Cpis015070.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceramica pisi
Gene Symbol
-
Assembly
GCA_963859965.1
Location
OY982535.1:18325774-18334382[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.012 1.3 10.8 1.6 3 23 686 707 685 707 0.96
2 22 0.26 30 6.6 0.3 1 22 1092 1113 1092 1113 0.95
3 22 0.025 2.9 9.8 3.9 2 22 1188 1208 1187 1208 0.93
4 22 0.11 13 7.7 0.1 2 23 1216 1238 1215 1238 0.89
5 22 0.022 2.5 10.0 0.2 3 23 1259 1280 1257 1280 0.96
6 22 0.0059 0.68 11.8 4.2 1 23 1286 1309 1286 1309 0.95
7 22 0.16 18 7.3 0.0 1 23 1335 1358 1335 1358 0.90
8 22 0.023 2.7 9.9 3.4 1 23 1363 1385 1363 1385 0.97
9 22 0.011 1.2 11.0 0.2 1 23 1391 1414 1391 1414 0.95
10 22 0.005 0.57 12.0 0.8 1 23 1427 1449 1427 1449 0.97
11 22 0.00022 0.025 16.3 1.8 1 23 1499 1522 1499 1522 0.97
12 22 0.00027 0.031 16.0 0.9 1 23 1581 1604 1581 1604 0.96
13 22 0.0029 0.34 12.7 2.1 2 23 1632 1654 1631 1654 0.95
14 22 0.049 5.6 8.9 0.1 2 23 1660 1682 1659 1682 0.94
15 22 0.012 1.4 10.8 0.2 1 21 1726 1746 1726 1747 0.95
16 22 0.00052 0.059 15.1 1.0 1 23 1757 1779 1757 1779 0.93
17 22 0.00014 0.016 16.9 0.3 2 23 1872 1894 1872 1894 0.93
18 22 4.9e-07 5.6e-05 24.6 1.4 3 23 1901 1921 1900 1921 0.98
19 22 0.085 9.7 8.2 0.6 1 23 1939 1961 1939 1962 0.95
20 22 0.18 20 7.1 0.0 1 23 1985 2007 1985 2007 0.98
21 22 0.034 3.9 9.4 0.6 1 23 2013 2036 2013 2036 0.95
22 22 0.00032 0.036 15.8 0.4 1 23 2044 2067 2044 2067 0.96

Sequence Information

Coding Sequence
ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTTGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCTACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGcatgtttttaaaaatgtatgtgaaAGGACACAAAACAAACTACAGTCTCTGAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAACCACTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTTTTCAAACAAAGTACAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAGATGTGTGGATCCACGAATGGATTGGCATCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAGACAAAGGAAGAGTGTGATGTTTTGCAGCAATCTGATCATGACTCAGACTCAGAAGCTGAACTCCAAACAGAAATTGATGATGATTATGTTGATTGCAAAAGCGGTTacatttgcaaaaataaaaaagttatatcaaAAGCTCCAAAATTATCAACTTCTGTGAATAATGCCAGAATTAAAGAAGCTTTCAAAGTCAGGAAACGTAAATTAGAAGTTCGTAAACATTGTTCACGACCTAAAAATGCGTGGCAATTGTTATTCACCGATGACCTACTAGAATTGATTGTTGCTTCAACTAATGACAATATTGTGACAAATGGGAAAAGTTTCTCGAAGTCAACTAGCGTCAGCGAAATTAAAGCGCTTATCGGTATTCTGTATCTGCACGGCATATTGCGACCGACGCATCAGAAATGTTCTGACCTTTGGAACAGTGAATGTGGCGTTCCATGCGTCAGGAATGTCATGAAGTACGAAAGGTTCAAATTCTTGCTTCAAAACATGAGTTTCGATAAAGAGGACGGCGATAGCATTATACAGTTCGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTTGCCATGAATTGCAGAACATCTCTGGAGATCGAGAATGTCGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGGCCTTGCCCATTTCGATACGATATTGATAAGAAGCCGTTGAAGCGAGGCATAAAAATGGTTTTGCTAGTTGATTCATCCACATTCTACATGAGCAATTTAGACGTCATTACTGATCCTTACTTTGGCGCCGACGAGATAGCAAAAAAGTTGGTTCAGCATTTAGCTGGAACTGGCAGATCTATCGTTATGGACAGTTGGTTTACATCTTCCTCGTTAATGGATTGCCTCAAAAATGAGTACCAGTTGTATTCCATAGCAGCCCTGAACCCAAAGAGTGATATGATTCCACCGCTATTCTTATCTCAATACAGGAAAACTCGGACATTCATGTCTGGATTTATTGATGATGAAGTATCATTGACATCCTACGTCAATACAGAGGGAAAATCAGTAAATGTGTTGACAAATGAGCCCCGGTATTACAGGAAAGGTCATATAAATCACACTACTGTTGTATCAGTGTATAAGAAGACTCAGTCTGCCGTAGAAGTTGTGGATGTTCTCATGAATTACTACACTACAATGCAGCATACAAATGATTGGACATTgtctttatttttcacattgCTGAATATTGCCTCGGTGAATGCTCAAGTGTTATGGTGCTCTCAAAACTCGAATGTTTCTCAGCGTCGTTTATTTATCAAAGATTTAGCTTTAGGTTTGCTTGAACCAGAGGAAGAAAGAATTTTAATATCTCCGGGTGCGGAGAGTGAGAATAATGAAGAAGATGAGGAAGAAGTTAATGAGCCTGCCCAAAACTTCCCAAAAATGCCCCACATGCCCGAGGTATCCATCACAGTCATGAGACCCACTGGTGAAACCCTGCACGCTCGCCAAGGTATTCACCAACTCGCCTCCAAACTGTGCCTCGTCTGCGGCCGCTCCTACAGGTACTCCCATAACGCACGCAGACATGAGCTTACCTCTCACGGCTTCGACAGGTATACAAACAAAATTACGCCTAAAAAAACCCTCAATCATCTACAACCTAAACTCAGACCGAATCCATTCAACCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCATGAACAAGAATATGCCAACAAAAATAATGCCCATGAACAAAGTTATAACGCCACAGAAACCCATTCCAATAAAGACGTCAACAAAGACACAGAATAATTTGCCTTATCCCCTACGCATTAAAGCactcaaagatttacaaattaaGAAAAAGGAGCCTCAGATTCTAAAGACGTTGTTAACATCTAAACCTGAAGTTCTGGTTTCAGAACCTGAAATTTTGAATTCTGGGCCTGAAAGTCCCGAAACATTGATATCTGAGCCTGAAATTGCGTCTTTTCAAGTCGAAACCATTTTAACGGAACCCGACGCCGACGCCTATGATGATCCTCAGCAAGGCGACGAAGAAGTTGATGAAGAAATACAGAACAATCAAAGTCAAAACTATGACACAGTCGATATGGACTCTGAAAACGAAATAGAGATTGCTCGTCAGCAAGGCATGGAACACGACGGTGAGGAAAATGCTGACGGAGAAGAGAATGTCGATCATGATGACGATAACAATATGGAAGGCGCTCAGAGCGAGAACGAGAAAGATGGCAATGACGATACAGCTGAAAGTCAGGAGCACATAGATGAAGAAGATAGTGTTGATGTTAAACCTGAAGATCAAATGAAGGACGACGAGGATCAAGAGGAGGCTGAACATGAAGAAGTAGAGATGAATCATAACGAGAACGAGGAAGATGACGATGATGAGCTTCCGATATCATTAGCGCCAGTTGTCGAGATAAACGAAGGATTACAAGCCAACTCGTTTAACAGCGAAGTCAATGAAGAAGACGAGGAACTCGACGAAACTGTCGATCCTAATGAAACCATCGAAGAAGAGGAGCAGGTTAAAGAACTTGACCCCGACAAAACATATGTTACTAAAACCCAAAGAgacttcatacaaaaatatcgCGACATAATTCAGCAAATCAACACGAAGCGTTGTTTGTGTTGTGACCGTGAGCATCCGCGTAGGAAAGCTGTTATACAACACTTGCAGAAAAACGGACACAAGGTACCGAAACATACTTGTTACAATTGTGTCATCACGTTCGGACATATTGGCGCACTACTCAGCCATATGAGGTCGAATTCTTGCACTAATCTGTGGAAGATTATTTACAATGAAAATGGCATTACTGACGACTTGGTTCTAGAAGATGAGCCGAAAGAGGTCAAGGTGGCTTACAAAGATATTTTCAATGCTAGGTCGTACGCTTGCAAGCTCTGCCCAGCTAAATTCCAACTGAAACAGTTTATCATGAAGCATGTTGCAGATACTCATGAAGATGGCCAGTCTAGGGTAGCGCTCTGCTGTGTTCACTGCCGCGCTAGGTTTAAAGAAAAGAGTTTACTGAAGAAACACATTCGCAAAGGTGATTGTACAGTTTATATCTCTTGTGATTTGTGCTCAGAAACGTTCAGGAACATGCAGGACTTCAACGATCATGCGCTAGCCATCCACGCTGGCAGTTTCGATCAGTCAGATAATCAGAGCAAATGTGTTGATGGCCGACCAACCGACTGTCCTTTGTGCGGAAAGAAGAACAGCAGTTATCCGAATTTAGTGAAACATTTGAAGATTATACACGCGGAGGAGAAACCTCACTATTGTCAACATTGCGACTCTAAATTCGAGCAATCTAATGATCTGAACAAACATATTTACATGGAGCATTCTGACAGAACTTTAGGCATGTCGACCGCAGAGCCGGATATGTCTATAGTGAAGGAAGAAGCCGAGGAGTACCATTACTCTTGCACAGAATGTAATGCTATTTTCGAAACTGTCGATGCGTGGACTGATCACCAAGTCGCCGAACATAACCAGGTCGCCCACCACTGTGACCAGTGTGAGAAGAAGTTCCTGCGTCCTTCAGAGCTAGCCGAGCATAAGAACACTCACCTGAGGGTTAAGTTCTATCCTTGCAGTGTATGCCCTAACTCATACAGCACTCCGCAAAAACTATCGGAGCATGTGCAACAGTCACATCCAGGAATTGGCGCCGTCGCGGCAGCTGAGTCAGAATTCTTCTGCGACATCTGCATCAGAGCATTCAAAAGTCGCCAAGCTTACTCAAACCATATGCGCATTCACGCTAAAGTACCGACTACTAACAGGAAACCTACTGTAGGTAAAGAGGGTTTCGCGCCTCAAATCATAGGGAAACCTATCAAACAATATCCTGTGGTTCAACCTGGGTTTGTCTCATTTAAACCTAACTACAACATCCCTAACGCTCCATATTCTTGTGACATTTGTGGTAAAGGATTCATGCACAAGAAGAATATATGGAAACACAAGAAAGTTTTGCATGCCGATATTTTAGTCGATAGACATGATAGTGAAGAGAACACTATGCAAGCATCCACTGAAGAGGAGGAATTCAACCCCGATGAAAACGGAGCCATTCTCTCAACGCCACAATTTAACAGTTTTAATTTTACGAACTTCGCAAACAATGCTCAACAAACGCATCCAGACACGTCGTACGAATGTGATATATGTAGCAAACGGTTCCCGCTGAAGACCAGTTTATGGAAACACAAGCGCGCTAAACACGGAATTGTAAACCCTAGCACTAGTGGTAACAGCGATGTAACATCCACACCAGCCGCTAGCGGGGAAGGCAGTAGTAGATCTAGCTGCACTATATGTAGAATCACATTTTCAGACAAGAAATCTTATTATCGCCATCGAAAGAATGTCCACAAATCTACTGTTCAAATGTGCAAAATATGCGGCAAACCGCTAAGTTCAACTTTGGAACTATACGAGCACTTAAAAGCCGCTCACGCAAGGGAATTACTTGGTTATAACGCTAATCAGGGCTCCAGTAAATCACAGGATGTGTCACAAGATGTTGAACCTGATTACGAAAATGATCAGGAATCAGCCGACCCTAGCGTCGATTACCAAGCGCGCTACCCGTGCGATACCTGTGGCAAACAATTCGTTGGTCTGCTAGCATTGCAGAACCATCAGTGCATCAACCAGGTGCCATCACAACCACAGACGTTTGACTGCGAGATTTGTCACAAGAGTTACACTTCAATATCTGCATTAAAAAGCCACCGTGGGTGGCATTTACGTTCACCGGATGGAAAGGCAGCTGCCAATAACTCTGGCCTTTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGTAAACACGAAGTAATCGACCCGTCTCAACTTGCGAAGGTCACACATACTCCCACTCCCCCTCCTGTCACAGCGACCGTAGCGAAAAGAAGACTACCACCAGAGGTCGAAGTGACAGTCGTAAATCCCAACAAGAAATTGCGCTCAGACGACTCGGTCGACATGGATCTGCAAAATTCTGGTTCAATCGAGGATAGATACTGTACGATTTGCGACAAGGAATTTACAAAACGAGCAGCTTATCAGCGCCACATGGACGAAGTACATCAACCGAACTCAGTGTTTTGTCCGGTCTGTGATAAGAGTTTTACAAGGAAGTCGACGTTGCTCATCCACATGAAGAAGCACTACGAGAGTGGTGAGGGCAGTTCCTCTGCTACAGGTCAGGGAGATGATGATTTCTCATGCGATTTATGTGGCGCTCAGTATGACAGTGATCAGGCGCTGAGGTCGCACCGAGCTCGGCACCATGGAGAAGACGAAGAGTCGGCGGAAGAGAGTGACGACGGCAATGTTCCTATAGCCCCTCCCGGAGAGTTCACGTGTGCGCAGTGCGGCGACGGCGTCGCCACGCCCAGGGACCTCATCGCGCATCGCTCCATGCACGCCACTCCCACCAAGTTCTTCTGTAACATATGCAAAGTGTACTTCGCTCGGGCGCTCGACCTGTCGTCACACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGTGATAGGTTTTACATGAACAAGAAGAGTTTACAGCGGCATATCGAGATGGCTCACTGA
Protein Sequence
MNVNYDRVCRLCLSSRGELLPIFPTTSLDDSEPPVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLQSLKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAGFSNKVQPEGPPILASLGLTPRSDKRCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDVLQQSDHDSDSEAELQTEIDDDYVDCKSGYICKNKKVISKAPKLSTSVNNARIKEAFKVRKRKLEVRKHCSRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSFSKSTSVSEIKALIGILYLHGILRPTHQKCSDLWNSECGVPCVRNVMKYERFKFLLQNMSFDKEDGDSIIQFDIMKRMRKVFEIFAMNCRTSLEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGADEIAKKLVQHLAGTGRSIVMDSWFTSSSLMDCLKNEYQLYSIAALNPKSDMIPPLFLSQYRKTRTFMSGFIDDEVSLTSYVNTEGKSVNVLTNEPRYYRKGHINHTTVVSVYKKTQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWCSQNSNVSQRRLFIKDLALGLLEPEEERILISPGAESENNEEDEEEVNEPAQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHGFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMPMNKVITPQKPIPIKTSTKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILTEPDADAYDDPQQGDEEVDEEIQNNQSQNYDTVDMDSENEIEIARQQGMEHDGEENADGEENVDHDDDNNMEGAQSENEKDGNDDTAESQEHIDEEDSVDVKPEDQMKDDEDQEEAEHEEVEMNHNENEEDDDDELPISLAPVVEINEGLQANSFNSEVNEEDEELDETVDPNETIEEEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVADTHEDGQSRVALCCVHCRARFKEKSLLKKHIRKGDCTVYISCDLCSETFRNMQDFNDHALAIHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDSKFEQSNDLNKHIYMEHSDRTLGMSTAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPTVGKEGFAPQIIGKPIKQYPVVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAILSTPQFNSFNFTNFANNAQQTHPDTSYECDICSKRFPLKTSLWKHKRAKHGIVNPSTSGNSDVTSTPAASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDVSQDVEPDYENDQESADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTPTPPPVTATVAKRRLPPEVEVTVVNPNKKLRSDDSVDMDLQNSGSIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDFSCDLCGAQYDSDQALRSHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00017541;
90% Identity
iTF_00952905;
80% Identity
-