22	1052	1073	1052	1075	0.82
4	23	0.02	1.8	10.2	4.8	2	22	1085	1105	1084	1105	0.93
5	23	2.6	2.3e+02	3.5	0.0	3	23	1114	1135	1112	1135	0.89
6	23	0.021	1.9	10.1	0.2	3	23	1156	1177	1154	1177	0.96
7	23	0.0039	0.36	12.4	2.5	1	23	1183	1206	1183	1206	0.95
8	23	0.15	14	7.4	0.0	1	23	1232	1255	1232	1255	0.90
9	23	0.022	2	10.0	3.4	1	23	1260	1282	1260	1282	0.97
10	23	0.01	0.93	11.1	0.2	1	23	1288	1311	1288	1311	0.95
11	23	0.0048	0.44	12.1	0.8	1	23	1324	1346	1324	1346	0.97
12	23	0.00021	0.019	16.4	1.8	1	23	1396	1419	1396	1419	0.97
13	23	0.0032	0.29	12.7	0.9	1	23	1482	1505	1482	1505	0.95
14	23	0.0028	0.26	12.8	2.1	2	23	1532	1554	1531	1554	0.95
15	23	0.047	4.3	9.0	0.1	2	23	1560	1582	1559	1582	0.94
16	23	0.012	1.1	10.9	0.2	1	21	1626	1646	1626	1647	0.95
17	23	0.0005	0.045	15.2	1.0	1	23	1657	1679	1657	1679	0.93
18	23	0.00013	0.012	17.0	0.3	2	23	1772	1794	1772	1794	0.93
19	23	4.7e-07	4.3e-05	24.7	1.4	3	23	1801	1821	1800	1821	0.98
20	23	0.026	2.4	9.8	0.3	1	23	1839	1861	1839	1862	0.95
21	23	0.14	13	7.5	0.0	1	23	1885	1907	1885	1907	0.97
22	23	0.033	3	9.5	0.6	1	23	1913	1936	1913	1936	0.95
23	23	0.0003	0.028	15.9	0.4	1	23	1944	1967	1944	1967	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCCACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCaagtttttaaaaatgtttgtgaaAGGACACAAAACAAACTACTGTCTCTAAAAGATGGCAGCCAACTAGAAGAGgtgaaaataaaaagtgaacCACTATCTGATGGGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTTCTCAAACAAAATACAACCTGAAGGTCCCCCAATCTTGGCTTCGTTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGACCCGCGAATGGATTGGCATCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAGACAAAGGAAGAGTGTGATGTTTTGCAACATTCTGATCATGACTCGGGCACAGAAGCCGAACTCCAACCAGAAATTGATGATGATTACGTTGATTGCAAAAGCGGATAcatatgcaaaaataaaaaagttatatcaAAAGTTCCAAAACTATCAACTTCTGTAAATAATGCCAGAGTCAAAGAAGCTTTCCAACTTAGGAAACGCAAATCAGAAGTTCGTAAACATTGTTCACGACCTAAAAATGCGTGGCAGTTGTTATTCACTGATGACCTACTAGAATTGATTGTTGCTTCTACTAATGACAATATTGTGACAAATGGGAAAAGTTTCACGGAGTCGACCAGTGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATCTGCACGGCATAATGCGGCCGACGCATCAGAAATGCAGTGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAATGTCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATGAGCTTCGATAAAGAGGACGACAATAGCATTATACAGTTCGACATAATGAAGCGTATGCGTAAAGTATTCGAAATTTTTGCCATGAATTGCAGAACATCTCACGAGATCGAGAATGTCGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATTGATAAGAAGCCGCTGAAGCGGGGCATAAAGATGGTATTGCTAGTTGATTCATCCACTTTCTATATGAGCAATTTAGACGTCATTACTGATCCTTATTTTGGCGCCGAAGAGATAACGAAAAAGTTGGTGCAGCATTTAGCTGGAACTGGCAGATCTATTGTTATGGATAGTTGGTTCACATCTTCCTCATTGATGGATAGCCTTAAAAATGAGTACCAGTTGTATTCTATTGCAGCCTTGAACCCAAACAGTGATATGATTCCGCCACTGTTCCTATCTCAATACAGGAAATGTCGAACATTTATGTCTGGATTTATTGATCATGAAGTATCACTGACATCTTATGTCAATACTGAGGGGAAATCAGTTAATGGTGCGGAGAGTGAGAACAATGAAGAAGACGAGGAAGAAATGAACGAGCCCGCACAAAATTTCCCGAAAATGCCCCACATGCCCGAGGTGTCCATCACGGTGATGAGGCCTACTGGTGAAACCCTGCATGCTCGCCAAGGTATTCACCAACTCGCCTCCAAACTGTGCCTCGTCTGCGGCCGCTCCTACAGGTACTCCCACAACGCACGCAGACATGAACTTACGTCGCACAGCTTCGACagatatacaaacaaaattactCCTAAAAAAACCCTCAATCATCTACAACCCAAACTCAGACCGAACCCATTCAATCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCTTTAACAAGAACACGCCTACAAAAATAATGCCCATAAACAAAGTTATAACGCCTCAGAAACCCATTCCAATAAAGACGTCAAAGACACAAAATAATTTGCCTTATCCTCTACGCATTAAAGCACTCAAAGATTTACAAATTAAGAAAAAGGAGCCTCAGATTCTGAAGACTTTGTTAACCTCCAAACCTGAAGTTCTGGTTTCCGAACCAGAAATTTTAAATTCCGGGCCTGAAAGTCCAGAAACATTGATATCTGAGCCTGAAATTGCGTCTTTTCAAGTCGAAGCTATTCTTACGGAACCTGATGCCGATGCATACGATGATCCACAACAAGGCGACGAAGAAGTCGATGAAGAAATGCAGAACAATCAAGGTCAAAACTATGACACAGTCGATATGGACTCTGAGAATGAAATAGAAATTGCTCGTCAGCACGGCATTGAACACGAAGGTGAGGAAATAGTTGACGGGGAAGAGAATATCGACCacgatgatgataataatatggaAGGCGCTCAAAGCGATAACGAGAAAGACGGCAATGACGATACAGCTGAAAGTCAAGAGAACATGGAGGAAGAAGATAGTGTTGATATTAAACCTGAAGACCAAATGAAGGACGACGAAGGCCAAGAGGAGGTAGAACACGAAGAATTAGAAATAAATCACAACGAAAACGAggaagaagatgatgatgaccttccAATATCATTAGCGCCCGTCGTCGAAATAAGTGAGGGGTTACAAGCCGACTCATTTAACAGCGAAGTCAATGAAGATGACGAGGAACTCGACGAAACTGTCGATAACAATGAAACCATTGAAGATGAGGAGCAAGTCAAAGAACTTGACCCTGACAAAACTTATGTTACGAAAACCCAAAGAGACTTCATCCAGAAATATCGCGACATAATTCAACAAATTAACACGAAGCGTTGCTTATGTTGCGATCGAGAACATCCGCGCAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGACATAAGGTACCAAAACACACTTGTTACAACTGTGTCATCACATTCGGACATATTGGCGCTCTACTTAGTCATATGAGGTCGAATTCTTGCACTAATTTGTGgaagattatttataatgaaaatgGCATTACTGACGACTTGGTTCTCGAAGATGAGCCGAAAGAGGTGAAGGTTGCATACAAAGATATTTTCAATGCCAGGTCATACGCTTGCAAGCTCTGTCCTGCTAAGTTCCAACTGAAACAGTTTATAATGAAGCATGTTTTGGATACTCATGAGGATGGTCAGTCAAGGGTGCCGCTCTGTTGTGTCCACTGCCGTTCTAGATTCAAAGATAAGAGCTTACTAAAGAAGCACATTCGTAAAGGTGATTGTACAGTTTATATAGCTTGCGATTTGTGCTCAGAAAAGTTCGGGAACATGCAGGACTTCAACGACCATGCGCTAGCTATCCATGCTGGCAGTTTCGATCAGTCGGATAATCAGAACAAATGTGTTGACGGTCGACCAACAGACTGTCCCCTGTGCGGAAAGAAAAACAGCAGCTATCCGAATTTAGTGAAAcatttgaagattatccatgCGGAAGAGAAACCTCACTACTGTCAGCATTGCGACGCTAAATACGAACAAGCTACTGATCTGAACAAACACATTTACATGGAGCATTCTGACAGAACATTGGGCATGGCGCCCGCTGAACCAGATATGTCCATAGTTAAGGAAGAAGCAGAGGAGTACCATTACTCCTGTACGGAATGTAATGCCATATTCGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCCGAACATAACCAAGTGGCCCACCACTGTGACCAGTGTGAAAAGAAATTCCTTCGTCCTTCAGAGCTGGCAGAGCACAAGAACACTCACTTGAGGGTTAAATTCTATCCGTGTAGTGTATGTCCCAACTCATACAGCACTCCACAAAAACTGTCTGAGCATGTACAGCAGTCACATCCAGGGATTGGCGCAGTCGCGGCAACTGAGTCGGAATTCTTCTGCGACATCTGTATCAGAGCATTCAAAAGTCGGCAAGCTTACTCAAATCATATGCGTATTCACgctaaagtacctactactaacAGGAAACCAGCTCCAGGAAAAGAGGGATTCGCACCTCAAATTATCGGGAAACCTATCAAACAATATCCGATGGTTCAACCTGGTTTTGTGTCATTTAAACCTAATTACAACATCCCCAACGCTCCTTATTCATGTGACATTTGTGGTAAAGGATTCATGCACAAGAAGAATATATGGAAACACAAGAAAGTGTTGCATGCCGACATTTTAGTCGATAGACATGACAGTGAAGAGAACACTATGCAGGCTTCCACTGAAGAGGAGGAATTCAACCCTGATGAGAATGGTGCCGTTCTCTCAACGCCACaatttaatagttttattaacTTTACGAACTTCCCGCCGAACAATGCTCAACAAACGCCATCACAAGATACAATGCCTTATGCGTGTGATTTATGCAGCAAACGGTTCCCGCTTAGGACCAGTTTATGGAAACACAAGCGCGCTAAACACGGAATCTTAAACCCTAGCGCCAGTAGTAGCAACGATACATCCACACCGTCCGCTGCTGGGGAAGGCAGTAGTAGATCTAGCTGCACTATATGTAGAATCACATTTTCAGATAAGAAATCTTATTATCGTCACCGAAAGAATGTCCACAAATCTACTGTTCAAATGTGCAAAATATGTGGCAAACCGCTAAGTTCAACTTTGGAACTATATGAGCACTTGAAAGCCGCTCATGCAAGGGAACTACTGGGTTATAATGCTAACCAAGGCTCCAGTAAATCACAAGAAGTATCACAAGAGATTGAACCCGATTATGAAAATGATCAGGAGTCTCTCGACCCCAGCGTCGATTACCAAGCGCGCTACCCGTGCGATACTTGTGGCAAACAATTTGTGGGTTTGCTAGCGTTGCAAAACCACCAGTGTATTAATCAGATACAATCACAACCACAGACGTTTGACTGCGAAATTTGTCACAAGAGCTACACTTCAATATCTGCGCTAAAAAGCCATCGTGGGTGGCATTTACGTTCACCCGATGGAAAAGCAGCCGCCAACAATTCTGGCCTATGGATGCCCCAGCACAAAGTTACTAGCAAGATAAGCAAACATGAGGTCATCGACCCGTCACAACTTGCTAAGGTCACACATACCCCCACTCCCCCTCCAGTCACTGCTACCGCAGCGAAAAGAAGACTACCACCAGAGGTCGAAGTGACAGTCGTAAATCCAAACAAGAAACTGCGCTCAGACGACTCTGTCGACCTGGATATGCAAAGTACTGGTGCAATCGAGGATAGGTACTGTACGATTTGCGACAAGGAATTTACAAAACGCGCGGCGTATCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTGTTTTGCCCGGTCTGTGATAAGAGTTTTACAAGGAAATCCACATTGCTCATTCACATGAAGAAACACTACGAGAGCGGTGAGGGTAGTTCCTCTGCTACAGGTCAAGGAGACGATGATTATTCCTGTGATTTGTGTGGCGCTCAGTATGACAATGATCAGGCGTTGCGGGCGCACCGAGCGCGGCACCATGGAGAAGATGAAGAATCGGCGGAAGAGAGTGACGACGGAAATGTTCCTATTGCTCCTCCCGGCGAGTTCACCTGTGGGCAATGCGGCGACGGCGTGGCTACACCAAGAGACCTCATCGCCCATCGCACAATGCACGCTACTCCCACCAAATTCTTCTGTAACATATGCAAGGTATACTTCGCTCGGGCGCTCGACCTCTCCTCACACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGGTTTTACATGAACAAGAAGAGTTTACAGCGGCACATTGAGATGGCGCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWQVFKNVCERTQNKLLSLKDGSQLEEVKIKSEPLSDGAYDDGVVIDGSYPVIENAGFSNKIQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDVLQHSDHDSGTEAELQPEIDDDYVDCKSGYICKNKKVISKVPKLSTSVNNARVKEAFQLRKRKSEVRKHCSRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSFTESTSVSEIKTLIGILYLHGIMRPTHQKCSDLWNSECGVPCVRNVMKYERFKFLLQNMSFDKEDDNSIIQFDIMKRMRKVFEIFAMNCRTSHEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKLVQHLAGTGRSIVMDSWFTSSSLMDSLKNEYQLYSIAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSVNGAESENNEEDEEEMNEPAQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFFNKNTPTKIMPINKVITPQKPIPIKTSKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPQQGDEEVDEEMQNNQGQNYDTVDMDSENEIEIARQHGIEHEGEEIVDGEENIDHDDDNNMEGAQSDNEKDGNDDTAESQENMEEEDSVDIKPEDQMKDDEGQEEVEHEELEINHNENEEEDDDDLPISLAPVVEISEGLQADSFNSEVNEDDEELDETVDNNETIEDEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCSEKFGNMQDFNDHALAIHAGSFDQSDNQNKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATDLNKHIYMEHSDRTLGMAPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAATESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPAPGKEGFAPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFINFTNFPPNNAQQTPSQDTMPYACDLCSKRFPLRTSLWKHKRAKHGILNPSASSSNDTSTPSAAGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQEVSQEIEPDYENDQESLDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTPTPPPVTATAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQSTGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -