Xare014272.2
Basic Information
- Insect
- Xylocampa areola
- Gene Symbol
- Zfa
- Assembly
- GCA_935412865.1
- Location
- CAKXYQ010000510.1:193032-201744[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0049 0.38 11.7 1.0 3 23 742 763 741 763 0.96 2 23 0.21 17 6.6 0.3 1 22 1152 1173 1152 1173 0.95 3 23 7.7 6e+02 1.7 0.4 1 22 1215 1236 1215 1238 0.82 4 23 0.017 1.3 10.1 4.8 2 22 1248 1268 1247 1268 0.93 5 23 1.4 1.1e+02 4.0 0.1 2 23 1276 1298 1275 1298 0.89 6 23 0.018 1.4 10.0 0.2 3 23 1319 1340 1317 1340 0.96 7 23 0.0038 0.3 12.1 3.5 1 23 1346 1369 1346 1369 0.95 8 23 0.13 10 7.3 0.0 1 23 1395 1418 1395 1418 0.90 9 23 0.019 1.5 9.9 3.4 1 23 1423 1445 1423 1445 0.97 10 23 0.0088 0.69 10.9 0.2 1 23 1451 1474 1451 1474 0.95 11 23 0.0024 0.18 12.7 1.3 1 23 1487 1509 1487 1509 0.97 12 23 0.00018 0.014 16.2 1.8 1 23 1559 1582 1559 1582 0.97 13 23 0.0032 0.25 12.3 1.8 1 23 1643 1666 1643 1666 0.96 14 23 0.0024 0.19 12.7 2.1 2 23 1693 1715 1692 1715 0.95 15 23 0.089 6.9 7.8 0.1 2 23 1721 1743 1720 1743 0.93 16 23 0.01 0.79 10.8 0.2 1 21 1787 1807 1787 1808 0.95 17 23 0.00043 0.033 15.1 1.0 1 23 1818 1840 1818 1840 0.93 18 23 0.00011 0.0089 16.9 0.3 2 23 1935 1957 1935 1957 0.93 19 23 4e-07 3.1e-05 24.6 1.4 3 23 1964 1984 1963 1984 0.98 20 23 0.041 3.2 8.8 0.4 1 23 2003 2025 2003 2026 0.95 21 23 0.19 15 6.8 0.0 1 23 2049 2071 2049 2071 0.97 22 23 0.05 3.9 8.6 0.3 1 23 2077 2100 2077 2100 0.93 23 23 0.00026 0.02 15.8 0.4 1 23 2108 2131 2108 2131 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGATCCTCCCGTTCTCGCTTCGAAAATCAAGGATTGTGTGTCTGTACAGATAAACGAAAATGACGACCTGCCCACAAATGTTTGCAGGAAATGCATGGACAATGTCAATAATTGGCATATATTTAAAAATGTATGTGAAAGGACACAAAACAAACTACTGTCTCTAAAAGATGGCAGCCAACTAGAAGAGGTGAAGATAAAAAGTGAACCATTATCAGATGAAGCTTATGATGATGGAGTGGCCATTGATGGTTCATATCCTGTCATTGAGAATGTTGGCTTGTCAAACAAAGTTCAGCCTGAAGGTCCCCCGATCTTGGCTTCATTGGGCCTCACACCAAGGAGTGATAAGAAATGTGTGGATCCTCGAATGGATTGGCATCGGGTCCATGCAATTTTGGATATGGTTCAAGACAATGAGGTGATTGATTCTCTACAGACAAAAGAAGAGAGTGATGTTTTGCACCATTCTGATCATGATTCTGACACGGAGACTGAACTCCTACCAGAAGTTGATGACAACTTCATTAATTGCCATAGTGGCTACATATGCAGAAATAAAAAGGTTATATCAAAAATTCCTAAACTATCGCCTTCCATTAATAGGGCAAGGATCCAAGAGGTACTCAAACTTAGGAAACGGAAATCTGATCTTCCTAAAAATGTTTTACGACCTAAAAATGCGTGGCAGTTGTTATTCACTGATGACCTACTAGAATTAATTGTGGCTTCTACTAATGAAAGTATTGTCACAAATGGGAAGGATTTCTCGAAGACGACTAGCGTCAGCGAAATTAAAACGCTTATTGGTATTCTGTATTTAAATAGCATAATGCGACCGACACATCAGAAATGTAGTGACCTTTGGAATGGTGACTGCGGTGTACCTTGCATAAGAAATGTCATGAAATATGAAAGGTTCAAATTCTTGCTTCAAAACATCAGTTTCGATAAAGAGGACGACGACAGCATTGTACAGTTCGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACATCTCACGAGATCGAGAATATTGCGGTTATTGATGAGATCATTGTGCCAGTTTACGGACCTTGCCCATTTCGATATGATATTGATAAGAAACCACTGAAGCGGGGCATAAAGATGGTGCTGCTTGTTGATTCATCTACATTCTACATCAGTAATTTAGATGTCATTACTGATCCATATTTTGGCGCTGAATACATTACAAAGAAGTTGGTTTCTCATTTAGCTGGAACTGGTAGATCGATTGTTATGGATAGTTGGTATACATCTTATTCATTAATGGAAAGCCTTAGGAATGAATACCAGTTGTTTTCCATTGCAGCCTTGAACCCAAAGAGCGATCTGATTCCACCACTATTTCTGTCTTCATATAGGAAATGTCGAACATTTATGTCTGGATTTATTGATCATGAAGTATCCATTACTTCTTATGTCAATACTGAGGGGAAATCCATGAATGTGATGACTAATGAACCTCGATATTACAGGAAAGGTCATATAAATCACACCACAGTTGTATCTGTGTATAAGAAGAATCAGTCTGCGGTAGAAGTAGTTGATGTTCTCATGAATTACTATACTACAATGCAGCATACAAATGATTGGGCATTATCTTTATTCTTTACAATGTTAAACATTGCATCCATCAATTCTCAGGTGTTGTGGTGCTCTCAAAATCCGAATGCAATGCAGCGTCGTTTATTCATCAAAGATTTGGCATTAAGTTTAATGGAACATGACGAGGAAAAGATTGCAATATCACCAATACAAGACATAGAGGAAAGGAAGAAAAAATATTCTCTAGTGCAGAACATGCACCCATATTATAAGAATAGAAGGCGATGTAGAATATGCGTAAAAACAACAAAACGCGATAGGAGAACTAAACAGTTCTGTGTCAAATGTGGTCTATTTATATGTAAAGAGCATTCTGGAGCAGAGAGTGAAAATAATGAAGAAGACGAGGAAGAAACAAATGAGCCCACACAGACATTTACGAAAATGCCCCATATGCCGGAGGTATCCATCACGGTGATGAGGCCCACGGGTGAAACTCTTCACGCCCGTCAAGGGATACACCAACTTGCCTCCAAGGACTGTCTCGTGTGCGGACGCTCGTACAGGTACTCACACAACGCTCGCCGACATGAACTCACTGCTCACAGCTTCGACAGATATACAAATAAAATTACACCCAAAAAAACTCTCACACACTTACAACCCAAACTCAGACCTAACCCATTCAATCCCAAAGCACGGATGATGCCGAATCCTATTAGCCATAAGATGCAATTCATGAACAAGAACATGTCAGCAAAAATAATGCCTATGAACAAAGTTATAACGCCACAAAAACCCATTCCAATTAAGACGTCTAAGGCACAACAAAATAATTTACCGTACCCTCTTCGCATTAAAGCGCTTAAGGATTTACAAATTAAGAAAAAGGAACCTCAAATTCTAAAGACTTTGTTAACCTCTAAACCTGAGGTTTTGGTATCAGAACCCGAAATACTAAATTCTGGTCCTGAAAGTCCAGAAACATTAATATCTGAGCCTGAAATTGCATCTTTTCAAGTCGAAGCCATTCTTACGGAACCCGATGCCGATGCCTACGATCCTCAGCAAGGTGACGAAGAAGTCGATGAAGAAATTCAAAACAATTCGAGTCAGAACTATGACACAGTTGACATGGACTCAGAGAACGAAATTGAGATTGCTCGCCAACAAAACATTGAAAACGAAGTCGATGAAAATGCTGATGGGGAAGAGAATGCCGACCAGTGTGATGATGAAAACAATATGGAAGGCGGTCAAAGTGACAACGAAAAAGATGGTAATGACGACACCGCTGAAAGTCAAGAAAACATGGAGGAAGATGATAGTGTTGATATTAAAGCCGAGGGTGAAATGAAGGATGAGGAGGGTCAGGAGGGCCAGGAAGGCCTGGAAGAGAGAGACCAAGAGGAATCTGAAATTAATCATAACGAAAACGAAGAAGAGGACGATGACGACCTCCCAATATCACTAGCTCCTGTCGTGGAAATAAATGAGGGTTTGCAAGGAAACACGTTTAACCCTGAAGTTCCTGAAGAAGAAGAACTTGATGAAACTGCCGATACCAATGAAACCGTTGACGAAGAAGAGGTCAAAGAACTCGACCCTGACAAAACATATGTTACTAAAACCCAAAGAGACTTTATCCATAAATATCGTGACATCATTCAGCAAATTAATACTAAACGTTGTTTATGTTGCGACCGGGAACATCCGCGCAGAAAAGCTGTCATACAGCACTTACAAAAAAACGGACACAAAGTCCCCAAACACACTTGCTACAATTGTGTTATTACATTCGGACATATTGGCGCTCTACTGAGCCACATGAGGTCGAATTCTTGCACTAATTTGTGGAAGATCATCTACAATGAAAATGGCATTACAGATGACTTGGTTCTGGAAGATGAGCCTAAAGAGGTCAAGGTTCAATATAAAGATATTTTCAATGCTAGGTCTTATGCATGCAAACTCTGCCCAGCTAAGTTCCAACTGAAACAGTTTATAATGAAACACGTTTTGGACACGCATGAGGATGGTCAATCCAGAGTCCCGCTCTGTTGTGTCCACTGCCGATCTAGATTTAAAGATAAAAGTTTGCTGAAGAAACACATTCGTAAAGGGGAATGTACAGTTTATATTTCTTGCGATTTGTGCACAGAAAAGTTTGGAAATATGCAGGACTTCAATGACCATGCTTTAGGTGTCCATGCTGGCAGTTTTGACCAGTCAGATAATCAGAGCAAATGTGTTGACGGTCGACCAACCGACTGTCCCTTGTGTGGAAAGAAAAACAGCAGCTATCCGAATTTAGTTAAACATTTAAAGATTATACACAGCGAGGAAAAACCTCATTACTGCCAGCATTGCGATTCTAAATTCGAGCAAGCTACTGATTTGAACAAACACATTTACATGGAACATTCTGACAGAACATTAGGCATGTCGACCACTGAACCAGATATGTCCATCGTGAAAGAAGAAGCAGAAGAGTATCATTACTCTTGTACGGAATGTAATGCCATATTTGAAACTGTTGACGCGTGGACTGATCACCAAGTGGCCGAACATAACCAAGTGGCCCACCACTGCGACCAGTGTGAAAAGAAATTCCTTCGGCCTTCTGAGCTTGCGGAGCATAAGAACACTCACTTGCGGGTTAAATTTTACCCGTGTAGTGTATGCCCCAACTCCTACAGCACTCCACAGAAATTATCTGAGCATGTGCAGCAGTCTCATCCTGGTATTGGTGCTGCTGCGGCCGCTGAAACGGAATTCTTCTGCGACATCTGCATCAGGTCATTCAAAAGTCGCCAAGCGTACTCGAACCATATGCGGATTCACGCTAAAATTCCTACTACGAACAGGAAACCAACTATAATTAAAGAAGGATTTGCACCTCAAATTATTGGAAAACCTATCAAGCAATATCCCGTTGTTCAACCTGGTTTTGTCTCATTCAAACCAAACTATAACATCCCTAACGCCCCTTATTCATGTGATATTTGTGGCAAAGGATTCATGCACAAGAAGAATATATGGAAACACAAGAAGGTTTTGCATGCTGACATTCTAGTTGATAGACATGACAGTGAAGAGAATACTATGCAAGCTTCCACAGAAGAGGAAGAGTTTAATCCTGACGAAAACGGTGCTATTCTCTCTACGCCGCAATTTAACAGTTTTAACTTCACGAACTTTACCAATAATGTGGCACAACAAACGCCACTGGAAACTATGCCTTACTCGTGTGAATTATGCTTCAAACGGTTCCCGCTTAAGACCAGTTTGTGGAAACACAAACGAGCTAAGCACGGAATTGTGAACCCTAGCACTAGCGGTAGCATCGACACGTCCACACCATCAGCTAGTGGTGAAGGCAGTAGTAGATCAAGTTGCACTATATGCCGAATCACGTTCTCAGACAAGAAATCTTACTATCGCCACCGAAAAAATGTCCACAAATCAACAGTTCAAATGTGTAAAATATGTGGCAAGCCCTTAAATTCTACATTGGAGTTATACGAACACTTGAAGGCCGCTCACGCAAGGGAATTACTGGGCTATAATGCTAATCAAGGCTCTAGTAAATCCCAAGATATGTCTCAAGACATGGACCCCGATTACGAAAACGATCAGGAGTCGATCGATCCTAGTGTAGATTATCAAGCACGATACCCGTGCGATACTTGTGGCAAACAGTTTGTTGGTTTATTAGCGTTGCAGAACCACCAGTGCATCAATCAGATACCATCACAACCACAGACTTTTGACTGCGAGATTTGTCACAAGAGTTACACCTCAATATCTGCACTAAAAAGTCATCGTGGCTGGCATTTGCGATCGCCTGACGGAAAAGCAGCGGCAAATAATTCTGGCCTTTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGTAAACATGAAGTCGTAGACCCGTCGCAACTTGCTAAGGTCACACATACTCCCGTTGTTCCTCCCCCTGCGACTACCGCTACTATAGCTAAAAGAAGACTACCGCCAGAGGTCGAAGTGACAGTTGTTAATCCTAATAAGAAAATGCGCTCGGACGATTCGGTTGACTTGGATGCGCAAAATGCTGGTTCAATCGAAGATAGGTACTGCACGATTTGCGACAAAGAATTTACAAAGCGAGCGGCGTATCAACGCCACATGGATGAAGTGCATCAACCAAACTCTGTGTTTTGTCCGGTCTGTGATAAGAGTTTTACAAGAAAGTCCACACTTCTCATCCACATGAAGAAGCACTACGAGAGCGGTGAAGGTAGTTCATCTGCTACTGGTCAAGGAGATGATGATATGTTCTCTTGTGATTTGTGCGGCGCTCAGTATGACAGCGATCAAGCGTTGAGGGCGCATCGAGCGCGACACCACGGAGAAGATGAGTCAGCAGAGGAGGAGAGTGACGACGGCAATGTTCCTATTGCTCCTCCCGGAGAATTCACTTGTGCGCAATGTGGTGATGGCGTCGCCACTCCTCGAGATCTCATCGCCCATCGCACGATGCATGCTACTCCCACCAAATTTTTGTGTAATATATGCAAAGTGTACTTCGCTCGGGCGCTGGACCTGTCCTCGCACACTCGTGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGATTTTACATGAACAAGAAGAGTTTACAGCGACATATCGAGATGGCTCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSDPPVLASKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHIFKNVCERTQNKLLSLKDGSQLEEVKIKSEPLSDEAYDDGVAIDGSYPVIENVGLSNKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEESDVLHHSDHDSDTETELLPEVDDNFINCHSGYICRNKKVISKIPKLSPSINRARIQEVLKLRKRKSDLPKNVLRPKNAWQLLFTDDLLELIVASTNESIVTNGKDFSKTTSVSEIKTLIGILYLNSIMRPTHQKCSDLWNGDCGVPCIRNVMKYERFKFLLQNISFDKEDDDSIVQFDIMKRMRKVFEIFAMNCRTSHEIENIAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYISNLDVITDPYFGAEYITKKLVSHLAGTGRSIVMDSWYTSYSLMESLRNEYQLFSIAALNPKSDLIPPLFLSSYRKCRTFMSGFIDHEVSITSYVNTEGKSMNVMTNEPRYYRKGHINHTTVVSVYKKNQSAVEVVDVLMNYYTTMQHTNDWALSLFFTMLNIASINSQVLWCSQNPNAMQRRLFIKDLALSLMEHDEEKIAISPIQDIEERKKKYSLVQNMHPYYKNRRRCRICVKTTKRDRRTKQFCVKCGLFICKEHSGAESENNEEDEEETNEPTQTFTKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLTHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMSAKIMPMNKVITPQKPIPIKTSKAQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDPQQGDEEVDEEIQNNSSQNYDTVDMDSENEIEIARQQNIENEVDENADGEENADQCDDENNMEGGQSDNEKDGNDDTAESQENMEEDDSVDIKAEGEMKDEEGQEGQEGLEERDQEESEINHNENEEEDDDDLPISLAPVVEINEGLQGNTFNPEVPEEEELDETADTNETVDEEEVKELDPDKTYVTKTQRDFIHKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGECTVYISCDLCTEKFGNMQDFNDHALGVHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQATDLNKHIYMEHSDRTLGMSTTEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAAAAAETEFFCDICIRSFKSRQAYSNHMRIHAKIPTTNRKPTIIKEGFAPQIIGKPIKQYPVVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAILSTPQFNSFNFTNFTNNVAQQTPLETMPYSCELCFKRFPLKTSLWKHKRAKHGIVNPSTSGSIDTSTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQDMSQDMDPDYENDQESIDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDPSQLAKVTHTPVVPPPATTATIAKRRLPPEVEVTVVNPNKKMRSDDSVDLDAQNAGSIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDMFSCDLCGAQYDSDQALRAHRARHHGEDESAEEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFLCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00017541;
- 90% Identity
- -
- 80% Identity
- -