Basic Information

Insect: Abrostola tripartita
Gene Symbol: -
Assembly: GCA_905340225.1
Location: HG996491.1:10523656-10532869[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0045 0.33 11.8 1.0 3 23 652 673 651 673 0.96

2 23 0.19 14 6.7 0.3 1 22 1059 1080 1059 1080 0.95

3 23 7 5.1e+02 1.8 0.4 1 22 1122 1143 1122 1145 0.82

4 23 0.0033 0.24 12.2 4.0 2 22 1155 1175 1154 1175 0.93

5 23 1 74 4.4 0.0 3 23 1184 1205 1182 1205 0.89

6 23 0.016 1.2 10.0 0.2 3 23 1226 1247 1224 1247 0.96

7 23 0.0035 0.26 12.2 3.5 1 23 1253 1276 1253 1276 0.95

8 23 0.12 8.6 7.4 0.0 1 23 1302 1325 1302 1325 0.90

9 23 0.0051 0.38 11.6 3.5 1 23 1330 1352 1330 1352 0.97

10 23 0.0081 0.59 11.0 0.2 1 23 1358 1381 1358 1381 0.95

11 23 0.0022 0.16 12.8 1.3 1 23 1394 1416 1394 1416 0.97

12 23 0.00017 0.012 16.3 1.8 1 23 1466 1489 1466 1489 0.97

13 23 0.0045 0.33 11.8 1.7 1 23 1549 1572 1549 1572 0.96

14 23 0.0022 0.16 12.8 2.1 2 23 1598 1620 1597 1620 0.95

15 23 0.081 6 7.9 0.1 2 23 1626 1648 1625 1648 0.93

16 23 0.0093 0.68 10.8 0.2 1 21 1692 1712 1692 1713 0.95

17 23 0.00039 0.029 15.1 1.0 1 23 1723 1745 1723 1745 0.93

18 23 0.0001 0.0077 16.9 0.3 2 23 1838 1860 1838 1860 0.93

19 23 3.7e-07 2.7e-05 24.7 1.4 3 23 1867 1887 1866 1887 0.98

20 23 0.021 1.5 9.7 0.3 1 23 1906 1928 1906 1929 0.95

21 23 0.17 13 6.8 0.0 1 23 1950 1972 1950 1972 0.97

22 23 0.026 1.9 9.4 0.6 1 23 1978 2001 1978 2001 0.95

23 23 0.00024 0.017 15.8 0.4 1 23 2009 2032 2009 2032 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0045	0.33	11.8	1.0	3	23	652	673	651	673	0.96
2	23	0.19	14	6.7	0.3	1	22	1059	1080	1059	1080	0.95
3	23	7	5.1e+02	1.8	0.4	1	22	1122	1143	1122	1145	0.82
4	23	0.0033	0.24	12.2	4.0	2	22	1155	1175	1154	1175	0.93
5	23	1	74	4.4	0.0	3	23	1184	1205	1182	1205	0.89
6	23	0.016	1.2	10.0	0.2	3	23	1226	1247	1224	1247	0.96
7	23	0.0035	0.26	12.2	3.5	1	23	1253	1276	1253	1276	0.95
8	23	0.12	8.6	7.4	0.0	1	23	1302	1325	1302	1325	0.90
9	23	0.0051	0.38	11.6	3.5	1	23	1330	1352	1330	1352	0.97
10	23	0.0081	0.59	11.0	0.2	1	23	1358	1381	1358	1381	0.95
11	23	0.0022	0.16	12.8	1.3	1	23	1394	1416	1394	1416	0.97
12	23	0.00017	0.012	16.3	1.8	1	23	1466	1489	1466	1489	0.97
13	23	0.0045	0.33	11.8	1.7	1	23	1549	1572	1549	1572	0.96
14	23	0.0022	0.16	12.8	2.1	2	23	1598	1620	1597	1620	0.95
15	23	0.081	6	7.9	0.1	2	23	1626	1648	1625	1648	0.93
16	23	0.0093	0.68	10.8	0.2	1	21	1692	1712	1692	1713	0.95
17	23	0.00039	0.029	15.1	1.0	1	23	1723	1745	1723	1745	0.93
18	23	0.0001	0.0077	16.9	0.3	2	23	1838	1860	1838	1860	0.93
19	23	3.7e-07	2.7e-05	24.7	1.4	3	23	1867	1887	1866	1887	0.98
20	23	0.021	1.5	9.7	0.3	1	23	1906	1928	1906	1929	0.95
21	23	0.17	13	6.8	0.0	1	23	1950	1972	1950	1972	0.97
22	23	0.026	1.9	9.4	0.6	1	23	1978	2001	1978	2001	0.95
23	23	0.00024	0.017	15.8	0.4	1	23	2009	2032	2009	2032	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGAGTGACTCGGAACCTCCCGTCCTCGCTTCGAAAATCAAGGATTGTGTGTCTGTTCAGATAAACGAAAATGACGACCTGCCTACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATGTATTTAAAAATGTATGTGAAAGGACACAAAACAAACTACAGTCTCTAAAACATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAACCACTATCTGATGAGGCTTATGATGATGGAGTGGTTATTGATGGCTCATATCCTGACATTGAGAATGCTGGCTTGTCAAACAAAGTGCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACGCCAAGGAGTGATAAGAAATGTGTGGATCCTCGAATGGATTGGCATCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGATTCTCTACAGACAAAGGAAGAGTGTGATGTTTTGCAGCAGTCTGACCATGATTCTGACACAGAGGCTGAACTCCAACCAGACATTGATGATGATTATGTTGATTGCAAAAATGGCTACATATGCAAAAATAACAAAGTAATATCCAAAAATCCGAAACTTTCAACATCTGTAAATAATGCTAGAATAAAAGAAGCTTTTAAGATGAGGAAACGCAAATCCGATTTTCGTAAACATTGCCCACGCCCTAAAAATGCGTGGCAGATGTTATTCACTGATGACCTACTAGAGTTGATTGTCGCTTCTACTAATGAAAATATTGTGACGAATGGGAGAGGTTTGTCGGAGTCAACCGGCGTCAGCGAAATTAAAACGCTTATCGGTATTCTATATTTGCACGGCATTATGCGGCCTACACATCAGAAATGTAGTGACCTTTGGAACAGCGAATGTGGTGTACCTTGTATTAAAAACGTTATGAAATACGAAAGGTTCAAATTCTTACTTCAAAACATCAGTTTCGATAAAGAGGACGACGACAGCATTATTCAGTTTGACATAATGAAGCGTATGCGTAAAGTATTCGAGATCTTCGCCATGAATTGTAGAACGTCTCACGAGATCGAGAATATTGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATATGATATTGATAAGAAGCCGCTGAAACGGGGTATTAAAATGGTATTACTTGTTGATTCATCCACATTCTATATGAGCAATTTAGATGTCATTACAGATCCATACTTTGGCGCCGAAGAGATAACGAAAAAAGTGGTCCAACACTTAGCGGGCACTGGGAGAACTATTGTTATGGACAGTTGGTATACATCTTCTACATTGATTGAAAGCCTAAGAAATGAGTATCAATTGTTTTCTGTTGCAGCTTTGAATCCGAACAGTGATATGATTCCACCTTTATTTCTATCACAATATAGAAAATGTCGGACATTCATGTCTGGTTTTATTGACCATGAAGTTTCAATCACATCATATGTCAATAACGAAGGGAAGGCAGTAAATGTATTAACTAATGAGCCCAGATATTACAGAAAAGGCCATATCAACCACACAACAGTTGTATCCATGTATAAGAAGAATCAGTCTGCTGTGGAAGTGGTTGATGTTCTGATGAATTACTACACCACAATGCAGCATACTAATGATTGGACACTGTCTTTATTCTTTACACTGTTAAATATTGCTTCTGTTAATGCTCAGGGAGCGGAAAGTGAGAATAATGAAGAAGATGAAGACGAGGAAGAAAATAATGAACCGGCTCAAACATTCCCTAAAATGCCCCACATGCCGGAGGTGTCAATCACGGTCATGAGGCCCACGGGTGAAACCCTTCACGCTAGACAAGGCATACATCAACTCGCTTCCAAAGACTGCCTTGTCTGTGGCCGCTCCTACAGGTACTCACACAACGCCCGCCGACATGAACTCACTGCTCACAGCTTCGACAGATATACAAACAAAATAACACCCAAGAAAACTCTCACTCACCTGCAACCAAAACTCAGACCCAACCCGTTTAATCCTAAAGCGCGGATGATGCCGAATCCTATCAGTCAAAGGATGCAATTTATGAACAAAAACATCCCTGCTAAAATTATGCCAATAAACAAAGTAATTACGCCACAGAAACCCATTCCAATTAAGTCATCAAAGACGACTCAAAATAATTTACCATATCCTCTTCGCATTAAGGCGCTTAAAGATTTACAAATAAAAAAAAAGGAGCCTCAGATACTTAAGACTTTATTAACTTCTAAACCTGAAGTTCTAGTCTCAGAACCTGAGATATTAAATTCTGGTCCTGAAAGCCCAGAAACTTTGATATCTGAGCCTGAAATTGCGTCTTTTCAAGTGGAAGCGATTCTTTCCGAGCCGGATGCCGATGCATACGACCCTCAGCCAGGTGACGAAGATGGCGACGGTGAAATACGCGACAATCAGAATCAAAACTATGACACAGTGGACATGGACTCTGACAACGAAATTGAAATTGCTCGTCAGCAAGGTATTGAACAAGACGGCGAGGAAAACGCTGAAGGGGAAGATAATATGGAACCATGCGATGACGACAATAATATGGAAGGCGCCATGAGCGACAACGAAAAAGACGGTATGGATGATACAGCTGAAAGTCAAGAAAACATAGAAGGCGATAATGGCATTGACATCAAAGCCGAGACTAATATGAAGGATAGTGACGAAGGCCACGAGGAAAGAGATCACGAAGAAAATGAGATGAATCATGATGAACAAGACGAAGAAGACGATGATGATCTTCCGATATCTTTGGCGCCAGTCGTTGAAATAAATGAAGATATGCAAACGAACTTGTTTAATAATGAAATGCAAGAAGAAGAAGAGGAACTTGATGAAACTGCCGATACAAATGAAACCATTGACGAAGAGGAACAGGTCAAAGAACTTGACCCCGACAAAACATACGTTACTAAAACCCAAAGAGACTTTATTCATAAATATCGCGACATCATTGAGCAAATTAATACAAAGCGTTGCCTATGTTGTGACCGCGAACACCCGCGCAGAAAAGCGGTTATACAACACTTACAAAAAAATGGGCATAAGGTCCCAAAACACACATGTTATAACTGTGTCATCACATTCGGACATATTGGCGCTCTCCTTAGTCATATGAGATCAAATTCTTGTACTCATTTATGGAAGATTATTTACAATGAAAATGGCATAACAGATGACTTGGTCCTAGAAGATGAGCCAAAAGAGGTCAAGGTTCAATATAAAGATATTTTTAATGCTAGATCTTATGCATGTAAACTGTGTCCCGCAAAGTTTCAACTAAAACAGTTTATAATGAAGCATGTTTTAGATACACATGAAGACGGACAATCAAGGATGCCTCTTTGTTGTGTGCACTGCCGTGCTAGGTTCAAAGATAAAAGTTTATTGAAGAAACACATTCGTAAAGGTGAATGTACTGTTTATATTGCATGTGATTTGTGCCCAGAAAAGTTTGGAAATATGCAGGACTTCAACGACCACGCATTAGCTGTCCATGCTGGCAGTTTCGATCAGTCGGATAATCAAAGCAAATGTGTTGACGGTCGCCCCACCGACTGTCCGCTGTGTGGTAAGAAAAACAGCAGCTATCCGAACTTAGTGAAACATTTGAAGATTATACATAGTGAGGAGAAACCACATTACTGCCAACATTGCGACTCTAAATTCGAACAAGCTACTGATCTTAACAAGCACATTTACATGGAACATTCTGACAGAACGTTAGGTATGTCTACCACAGAACCAGATATGTCGATTGTAAAGGAAGAAGCAGAAGAATACCATTACTCGTGTACGGAATGTAATGCCATATTTGAAACTGTCGACGCATGGACTGATCACCAAGTGGCTGAGCATAACCAAGTGGCGCACCACTGCGACCAGTGTGACAAGAAATTCTTACGTCCTTCTGAGCTTGCAGAACACAAGAACACACACTTGAGGGTGAAGTTCTATCCGTGTAGCGTATGCCCTAACTCGTACAGCACGCCGCAAAAGCTGTCGGAACACGTGCAACAGTCTCATCCCGGAGTCGGCGCCGTTGCAGCGGGGGATACGGAATTTTTCTGCGACATTTGCATCAGGTCGTTCAAAAGTCGTCAAGCTTATTCAAATCATATGCGTATTCACGCCAAAGTACCGACTACTAACAGGAAACCAGGCGACATTAAAGGTGGATTTGCGCCACAAATTATTGGAAAACCTATCAAGCAATACCCCGTGGTGCAACCTGGCTTTGTCTCTTTTAAACCAAACTACAATATTCCCAACGCTCCATATTCATGTGACATATGTGGCAAAGGTTTTATGCACAAGAAAAATATATGGAAGCACAAGAAGGTATTGCATGCTGACATTTTAGTTGACAGACACGACAGTGAAGAGAATACCATGCATGCTTCTACAGAAGAAGAAGAATTTAATCCCGACGAAAATGGCGCCGTTCTATCTACGCCACAATTCAATAGCTTTAACTTTACGAATTTCCCGAACAATGTACAACAAACGCCACAAGAAACAATGCCTTACTCTTGTGAATTATGTTTCAAACGGTTCCCACTGAGGACGAGTTTATGGAAACACAAACGCGCCAAACATGGAATTGTTAACCCTAGCACCAGCGGTGGTAGTGACACGCCGACGCAAGCAGCGAGTGGTGAGAGTAGTAGATCTAGTTGCACTATTTGCAGAATCACATTTTCAGACAAGAAATCCTACTATCGCCATCGAAAGAATGTCCACAAATCGACCGTTCAAATGTGCAAAATTTGTGGTAAACCTCTAAATTCTACATTAGAATTATACGAGCACTTGAAGGCAGCTCACGCAAGGGAGTTATTGGGATATAATGCTAACCAAGGCTCGAGTAAATCTCAAGATATTGCACAAGAAATAGAACCCGATTATGAGAATGATCAAGAGTCTGTTGACCCCAGCGTCGATTATCAAGCGCGATACCCTTGCGATACTTGTGGCAAACAATTTGTTGGCTTACTTGCATTGCAAAATCACCAGTGCATTAATCAATTGCCTTCACAACCACAGACTTTTGATTGTGAGATTTGTCACAAGAGTTATACTTCGATATCTGCGTTAAAAAGTCATCGTGGGTGGCATTTGCGTTCACCTGATGGAAAGGCAGCCGCGAATAATTCAGGGCTTTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGCAAACATGAAGTTGTTGATCCGGTACAACTTGCTAAGGTCACCCACACTCCTGTTCCCGCCCCGACACCACCTGCTACGGTAGCAAAGCGGAGACTACCGCCGGAGGTCGAAGTGACAGTAGTTAACCCAAACAAAAAGTTGCGTTCCGATGATTCAGTCGAATTAGACCAAAGTTCAGGCGCCGTGGAGGATAGATACTGTACTATTTGTGACAAAGAATTTACGAAACGAGCGGCCTATCAGCGGCACATGGACGAGGTTCATCAACCGAATTCTGTGTTTTGTCCGGTCTGTGATAAGAGTTTCACAAGGAAGTCAACATTGCTCATTCATATGAAAAAGCACTACGAAAGTGGTGAAGGTAGTTCCTCCGCTACCGGTCAAGGTGAGGACGAGATGTACTCATGTGATTTATGCGGAGCTCAGTATGACAATGACCAGGCGCTGCGGGCTCATCGAGCGAGGCACCACGGTGAAGAGTCAGGTGATGAAAGTGACGATGGAAATGTGCCCGTGGCTCCTCCCGGAGAATTCACATGCGCACAATGTGGAGATGGTGTAGCGACCCCAAGAGACCTGATTGCACATCGCACTATGCACGCTACTCCCACCAAATTTTTCTGTAACATATGCAAAGTGTACTTCGCACGGGCGCTGGACCTCTCCTCGCACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCTTGTGCCATGTGCGATCGATTTTACATGAACAAAAAGAGTTTACAGCGGCACATCGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSSDSEPPVLASKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLQSLKHGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPDIENAGLSNKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDVLQQSDHDSDTEAELQPDIDDDYVDCKNGYICKNNKVISKNPKLSTSVNNARIKEAFKMRKRKSDFRKHCPRPKNAWQMLFTDDLLELIVASTNENIVTNGRGLSESTGVSEIKTLIGILYLHGIMRPTHQKCSDLWNSECGVPCIKNVMKYERFKFLLQNISFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHEIENIAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKVVQHLAGTGRTIVMDSWYTSSTLIESLRNEYQLFSVAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSITSYVNNEGKAVNVLTNEPRYYRKGHINHTTVVSMYKKNQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQGAESENNEEDEDEEENNEPAQTFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLTHLQPKLRPNPFNPKARMMPNPISQRMQFMNKNIPAKIMPINKVITPQKPIPIKSSKTTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDADAYDPQPGDEDGDGEIRDNQNQNYDTVDMDSDNEIEIARQQGIEQDGEENAEGEDNMEPCDDDNNMEGAMSDNEKDGMDDTAESQENIEGDNGIDIKAETNMKDSDEGHEERDHEENEMNHDEQDEEDDDDLPISLAPVVEINEDMQTNLFNNEMQEEEEELDETADTNETIDEEEQVKELDPDKTYVTKTQRDFIHKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTHLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRMPLCCVHCRARFKDKSLLKKHIRKGECTVYIACDLCPEKFGNMQDFNDHALAVHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQATDLNKHIYMEHSDRTLGMSTTEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGVGAVAAGDTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDIKGGFAPQIIGKPIKQYPVVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMHASTEEEEFNPDENGAVLSTPQFNSFNFTNFPNNVQQTPQETMPYSCELCFKRFPLRTSLWKHKRAKHGIVNPSTSGGSDTPTQAASGESSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQDIAQEIEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDPVQLAKVTHTPVPAPTPPATVAKRRLPPEVEVTVVNPNKKLRSDDSVELDQSSGAVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGEDEMYSCDLCGAQYDNDQALRAHRARHHGEESGDESDDGNVPVAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -