Basic Information

Insect: Polyploca ridens
Gene Symbol: -
Assembly: GCA_951394255.1
Location: OX596247.1:5691828-5701650[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.36 28 6.3 1.5 3 23 674 695 673 695 0.96

2 23 0.27 21 6.6 0.3 1 22 1083 1104 1083 1104 0.95

3 23 8.8 6.8e+02 1.9 0.3 1 22 1146 1167 1146 1169 0.82

4 23 0.24 18 6.8 0.6 3 21 1180 1198 1178 1199 0.94

5 23 1.4 1.1e+02 4.5 0.1 3 23 1208 1229 1206 1229 0.89

6 23 0.008 0.62 11.5 0.1 3 23 1250 1271 1248 1271 0.96

7 23 0.02 1.5 10.2 2.8 1 23 1277 1300 1277 1300 0.92

8 23 0.16 13 7.3 0.0 1 23 1326 1349 1326 1349 0.90

9 23 0.025 1.9 9.9 3.4 1 23 1354 1376 1354 1376 0.97

10 23 0.013 1 10.8 0.3 1 23 1382 1405 1382 1405 0.95

11 23 0.003 0.24 12.8 1.3 1 23 1418 1440 1418 1440 0.97

12 23 0.00081 0.063 14.6 2.0 1 23 1488 1511 1488 1511 0.97

13 23 0.0031 0.24 12.8 1.6 1 23 1571 1594 1571 1594 0.96

14 23 0.00071 0.055 14.8 2.1 2 23 1621 1643 1620 1643 0.96

15 23 0.11 8.8 7.8 0.1 2 23 1649 1671 1648 1671 0.93

16 23 0.013 1 10.8 0.2 1 21 1715 1735 1715 1736 0.95

17 23 0.0016 0.12 13.7 0.6 1 23 1746 1768 1746 1768 0.93

18 23 0.00015 0.011 16.9 0.3 2 23 1857 1879 1857 1879 0.93

19 23 4.4e-07 3.4e-05 24.9 1.4 3 23 1886 1906 1885 1906 0.98

20 23 0.006 0.46 11.9 0.7 1 23 1925 1947 1925 1948 0.95

21 23 0.19 15 7.2 0.0 1 23 1969 1991 1969 1991 0.98

22 23 0.036 2.8 9.4 0.6 1 23 1997 2020 1997 2020 0.95

23 23 0.00033 0.026 15.8 0.4 1 23 2028 2051 2028 2051 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.36	28	6.3	1.5	3	23	674	695	673	695	0.96
2	23	0.27	21	6.6	0.3	1	22	1083	1104	1083	1104	0.95
3	23	8.8	6.8e+02	1.9	0.3	1	22	1146	1167	1146	1169	0.82
4	23	0.24	18	6.8	0.6	3	21	1180	1198	1178	1199	0.94
5	23	1.4	1.1e+02	4.5	0.1	3	23	1208	1229	1206	1229	0.89
6	23	0.008	0.62	11.5	0.1	3	23	1250	1271	1248	1271	0.96
7	23	0.02	1.5	10.2	2.8	1	23	1277	1300	1277	1300	0.92
8	23	0.16	13	7.3	0.0	1	23	1326	1349	1326	1349	0.90
9	23	0.025	1.9	9.9	3.4	1	23	1354	1376	1354	1376	0.97
10	23	0.013	1	10.8	0.3	1	23	1382	1405	1382	1405	0.95
11	23	0.003	0.24	12.8	1.3	1	23	1418	1440	1418	1440	0.97
12	23	0.00081	0.063	14.6	2.0	1	23	1488	1511	1488	1511	0.97
13	23	0.0031	0.24	12.8	1.6	1	23	1571	1594	1571	1594	0.96
14	23	0.00071	0.055	14.8	2.1	2	23	1621	1643	1620	1643	0.96
15	23	0.11	8.8	7.8	0.1	2	23	1649	1671	1648	1671	0.93
16	23	0.013	1	10.8	0.2	1	21	1715	1735	1715	1736	0.95
17	23	0.0016	0.12	13.7	0.6	1	23	1746	1768	1746	1768	0.93
18	23	0.00015	0.011	16.9	0.3	2	23	1857	1879	1857	1879	0.93
19	23	4.4e-07	3.4e-05	24.9	1.4	3	23	1886	1906	1885	1906	0.98
20	23	0.006	0.46	11.9	0.7	1	23	1925	1947	1925	1948	0.95
21	23	0.19	15	7.2	0.0	1	23	1969	1991	1969	1991	0.98
22	23	0.036	2.8	9.4	0.6	1	23	1997	2020	1997	2020	0.95
23	23	0.00033	0.026	15.8	0.4	1	23	2028	2051	2028	2051	0.96

Sequence Information

Coding Sequence: atgaaTCTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAAGTGAATTACTGCCGATTTTtcctaccaccagttcggatgACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGgattgtgtgtctgttgagATAAACGAAAATGACGAACTGCCGGTGAATGTCTGCAAGAAATGCATGGACAATGTCAACAACTGGCATGTATTCAAGACTGTATGTGAAAGGACTCAGGACAAACTACAGTCCTTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGAGGTGAATATCAAAAGTGAACCATTGTCTGATGAGGCCTATGATGATGGAGTCACTATTGATGGATCATACCATTGTGAGAATGCGGGCTCTTCAAGCAAAGTACAGCCAGAAGGGCCACCGATCTTGGCTTCACTGGGGCTCACACCAAGGAGTGATAAGAAATATATAGATCCAAGAATGGATTGGCAACGGGTCCATGCAATCTTGGATATGGTTCAAGACGATGAAGTCATTGACTCACTGCAGTCAAATGAAGAGTGTGATGTACTTCACCACTCAGATCATGATTCTGATATGGAGGCTGATCTTCAACCTGATGTTGAAGAAGAATTCATTAACTGCAGCAATGGATATAAATGTATAAACAAGAAAATTATTTCAAAAGATCCTAAATTGTCAGTGTCACTCAATAATTTAAAGGTCAAAGAAGTATCCAGACTGAGAAAGCGCAAGGCTGATGTACGGAGAGATTGTCCTCGACCTAAAAATGCTTGGCAACTTTTGTTTACTGATGATCTACTAGAACTCATTGTGGCTTCGACAAATGATAATATAATTAAGAGTGGAAGAGGTTACTCTGATTCTACTAATGTAAGTGAAATAAAATCTCTTATTGGCATACTTTACTTGCACGGCATAATGAGGCCAACACATCAGAAAATTAAAGACCTCTGGAACAGTGACTGTGGTACACCTTGTGTAAGAAGTGCAATGAAATATGACCGCTTTAGGTTTCTCCTTCAACACATTAGTTTTGATAAAGAAGACGATGATAGCATTATACAGTATGATATTATGAGACGTATACGTAAAGTTTTTGAAATCTTCGCCATGAATTGTAGAACATCATTCGAAGTTGAGAATTATGCTGTGATTGATGAGATTATTGTGCCAGTATATGGGCCGTGCCCATTCCGATATGATATTGAAAAGAAGCCGTTGAAGCGTGGGTTAAAATTGGTTTTATTGGTTGATTCCTCGAATTTCTATGTGAGCAATGTTGATGTGATAACGGACCCATATTTTGGTGCAGATgagattgcaaaaaaaattactcaaCATCTGGCCGGATCTGGGAGGACTATCATTATGGATAGCTGGTTTACATCACGCTCCTTAATGGACAGTCTTAAGAGAGAATACCAGCTGTATACTATAGCAGCATTGAAACCGAACAATGACGACATACCACCTTTATTCCTTTCTCAGTACAGAAAATGTCGTATGTTTATGTCTGGATTTTTGGACACTGATGTCTCGCTGACTTCTTACGTTACTTCTGATTCAAAATCTATTAATGTACTCACTAATGAGCCAAAGTACTATAAGAAAGGTCATATAAACCGTACTACAGTTGTGTCTGTGTTTCAGAAAAATCAGTCTGTAGTTGAAGTGACTGATGTACTCATGCATTACTATACTACTATGCAGCATACAAATGATTGGACGCTGTCATTGTTTTTTACATTGCTTAATATTGCCTCGGTAAATGCTCAGGTTTTGTGGAGCTCACATAATTCTACAAATGTGGTACAACGTCGTTTATTTATCAAGGAATTGGGAGGAGTGGAAAGTGAGAAAGACGAAGAAGAGGATGAAGAAATGAATGAGCCCATACAGTCATACACGAAAGTTCCCAACATGCCAGAGGTGTCTATCACAGTGATGCGCCCCTCAGGCGAGACCCTGCACGCTCGTCAAGGTATTCAACAGCTAGCGTCCAAAGATTGTCTCGTCTGCGCCCGCACTTACAGATATTCCCACAACGCTAGGCGACACGAGCTCACCTCTCACAGCTTCGACAGGTACaccaacaaaataataaacaaaaagtcACGTACTCATATGCAACCGAAATTGAGACCTAACCCTTTCAATCCCAAGTCTCGACTAATGCCCAACCCTATTAGCCACAAAATGCAGTTCATGCCGAAAATAATtcctaccaaaataatgcaGCACAAAATTATCGCCCCACCTAAACCTATTCCTATAAAATCATCGAAAATCCAACAAAATAATTTGCCTTATCCATTGCGTATCAAAGCACTCAAAGACCTTCAAATTAAGAAAAAAGAGCCACAGATTTTGAAAACCCTTCTCACATCAAAACCAGAGATCTTGGTTTCGGAACCTGAGATAGTTAACTCTGGCCCAGAGAGTCCTGAAACATTAATTTCCGAGCCTGAAATTGCGTCTTTCCAAGTAGAAGCTATCCTTTCTGAACCTGATGGTTACGAACCACAAGGCGAGGATGAAATGGATGGTGAAATGCAAAACAATCAAAGTCATCAATATGATACTGTTGATATGGAATCTGATAATGAAATTGAAATAGCGCGACAACAAGGCAATGATGATTGTGGTGAAAATGATGATCAAAATGATGCAGAAGAAAATACTCTACAAGACGATGAAAACAATATGGATGGAGCCCAAAGTGATACTGAAAGAGATCACAATGAGGACACGGCTGAGAGTCAAGAACACATGGACGATGATAACAATGCTGAACTAAAAGTTGATGATGAGGATAGGGATGGCGAAGAAGGCAACGAGGATAGAGAACAGAGAGAGGATGAGGAACAACAGATGAATAACGAAGAAAAcgatgaagatgatgatgatgacctgcCTCCACTTGATATTGCTCCAGTTGTTGAGATAAATGAAGATTTGCAGGTTAACTCGCTTAACACCGAGATAAATGATGAAGAAGAGGAAGAGGAACTTGATGAAACGGTAGATCCTAACGATACTGTCGATGCTGACGCAGGAAAAGTACTAGACCCTGACAAATTATATGTTACTAAGACTCAAAGAGACTTTATCCACAAGTATCGTGACATCATTCAACAGATTAATACTAAACGATGTCTTTGCTGTGACAAAGAGCACCCGCGCAGAAAAGCCGTCATACAACATTTACAGAAAAATGGACACAAGGTTCCGAAGCACACGTGCTATAATTGTGTAATTACTTTTGGACACATTGGTGCTTTACTCAGCCATATGAGGTCAAACTCTTGTACAGACCTGTGGAAAATAATTTTTGAAGAGAATGGAATAACTGATGATTTAGTTCTCGAAGACGAGCCAAAAGATCCTAAAGTACAATACAAAGACATATTTAACGCTAGGTCGTATGCTTGCAAATTGTGTCCGGCTAAATTCCAACTCAAACAATTTATAATGAAGCACGTTTTGGATGTTCATGAAGATGGACAGTCGAGAGTACCACTCGCATGTGTGCATTGTCGTGCTAGATATAAAGATAAAAGTATATTGAAGAAACACATTCGTAACGGTGAATGTACAGTTTACATCGCTTGCGACTTATGTTCGGAAAAGTTTAACAACGTGCAAACTTTCAATGATCACGCTCTAGCGCTTCATGCCGGCAGTTTCGACCAGTCTGATAATCAAAGTAAATGCGTCGATGGTCGTCCTACAGATTGTCCAATATGTGGAAAGAAGAATACTAGTTACCCGAATTTGGTAAAACATTTGAaaattattcataatgaagaAAAACCTCATTATTGTCAACATTGTGATTCCAAATTCGAGCAAACTGGTGATCTTAACAAACACATATATGCTGAACACTCTGACAGAGCTTTGGGAATGCAACCAACGGAACCCGACATGTCTCTTGTCAAAGAAGAAGCTGAAGAGTACCACTATTCGTGTACAGAATGTAATGCTATATTTGAGACCGTCGATGCATGGACAGATCACCAGGTGGCCGAACATAATCAAGTGGCTCATCATTGTGATCAGTGTGAGAAGAAATTCTTGCGCCCATCGGAACTCGCTGAACATAAGAATACTCATTTGCGTGTTAAATTCTATCCTTGCAGTATCTGTACTAATTCGTACAGCACTCCTCAAAAACTAAGCGAGCATGTGCAGCAAAATCATCCTGGTGCCGGAGCTCACGCATCAGCAGAGACCGAATTTTTCTGCGATATTTGCATCAGATCATTTAAAAGTCGTCAAGCTTACTCCAATCATATGCGTATACACGCTAAAGTACCCACCACTAATAGAAAACCGGGAGAAAAAGGATTCCCCCCGCAAATTATCGGTAAACCGATCAAACAGTTTGCTATGGTTCAACCTGGTATTGTCTCATTTAATCCAAGTTACAATGTTCCTAATGCTCCATATTCCTGTGACTTATGTGGTAAAGGTTTTATGCACAAGAAAAATATTTGGAAACATAAGAAAGTGCTGCATGCTGATATTCTGAACGATAGAAATGATAGTGAAGAGAATACTATGCAAGCTTCAACTGAAGATGATGATTACAATGTTGATGAAAATGGCGCACTACTGTCAACGCCACAATTTAACAGTTTCAATTTCACTAATTTCACGAATAATGTGCAACAAACGCCACAGGATCCAATGCCGTTCTCATGTGAAATATGTTTCAAAAAATTCCCGCTTAGAACTAGTTTGTGGAAACATAAACGCGCTAAACATGGAATCATTAATGCCAGCGCAGGAGGCAGCAATGAAACCCAAACCCACTCGGCTTCCGGAGAGAATAGTAGTAGGTCGAGTTGTACTATCTGTAGAATATCATTCTCAGACAAGAAGTCATATTACAGACATAGAAAGACTGTTCACAAATCTTCTGTACAAATGTGTAAAATATGTGGAAAACCTCTCAACTCTACATTAGAGCTCTACGAGCATCTCAAAGCTGCTCATGCTCGAGAGTTACTGGGCTATAATGACAATCAAACCCCAAGTAAGTCACAAGAAATAACTCCAGAGTTGGAGGTAGACTATGATAATGACCAAGAGTCTATTGATCCTAGCGTGGATTATCAAGCTCGTTATCCTTGCGATACTTGTGGCAAGCAATTTGTTGGTTTGCTCGCGTTGCAGAACCATCAGTGCATAAATCAGAATTCCTCGCAGCCACAAACATTCGACTGTGAAATTTGCCACAAGAGCTACACATCTATAGCTGCATTAAAAAGTCATCGCGGTTGGCATTTGCGGTCCCCTGATGGTAAAGCTGCTGCAAACAACAGTGGACTTTGGATGCCCCAGCACAAAGTGACGAGCAAAGTAAGCAAGCACGAAGTCGTTGACCCCGTGCAACTGGCGAAGGTTCAACATTCGGCACCCGCTGCTGCCGTAGTGAAAAGAAGACTACCACCAGAGGTTGAAGTGACAGTTGTTAATCCTAACAAAAAGATGCGTTCCGACGATTCTATCGAATTCGATCCACTGGGTTCTGGCCCGCTAGAGGATAGATATTGTACCATCTGTGACAAAGAATTTACCAAACGCGCGGCTTACCAACGCCATATGGATGAGGTGCACCAACCGAACTCTGTATTTTGTCCGGTATGCGATAAGAGTTTTACAAGGAAATCAACTCTTCTCGTTCACATGAAGAAGCATTATGAAAGTGGAGAGAGCAGTTCAGCTGCAGTCGCACAACTAGAAGAGGATGATTTCTCTTGTGATTTATGTGGCGCCCAGTACGATAACGCTAAAGCTTTGAGGTCACATCGAGCGAAACATCACGGGGAAGAGTCGGGGGATTCTGATGATGACGGCAGCGTCCCCATTGCTCAGCCTGGCGAGTTCACGTGCGCACAATGTGGGGACGGAGTGGCCACCCCTCGCGATTTGATCGCTCATCGGTCCATGCACGCTACCCCTACTAAATTCTTCTGTAATATATGCAAGGTGTATTTCGCGCGTGCTCTTGATTTGTCATCGCACACCCGGGCGAGACACGCTGACAACGAAAAGGTTTTCTTCCCGTGTGCCATGTGCGACCGGTTCTACATGAACAAGAAGAGTTTACAGCGGCACATTGAAATGGCTCACTGA
Protein Sequence: MNLNYDRVCRLCLSSRSELLPIFPTTSSDDSEPPVLALKIKDCVSVEINENDELPVNVCKKCMDNVNNWHVFKTVCERTQDKLQSLIKKDGSQLEEEVNIKSEPLSDEAYDDGVTIDGSYHCENAGSSSKVQPEGPPILASLGLTPRSDKKYIDPRMDWQRVHAILDMVQDDEVIDSLQSNEECDVLHHSDHDSDMEADLQPDVEEEFINCSNGYKCINKKIISKDPKLSVSLNNLKVKEVSRLRKRKADVRRDCPRPKNAWQLLFTDDLLELIVASTNDNIIKSGRGYSDSTNVSEIKSLIGILYLHGIMRPTHQKIKDLWNSDCGTPCVRSAMKYDRFRFLLQHISFDKEDDDSIIQYDIMRRIRKVFEIFAMNCRTSFEVENYAVIDEIIVPVYGPCPFRYDIEKKPLKRGLKLVLLVDSSNFYVSNVDVITDPYFGADEIAKKITQHLAGSGRTIIMDSWFTSRSLMDSLKREYQLYTIAALKPNNDDIPPLFLSQYRKCRMFMSGFLDTDVSLTSYVTSDSKSINVLTNEPKYYKKGHINRTTVVSVFQKNQSVVEVTDVLMHYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWSSHNSTNVVQRRLFIKELGGVESEKDEEEDEEMNEPIQSYTKVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCARTYRYSHNARRHELTSHSFDRYTNKIINKKSRTHMQPKLRPNPFNPKSRLMPNPISHKMQFMPKIIPTKIMQHKIIAPPKPIPIKSSKIQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEILVSEPEIVNSGPESPETLISEPEIASFQVEAILSEPDGYEPQGEDEMDGEMQNNQSHQYDTVDMESDNEIEIARQQGNDDCGENDDQNDAEENTLQDDENNMDGAQSDTERDHNEDTAESQEHMDDDNNAELKVDDEDRDGEEGNEDREQREDEEQQMNNEENDEDDDDDLPPLDIAPVVEINEDLQVNSLNTEINDEEEEEELDETVDPNDTVDADAGKVLDPDKLYVTKTQRDFIHKYRDIIQQINTKRCLCCDKEHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIFEENGITDDLVLEDEPKDPKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPLACVHCRARYKDKSILKKHIRNGECTVYIACDLCSEKFNNVQTFNDHALALHAGSFDQSDNQSKCVDGRPTDCPICGKKNTSYPNLVKHLKIIHNEEKPHYCQHCDSKFEQTGDLNKHIYAEHSDRALGMQPTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPQKLSEHVQQNHPGAGAHASAETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEKGFPPQIIGKPIKQFAMVQPGIVSFNPSYNVPNAPYSCDLCGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEDDDYNVDENGALLSTPQFNSFNFTNFTNNVQQTPQDPMPFSCEICFKKFPLRTSLWKHKRAKHGIINASAGGSNETQTHSASGENSSRSSCTICRISFSDKKSYYRHRKTVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNDNQTPSKSQEITPELEVDYDNDQESIDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQNSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPVQLAKVQHSAPAAAVVKRRLPPEVEVTVVNPNKKMRSDDSIEFDPLGSGPLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGESSSAAVAQLEEDDFSCDLCGAQYDNAKALRSHRAKHHGEESGDSDDDGSVPIAQPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00007331; iTF_01416093; iTF_01083559; iTF_01437291; iTF_01417045;
80% Identity: -