Basic Information

Insect: Agrotis segetum
Gene Symbol: Zfa
Assembly: GCA_036375495.1
Location: JAQSVV010000194.1:5064174-5072573[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0082 0.74 11.3 1.1 3 23 729 750 728 750 0.96

2 23 0.26 24 6.6 0.3 1 22 1134 1155 1134 1155 0.95

3 23 9.5 8.5e+02 1.7 0.4 1 22 1197 1218 1197 1220 0.82

4 23 0.021 1.9 10.1 4.8 2 22 1230 1250 1229 1250 0.93

5 23 2.7 2.5e+02 3.4 0.0 3 23 1259 1280 1257 1280 0.89

6 23 0.022 2 10.0 0.2 3 23 1301 1322 1299 1322 0.96

7 23 0.0046 0.42 12.1 2.4 1 23 1328 1351 1328 1351 0.95

8 23 0.16 14 7.3 0.0 1 23 1377 1400 1377 1400 0.90

9 23 0.024 2.1 9.9 3.4 1 23 1405 1427 1405 1427 0.97

10 23 0.011 0.98 11.0 0.2 1 23 1433 1456 1433 1456 0.95

11 23 0.0051 0.46 12.0 0.8 1 23 1469 1491 1469 1491 0.97

12 23 0.00022 0.02 16.3 1.8 1 23 1541 1564 1541 1564 0.97

13 23 0.0022 0.2 13.1 1.3 1 23 1624 1647 1624 1647 0.96

14 23 0.0015 0.13 13.7 1.5 2 23 1674 1696 1673 1696 0.96

15 23 0.05 4.5 8.9 0.1 2 23 1702 1724 1701 1724 0.94

16 23 0.013 1.1 10.8 0.2 1 21 1768 1788 1768 1789 0.95

17 23 0.00053 0.048 15.1 1.0 1 23 1799 1821 1799 1821 0.93

18 23 0.00014 0.013 16.9 0.3 2 23 1914 1936 1914 1936 0.93

19 23 5e-07 4.5e-05 24.6 1.4 3 23 1943 1963 1942 1963 0.98

20 23 0.028 2.5 9.7 0.3 1 23 1981 2003 1981 2004 0.95

21 23 0.23 21 6.8 0.0 1 23 2027 2049 2027 2049 0.97

22 23 0.035 3.1 9.4 0.6 1 23 2055 2078 2055 2078 0.95

23 23 0.00032 0.029 15.8 0.4 1 23 2086 2109 2086 2109 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0082	0.74	11.3	1.1	3	23	729	750	728	750	0.96
2	23	0.26	24	6.6	0.3	1	22	1134	1155	1134	1155	0.95
3	23	9.5	8.5e+02	1.7	0.4	1	22	1197	1218	1197	1220	0.82
4	23	0.021	1.9	10.1	4.8	2	22	1230	1250	1229	1250	0.93
5	23	2.7	2.5e+02	3.4	0.0	3	23	1259	1280	1257	1280	0.89
6	23	0.022	2	10.0	0.2	3	23	1301	1322	1299	1322	0.96
7	23	0.0046	0.42	12.1	2.4	1	23	1328	1351	1328	1351	0.95
8	23	0.16	14	7.3	0.0	1	23	1377	1400	1377	1400	0.90
9	23	0.024	2.1	9.9	3.4	1	23	1405	1427	1405	1427	0.97
10	23	0.011	0.98	11.0	0.2	1	23	1433	1456	1433	1456	0.95
11	23	0.0051	0.46	12.0	0.8	1	23	1469	1491	1469	1491	0.97
12	23	0.00022	0.02	16.3	1.8	1	23	1541	1564	1541	1564	0.97
13	23	0.0022	0.2	13.1	1.3	1	23	1624	1647	1624	1647	0.96
14	23	0.0015	0.13	13.7	1.5	2	23	1674	1696	1673	1696	0.96
15	23	0.05	4.5	8.9	0.1	2	23	1702	1724	1701	1724	0.94
16	23	0.013	1.1	10.8	0.2	1	21	1768	1788	1768	1789	0.95
17	23	0.00053	0.048	15.1	1.0	1	23	1799	1821	1799	1821	0.93
18	23	0.00014	0.013	16.9	0.3	2	23	1914	1936	1914	1936	0.93
19	23	5e-07	4.5e-05	24.6	1.4	3	23	1943	1963	1942	1963	0.98
20	23	0.028	2.5	9.7	0.3	1	23	1981	2003	1981	2004	0.95
21	23	0.23	21	6.8	0.0	1	23	2027	2049	2027	2049	0.97
22	23	0.035	3.1	9.4	0.6	1	23	2055	2078	2055	2078	0.95
23	23	0.00032	0.029	15.8	0.4	1	23	2086	2109	2086	2109	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCCACCAATGTCTGCAGGAAATGCATGGATAATGTCAATAACTGGcatgtttttaaaaatgtatgtgaAAGGACACAAAACAAACTACTGTCTTTAAAAGATGGCAACCAACTAGAAGAGgtaaaaataaaaagtgaacCACTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTTTTCAAACAAACTGCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGATCCCCGAATGGATTGGCACCGGGTCCATGCAATTTTGGACATGGTTCAAGAGGATGAGGTGATTGACTCTCTACAGACGAGGGAAGAATGTGATGTTCTACAGCATTCTGACCATGACTCAGATAGTGAAGCCGAACTCCAGACAGAAATTGATGATAGTTATGTTAATTCCAAAAGCGGATACATatgcaaaaataaacaagttatGTCAAAAGTTCCAAAGCTATCAACTTCTGGATATAATGCCAGAGTTAAAGAAGCTTTCAAACTCAGAAAACGTAAATCAGAAGTTCTTAAACATTTGCCACGACCTAAAAATGCGTGGCAGTTGTTATTCACCGATGACCTACTAGAATTGATTGTTGCTTCTACTAATGACAATATTGTGACAAATGGGAAAAGTTTCACGGAGTCAACGAGCGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATCTGCACGGCATAATGCGGCCAACGCATCAGAAATGTATCGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAATATCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATAAGCTTCGATAAAGAGGACGACGACAGCATAATACAGTTTGACATAATGAAGCGTATGCGCAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACATCTCACGAGATCGAGAATGTCGCAGTTATTGATGAGATCATTGTGCCAGTTTACGGACCTTGCCCATTTCGATACGACATTGATAAGAAGCAGCTGAAGAGGGGTATAAAAATGGTATTACTAGTTGATTCATCCACTTTCTATGTGAGCAATTTAGACGTCATTACTGATGCTTATTTTGGCGCCGAGgagataacaaaaaaattggtcCAGCATTTAGCTGGAACTGGCAGATCTATTGTGATGGACAGTTGGTTCACATCTTCATCACTGATGGATATCCTTAAAAATGAGTACCAGTTGTATTCTATTGCAGCCTTGAACCCAAACAGTGATATGATTCCACCACTGTTCCTATCTCAATACAGGAAATGTCGAACATTCATGTCTGGATTTATTGATCATGAAGTATCACTGACATCGTATGTCAACACTGAGGGGAAATCCGTAAACGTATTGACTAATGAACCTAGATATTACAGGAAAGGTCATATAAATCACACTACAGTTGTGTCAGTGTATAAAAAGAATCAGTCTGCTGTAGAAGTTGTGGATGTTCTTATGAGTTACTACACCACGATGCAACATACAAATGATTGGACATTGTCTTTATTCTTTACTTTGCTAAACATTGCGTCTGTCAACTCTCAAGTATTGTGGTGCTCTCAACACTCCAATGTTACTCAGCGTCGCTTATTCATTAAAGATTTGGCCCTCAGCTTACTAGAACCAGAAGAAAGGATGCTAATATCTCCGATTCACGATATAGAGGAAAGGAAAAACAGATTCTCTCTTATACGCAATGGTGTGCAACCGTATAAGAACAGGAGAAGATGCAAAATATGTGTGAAAACAACGAAACGAGATAGGAGAACCAGACAGTTTTGTGGTGCGGAAAGCGAAAACAATGAAGAAGACGAGGAAGAAATGAACGAGCCGGCACAAAATTACCCGAAAGTGCCCCACATGCCCGAGGTGTCCATCACGGTCATGAGGCCTACTGGTGAGACTCTACACGCTCGTCAAGGCATTCACCAACTCGCGTCCAAACTGTGCCTCGTGTGCGGCCGCTCCTACAGGTACTCTCACAACGCACGTAGACATGAGCTTACTGCTCACAGCTTCGACAGatacacaaacaaaattactcctaaaaAAACCCTTAATCATTTACAACCCAAACTCAGACCAAACCCATTCAATCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTTATGAATAAGAACATGCCAACAAAAATAATGCAAATGAACAAAGTTATAACGCCTCAGAAACCCATTCCAATCAAGACGTCGACAAAGACACAAAATAATTTGCCTTACCCTCTACGCATAAAAGCactcaaagatttacaaattaaGAAAAAGGAGCCTCAGATTCTGAAGACATTATTAACCTCCAAACCTGAAGTTCTGGTCTCAGAACCAGAAATACTAAATTCTGGACCTGAAAGTCCAGAGACGTTGATATCCGAGCCGGAAATTGCATCTTTTCAAGTGGAAGCTATTCTTGCTGAGCCCGATGCCGATGCATACGATGATCCACAGCAAGGCGACGAAGAAGTCGATGAAGAAATGCaaaacaatcaaaatcaaaactatgATACAGTTGAAATGGACTCTGAGAACGAAATAGAGATTGCTCGTCAGCAAAGTATTGAACAAGAGGGCGATGAAAATGCTGATGGAGAAGAGAATGTGGACCATGATGACGATAATAATATGGAAGGCGGTCAGAGCGAAAATGAGAAAGACGCTAATGACGATACTGCTGATAGTCAAGAACACATGGAAGAAGAAGATAGTGTTGATATTAAACCTGAAGAAAATGTAAAAGACGATGAGGGCCAGGAGGAGAGAGAACACGAAGAGGTAGAAATGAATCATAACGAAAACGAGGAAGAAGACGATGACCTGCCAATGTCACTAGCCCCCGTCGTCGAAATAAGTGAGGGAATGCAAGGCGAGTCGTTTAATAGCGAAGTTAATGAAGAAGATGAGGAACTTGATGAAACTGTCGATCCCAATGACACCATCGAAGATGAAGAGCAGGTTAAAGAACTGGACCCTGACAAAACATACGTCACAAAAACCCAAAGAGACTTCATCCAAAAGTACCGTGACATCATTCAGCAAATTAACACGAAGCGTTGTTTATGTTGTGATAGAGAACATCCGCGCAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGTCACAAGGTTCCAAAACACACATGCTACAATTGTGTCATCACGTTTGGACATATTGGCGCACTACTCAGCCATATGAGGTCGAATTCTTGCACGAATTTGTGGAAGATTATTTACAATGAAAATGGCATTACCGACGACTTGGTCCTCGAAGATGAACCAAAAGAGGTCAAGGTTGCATACAAAGATATTTTCAATGCCAGGTCATATGCTTGCAAACTGTGCCCAGCGAAATTCCAACTGAAGCAATTTATAATGAAGCATGTTTTGGATACCCATGAAGATGGGCAGTCAAGGGTACCACTCTGTTGTGTCCACTGCCGTTCTAGGTTTAAGGATAAAAGTTTACTTAAGAAACACATTCGTAAAGGTGATTGTACTGTATACATTGCCTGCGATTTGTGTTCCGAAAAGTTCggaaacatgcaagacttcaaCGACCATGCACTAGCCATCCACGCTGGCAGTTTTGATCAGACAGATAATCAGAGCAAATGTGTTGACGGTCGACCAACAGACTGTCCTTTATGTGGAAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATACATGCGGAGGAGAAACCTCATTACTGTCAGCATTGTGACGCTAAATACGAACAAGCTACTGAACTGAACAAACACATTTACATGGAGCACTCTGACAGAACATTAGGCATGCCGCCTGCTGAACCAGATATGTCCATTGTGAAAGAGGAAGCAGAGGAGTACCACTACTCTTGTACGGAATGTAATGCCATATTTGAAACTGTCGATGCGTGGACTGATCACCAAGTCGCTGAACATAACCAAGTGGCTCATCACTGCGATCAGTGTGAGAAGAAATTCCTTCGTCCTTCGGAGCTGGCAGAGCACAAGAACACGCACTTGCGGGTTAAATTTTATCCTTGTAGTGTGTGTCCGAACTCTTACAGCACGCCACAGAAACTGTCTGAGCATGTGCAACAGTCCCATCCTGGAATAGGTGCGGTCGCGGCAGCCGAGTCCGAATTCTTCTGTGACATCTGTATCAGAGCATTTAAAAGTCGCCAAGCGTACTCAAATCATATGCGTATTCACGCTAAAGTACCTACTACTAACAGGAAACCAGCTGTAATTAAAGAGGGATTCGCGCCTCAAATTATTGGGAAACCCATCAAGCAGTATCCTGTGGTTCAATCGGGTTTTGTATCGTTTAAACCTAATTACAATATACCTAACGCTCCATATTCTTGTGACATTTGTGGTAAAGGATTCATGCATAAGAAAAATATATGGAAACATAAGAAAGTGTTACATGCTGATATTTTAGTTGATAGACATGATAGTGAAGAGAACACTATGCAAGCTTCAACAGAAGAAGATGAATTCAACCCGGACGAAAATGGTGCAGTACTCTCAACACCACAATTTAATAGTTTCAACTTTACGAATTTCCCGAACAATGCTCAACAATCAACTCCAGAAACAATGCCATATTCGTGTGAATTATGTAGTAAACGGTTCCCGCTTAGGACCAGTTTGTGGAAACACAAGCGCGCTAAGCACGGAATTGTTAACCCCGGTAGTAGCGGTAGCAACGAGACATCCACACCATCCGCTAGTGGGGAAAGCAGTGCAAGATCTAGCTGCACTATATGCAGAATCACATTTGCAGATAAAAAATCTTACTATCGTCACCGTAAGACTGTGCACAAATCTACCGTTCAAATGTGCAAAATATGTGGTAAACCCCTAAGTTCAACTTTAGAATTATATGAGCACTTGAAAGCTGCTCATGCAAGGGAATTACTGGGTTACAACGCTAACCAAGGCTCCAGTAAATCACAAGATGTGTCACAAGAGATGGAACCCGATTATGAAAATGATCAAGAGTCTGTAGATCCTAGCGTTGATTACCAGGCGCGCTACCCGTGCGATACCTGTGGCAAACAATTTGTTGGGTTGCTAGCGTTGCAGAACCACCAGTGTATCAATCAAATACCATCTCAGCCACAGACGTTTGATTGTGAGATTTGTCACAAGAGTTACACTTCAATATCTGCACTAAAAAGCCATCGAGGTTGGCATTTACGTTCACCTGATGGAAAAGCAGCCGCTAATAATTCTGGTCTGTGGATGCCCCAGCACAAAGTTACAAGCAAAATAAGCAAACACGAGGTCATAGACCCGTCACAACTAGCTAAGGTTACACACACCTCCACTCCCCCACCTGTGTCTGCTACCGTAGCGAAGAGAAGACTCCCACCAGAGGTCGAAGTGACAGTAGTAAATCCGAATAAGAAATTGCGCTCAGACGACTCAGTCGACTTAGACATGCAAAATTCAGGTGCAATCGAGGATAGGTATTGTACTATTTGTGACAAGGAATTTACAAAACGAGCGGCGTACCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTGTTTTGTCCGGTCTGTGATAAAAGTTTTACAAGGAAGTCCACACTACTCATTCACATGAAGAAACATTACGAGAGCGGTGAGGGCAGTTCCTCTGCTACAGGTCAAGGGGACGATGATTACTCCTGTGATTTGTGTGGAGCTCAGTATGACAATGATCAGGCATTGAGGGCGCACCGAGCGCGGCACCACGGAGAAGAGGAAGAGTCGGCTGAAGAGAGTGATGACGGAAATGTTCCTATTGCTCCTCCCGGTGAATTCACATGTGCGCAATGTGGCGATGGCGTCGCTACGCCGAGGGACCTCATCGCCCATCGCACAATGCATGCTACTCCCACCAAATTCTTCTGTAACATATGCAAAGTGTACTTCGCTCGGGCGCTCGACCTCTCGTCGCATACTCGTGCGCGGCACGCTGACAACGATAAGGTATTCTTCCCTTGTGCCATGTGCGACAGGTTTTATATGAACAAGAAGAGCTTACAGCGGCACATCGAGATGGCCCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLLSLKDGNQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAGFSNKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQEDEVIDSLQTREECDVLQHSDHDSDSEAELQTEIDDSYVNSKSGYICKNKQVMSKVPKLSTSGYNARVKEAFKLRKRKSEVLKHLPRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSFTESTSVSEIKTLIGILYLHGIMRPTHQKCIDLWNSECGVPCVRNIMKYERFKFLLQNISFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHEIENVAVIDEIIVPVYGPCPFRYDIDKKQLKRGIKMVLLVDSSTFYVSNLDVITDAYFGAEEITKKLVQHLAGTGRSIVMDSWFTSSSLMDILKNEYQLYSIAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSVNVLTNEPRYYRKGHINHTTVVSVYKKNQSAVEVVDVLMSYYTTMQHTNDWTLSLFFTLLNIASVNSQVLWCSQHSNVTQRRLFIKDLALSLLEPEERMLISPIHDIEERKNRFSLIRNGVQPYKNRRRCKICVKTTKRDRRTRQFCGAESENNEEDEEEMNEPAQNYPKVPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMQMNKVITPQKPIPIKTSTKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILAEPDADAYDDPQQGDEEVDEEMQNNQNQNYDTVEMDSENEIEIARQQSIEQEGDENADGEENVDHDDDNNMEGGQSENEKDANDDTADSQEHMEEEDSVDIKPEENVKDDEGQEEREHEEVEMNHNENEEEDDDLPMSLAPVVEISEGMQGESFNSEVNEEDEELDETVDPNDTIEDEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCSEKFGNMQDFNDHALAIHAGSFDQTDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATELNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPAVIKEGFAPQIIGKPIKQYPVVQSGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEDEFNPDENGAVLSTPQFNSFNFTNFPNNAQQSTPETMPYSCELCSKRFPLRTSLWKHKRAKHGIVNPGSSGSNETSTPSASGESSARSSCTICRITFADKKSYYRHRKTVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDVSQEMEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTSTPPPVSATVAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQNSGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNDQALRAHRARHHGEEEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00447463;
80% Identity: -