Basic Information

Insect: Lycophotia porphyrea
Gene Symbol: Zfa
Assembly: GCA_950005105.1
Location: OX465390.1:13531456-13539987[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0074 0.61 11.4 1.1 3 23 699 720 698 720 0.96

2 23 0.24 20 6.6 0.3 1 22 1107 1128 1107 1128 0.95

3 23 8.5 7.1e+02 1.7 0.4 1 22 1170 1191 1170 1193 0.82

4 23 0.019 1.6 10.1 4.8 2 22 1203 1223 1202 1223 0.93

5 23 2.3 1.9e+02 3.5 0.1 3 23 1232 1253 1230 1253 0.89

6 23 0.02 1.7 10.0 0.2 3 23 1274 1295 1272 1295 0.96

7 23 0.0038 0.31 12.3 2.5 1 23 1301 1324 1301 1324 0.95

8 23 0.14 12 7.3 0.0 1 23 1350 1373 1350 1373 0.90

9 23 0.021 1.8 9.9 3.4 1 23 1378 1400 1378 1400 0.97

10 23 0.0098 0.82 11.0 0.2 1 23 1406 1429 1406 1429 0.95

11 23 0.0046 0.38 12.0 0.8 1 23 1442 1464 1442 1464 0.97

12 23 0.0002 0.017 16.3 1.8 1 23 1514 1537 1514 1537 0.97

13 23 0.0021 0.17 13.1 1.4 1 23 1597 1620 1597 1620 0.96

14 23 0.0027 0.22 12.7 2.1 2 23 1647 1669 1646 1669 0.95

15 23 0.045 3.7 8.9 0.1 2 23 1675 1697 1674 1697 0.94

16 23 0.011 0.94 10.8 0.2 1 21 1741 1761 1741 1762 0.95

17 23 0.00048 0.04 15.1 1.0 1 23 1772 1794 1772 1794 0.93

18 23 0.00013 0.011 16.9 0.3 2 23 1887 1909 1887 1909 0.93

19 23 4.5e-07 3.7e-05 24.6 1.4 3 23 1916 1936 1915 1936 0.98

20 23 0.025 2.1 9.7 0.3 1 23 1954 1976 1954 1977 0.95

21 23 0.21 18 6.8 0.0 1 23 2000 2022 2000 2022 0.97

22 23 0.031 2.6 9.4 0.6 1 23 2028 2051 2028 2051 0.95

23 23 0.00029 0.024 15.8 0.4 1 23 2059 2082 2059 2082 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0074	0.61	11.4	1.1	3	23	699	720	698	720	0.96
2	23	0.24	20	6.6	0.3	1	22	1107	1128	1107	1128	0.95
3	23	8.5	7.1e+02	1.7	0.4	1	22	1170	1191	1170	1193	0.82
4	23	0.019	1.6	10.1	4.8	2	22	1203	1223	1202	1223	0.93
5	23	2.3	1.9e+02	3.5	0.1	3	23	1232	1253	1230	1253	0.89
6	23	0.02	1.7	10.0	0.2	3	23	1274	1295	1272	1295	0.96
7	23	0.0038	0.31	12.3	2.5	1	23	1301	1324	1301	1324	0.95
8	23	0.14	12	7.3	0.0	1	23	1350	1373	1350	1373	0.90
9	23	0.021	1.8	9.9	3.4	1	23	1378	1400	1378	1400	0.97
10	23	0.0098	0.82	11.0	0.2	1	23	1406	1429	1406	1429	0.95
11	23	0.0046	0.38	12.0	0.8	1	23	1442	1464	1442	1464	0.97
12	23	0.0002	0.017	16.3	1.8	1	23	1514	1537	1514	1537	0.97
13	23	0.0021	0.17	13.1	1.4	1	23	1597	1620	1597	1620	0.96
14	23	0.0027	0.22	12.7	2.1	2	23	1647	1669	1646	1669	0.95
15	23	0.045	3.7	8.9	0.1	2	23	1675	1697	1674	1697	0.94
16	23	0.011	0.94	10.8	0.2	1	21	1741	1761	1741	1762	0.95
17	23	0.00048	0.04	15.1	1.0	1	23	1772	1794	1772	1794	0.93
18	23	0.00013	0.011	16.9	0.3	2	23	1887	1909	1887	1909	0.93
19	23	4.5e-07	3.7e-05	24.6	1.4	3	23	1916	1936	1915	1936	0.98
20	23	0.025	2.1	9.7	0.3	1	23	1954	1976	1954	1977	0.95
21	23	0.21	18	6.8	0.0	1	23	2000	2022	2000	2022	0.97
22	23	0.031	2.6	9.4	0.6	1	23	2028	2051	2028	2051	0.95
23	23	0.00029	0.024	15.8	0.4	1	23	2059	2082	2059	2082	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCTCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCTGTACAGATAAACGAAAATGACGACCTGCCCACCAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTggcatgtttttaaaaatgtatgtgaaaGGACACAAAACAAACTACTGTCTCTAAAAGATGGCAACCAACTAGAAGAGgtgaaaataaaaagtgaaCCACTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTACTCAAACAAAGTGCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGATCCACGAATGGATTGGCACCGAGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAGACAAGGGAAGAGTGTGATGTTTTGCAGCATTCTGACCATGACTCAGATACTGAAGCTGAACTCCAAACAGAAATTGACGACAGTTATGTAAATAGCAAAATTGGATATGTatgcaaaaataaacaagttatgTCAAAAGTTCCAAAACTATCAACTTCTATAAATAATGCTAGAGTGAAAGAAGCTTTCAAAATCAGGAAACGTAAATCAGAAGTCCGTAAACATTGTCCACGACCTAAAAATGCGTGGCAATTGTTATTCACTGATGACCTACTAGAGTTGATTGTTGCTTCTACTAATGACAATATTGTGACAAATGGGAAAAGTTTCACGAAGTCAACGAGCGTCAGCGAAATAAAAACGCTTATCGGTATGCTGTATCTGCACGGTATAATGCGGCCGACTCATCAGAACTGTAGTGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAATATCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATGAGCTTCGATAAAGAGGACGACAACAGCATTATACAGTTTGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACAGCTCACGATATCGAGAATGTCGCAGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGTCCATTTCGATACGATATTGATAAGAAACCGCTGAAGCGGGGCTTAAAGATGGTATTGCTAGTTGATTCATCCACATTCTATATGAGCAATTTAGACGTCATCACTGACCCTTACTTCGGAGCAGAGGAGATAACGAAAAAGTTGGTTCAGCATTTGGCTGGAACTGGCAGATCTATTGTTATGGACAGTTGGTTCACTTCTTCCTCACTGATGGATGTCCTTAAAAATGAGTACCAGTTGTATTCCATCGCAGCCTTGAACCCAAACAGTGATATGATTCCGCCACTATTCCTATCTCAGTACAGAAAATGTCGAACATTCATGTCTGGATTTATTGATCATGAAGTATCATTGACATCGTATGTCAATACTGAGGGGAAATCCGTAAATGTATTGACTAATGAGCCTAGATATTACAGGAAAGGTCATATAAATCACACTACAGTTGTTTCTGTGTATAAGAAGAATCAGTCTGTGGTAGAAGTGGTGGATGTTCTCATGAATTACTACACTACAATGCAACACACAAATGATTGGACATTGTCCTTATTCTTTACTTTGCTAAACATTGCGTCCATTAACGCTCAAGTGTTGTGGTGCTCCCAAAACTCGAATGTTACGCAGCGTCGCTTATTCATTAAAGATTTGGCTCTGAGCTTACTAGAACAGGATGAAGAAAGAATGTTAATTTCTCCGATACACGATTTAGAAGAGAGGAAAAACAAATTTTCTCTGGGTGCGGAGAGTGAGAACAATGAGGAAGACGAGGAAGAAATGAACGAGCCTGCACAAAATTTCCCAAAAATGCCCCACATGCCCGAGGTGTCTATTACGGTAATGAGGCCTACTGGTGAGACACTGCACGCTCGCCAAGGTATTCACCAACTCGCTTCAAAATTGTGCCTAGTCTGCGGCCGCTCCTATAGGTACTCTCACAACGCACGCAGACATGAACTTACCGCTCACAGCTTCGACAggtatacaaacaaaattactccTAAAAAAACCCTCAATCATCTACAACCCAAACTGAGACCAAACCCATTCAACCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCATGAACAAGAACATGCCAACAAAAATAATGCCCATAAACAAAGTTATAACGCCACAGAAACCCATTCCAATAAAAACGTCGTCAAAGACACAAAATAATTTGCCTTATCCTCTACGCATTAAAGCactcaaagatttacaaattaaGAAGAAGGAGCCTCAGATTCTAAAGACCTTATTAACCTCTAAACCTGAAGTTCTGGTCTCAGAACCAGAAATTCTAAATTCCGGGCCTGAAAGTCCAGAAACATTGATATCTGAGCCTGAAATTGCATCCTTTCAAGTGGAAGCTATCCTTACGGAACCCGATGCTGATGCATACGACGATCCGCAACAAGGCGATGAAGAAGTCGATGAAGAAATGCagatcaatcaaaatcaaaactatGACACTGTCGATATGGACTCTGAGAACGAAATAGAGATTGCTCGTCAGCAAAGCATTGAACATGATGGTGAGGAAAATGCTGATGGGGAAGAGAATATGGACCATGATGACGACAATAACATGGAAGGCGGTCAGAGCGATAACGAGAAAGATGCCAATGACGATACAGCTGATAGTCAAGAGAACCAGGAGGAAGAAGATAGTGTTGATATTAAACCTGAAGATGATGGCCAAATGAAGGACGATGATGGCCAAGAAGAGGGAGAACACGAAGAAGTAGAAATGAATCATAACGAAAATGATGAAGAAGACGATGATGATCTGCCAATGTCTCTAGCGCCTGTCGTCGAAATAAGTGAGGGATTGCAAGGCGACTCGTTTAACAGCGAAGTCATTGAGGAAGAGGAGGAGCTCGACGAAACTGTCGATCCCAATGAGACCATTGAAGAGGAAGAGCAGGTTAAGGAACTTGACCCTGACAAAACATATGTTACTAAAACCCAAAGAGACTTTATCCAAAAATACCGCGATATTATTCAGCAAATCAATACCAAACGTTGTTTATGTTGTGATAGAGAACATCCGCGCAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGACACAAGGTACCAAAACACACATGCTACAATTGTGTCATCACGTTCGGACATATTGGCGCACTACTCAGCCATATGAGGTCGAATTCTTGCACCAATCTGTGGAAGATTATTTACAATGAAAATGGCATTACTGACGACTTGGTTCTCGAAGATGAGCCGAAAGAGGTCAAGGTTGCttacaaagatatttttaatgcCAGGTCTTACGCTTGCAAACTCTGCCCAGCTAAATTCCAACTAAAACAGTTTATAATGAAGCATGTTTTGGATACCCATGAAGATGGACAGTCAAGGGTACCACTCTGTTGTGTCCATTGTCGTTCTAGATTCAAAGATAAGAGTTTACTAAAGAAACATATTCGTAAAGGTGATTGTACAGTTTATATTGCTTGCGATTTGTGCACAGAAAAGTTCGGGAACATGCAGGACTTCAACGACCATGCTCTAGCCATCCATGCTGGCAGTTTCGATCAATCAGATAATCAGAACAAATGTGTTGACGGTCGACCAACAGACTGTCCTTTGTGTGGAAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATACATGCTGAGGAAAAACCTCACTATTGCCAGCATTGCGACGCGAAATACGAACAAGCTACTGATCTGAACAAACACATTTACATGGAGCATTCTGACAGAACACTAGGCATGCCGCCTGCTGAACCGGATATGTCCATAGTGAAAGAAGAAGCAGAGGAGTACCACTACTCCTGTACGGAATGTAATGCTATATTTGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCTGAACATAACCAGGTGGCCCACCACTGTGACCAGTGTGAGAAGAAATTCCTTCGTCCTTCAGAGCTGGCGGAGCACAAGAACACTCACTTGAGAGTTAAGTTTTACCCTTGCAGTGTATGTCCCAATTCTTACAGTACTCCACAGAAACTGTCTGAGCATGTGCAACAGTCACATCCAGGAATTGGCGCGGTCGCGGCAGCCGAGTCGGAATTCTTCTGCGACATCTGTATCAGAGCATTCAAGAGTCGCCAAGCTTACTCAAATCATATGCGTATTCACGCTAAAGTACCTACTACTAACAGGAAACCGACTCCAATCAAAGAGGGATTCGCGCCTCAAATTATTGGGAAACCCATCAAGCAGTATCCTATGGTTCAACCAGGTTTTGTATCATTTAAACCTAATTACAACATCCCTAACGCTCCATATTCTTGTGACATTTGCGGTAAAGGAttcatgcataagaaaaatatatggAAACACAAGAAAGTGTTGCATGCTGATATTTTAGTCGATAGACATGATAGTGAAGAGAACACTATGCACGCTTCCACGGAAGAGGACGAATTCAATCCTGATGAGAATGGTGCCGTTCTCTCAACGCCacaatttaatagttttaacttTACGAACTTCCCGAACAATGCTCAACAATCAACACCAGAAACAATGCCATATTCGTGTGACTTATGTAGCAAACGGTTCCCGCTTAGGACCAGTTTGTGGAAGCACAAGCGCGCAAAACACGGAATTGTTAATCCTAGCACTAGTGGTAACAACGAAACATCCACGCCGTCCGCTAGCGGGGAAAGCAGTAGTCGATCTAGCTGCACTATATGCAGAATCACATTTTCCGATAAGAAATCTTACTATCGCCATCGAAAGAATGTCCACAAATCTACTGTTCAAATGTGCAAAATATGTGGTAAACCGCTAAGTTCAACTTTGGAATTATACGAGCACTTAAAAGCCGCTCATGCAAGGGAATTACTGGGTTATAACGCTAACCAAGGCTCCAGTAAATCACAAGATATGTCACAAGAGATGGAACCCGATTACGAAAATGATCAGGAGTCTATCGACCCGAGCGTTGATTACCAAGCGCGGTACCCGTGCGATACTTGTGGCAAACAATTTGTTGGTTTGCTAGCTTTGCAAAACCATCAGTGCATAAATCAGATAGCGTCACAGCCACAAACGTTTGACTGTGAGATTTGTCACAAGAGTTACACTTCAATATCTGCGCTAAAAAGCCATCGTGGGTGGCATTTACGTTCGCCTGATGGAAAAGCAGCCGCCAACAATTCTGGCCTGTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGCAAACATGAGGTTGTGGATGCATCTCAACTGGCCAAGGTCACACATACCCCCACCCCCCCACCTGTCTCTGCAACCGCAGCGAAAAGAAGACTACCACCAGAGGTCGAAGTGACAGTCGTAAATCCGAACAAGAAACTGCGCTCAGACGACTCTGTCGACTTGGATATGCAAAGTTCTGGTGCCATCGAGGATAGGTACTGTACGATTTGCGATAAGGAATTTACAAAACGAGCGGCGTACCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTGTTTTGCCCGGTTTGTGATAAGAGTTTTACAAGAAAGTCCACATTGCTCATTCACATGAAGAAACATTACGAGAGCGGTGAGGGCAGTTCCTCTGCTACAGGTCAAGGAGACGATGATTACTCATGTGATTTGTGTGGAGCTCAGTACGACAATGATCAGGCATTGAGGGCGCACCGAGCGCGGCACCACGGCGAGGATGAAGAGTCGGCTGAAGAGAGTGATGACGGAAATGTTCCTATTGCTCCCCCCGGTGAATTCACGTGTGCGCAATGTGGCGATGGCGTCGCTACTCCCCGGGACCTCATCGCCCATCGCACAATGCACGCTACTCCCACCAAATTCTTTTGTAACATATGCAAAGTGTACTTCGCTCGGGCGCTCGACCTCTCCTCTCACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGGTTTTACATGAACAAGAAGAGCTTACAGCGGCACATTGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPLVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLLSLKDGNQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAGYSNKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTREECDVLQHSDHDSDTEAELQTEIDDSYVNSKIGYVCKNKQVMSKVPKLSTSINNARVKEAFKIRKRKSEVRKHCPRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSFTKSTSVSEIKTLIGMLYLHGIMRPTHQNCSDLWNSECGVPCVRNIMKYERFKFLLQNMSFDKEDDNSIIQFDIMKRMRKVFEIFAMNCRTAHDIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGLKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKLVQHLAGTGRSIVMDSWFTSSSLMDVLKNEYQLYSIAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSVNVLTNEPRYYRKGHINHTTVVSVYKKNQSVVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASINAQVLWCSQNSNVTQRRLFIKDLALSLLEQDEERMLISPIHDLEERKNKFSLGAESENNEEDEEEMNEPAQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMPINKVITPQKPIPIKTSSKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPQQGDEEVDEEMQINQNQNYDTVDMDSENEIEIARQQSIEHDGEENADGEENMDHDDDNNMEGGQSDNEKDANDDTADSQENQEEEDSVDIKPEDDGQMKDDDGQEEGEHEEVEMNHNENDEEDDDDLPMSLAPVVEISEGLQGDSFNSEVIEEEEELDETVDPNETIEEEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCTEKFGNMQDFNDHALAIHAGSFDQSDNQNKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATDLNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPTPIKEGFAPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMHASTEEDEFNPDENGAVLSTPQFNSFNFTNFPNNAQQSTPETMPYSCDLCSKRFPLRTSLWKHKRAKHGIVNPSTSGNNETSTPSASGESSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDMSQEMEPDYENDQESIDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIASQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDASQLAKVTHTPTPPPVSATAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQSSGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00447463;
80% Identity: -