Cnup026207.2
Basic Information
- Insect
- Catocala nupta
- Gene Symbol
- -
- Assembly
- GCA_963675205.1
- Location
- OY776090.1:21585403-21594299[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0066 1.2 11.5 1.1 3 23 749 770 748 770 0.96 2 23 0.25 43 6.6 0.3 1 22 1152 1173 1152 1173 0.95 3 23 7.8 1.4e+03 1.9 0.2 1 22 1215 1236 1215 1238 0.82 4 23 0.0025 0.44 12.9 2.1 3 22 1249 1268 1249 1268 0.96 5 23 0.95 1.7e+02 4.7 0.0 3 23 1277 1298 1275 1298 0.90 6 23 0.021 3.6 10.0 0.2 3 23 1318 1339 1316 1339 0.96 7 23 0.0022 0.39 13.0 2.5 1 23 1345 1368 1345 1368 0.95 8 23 0.15 26 7.3 0.0 1 23 1394 1417 1394 1417 0.90 9 23 0.0065 1.1 11.6 3.5 1 23 1422 1444 1422 1444 0.97 10 23 0.092 16 7.9 0.1 1 23 1450 1473 1450 1473 0.95 11 23 0.0027 0.48 12.7 1.3 1 23 1486 1508 1486 1508 0.97 12 23 0.00021 0.037 16.2 1.8 1 23 1560 1583 1560 1583 0.97 13 23 0.0056 0.99 11.7 1.7 1 23 1643 1666 1643 1666 0.96 14 23 0.0028 0.49 12.7 2.1 2 23 1693 1715 1692 1715 0.95 15 23 0.1 18 7.8 0.1 2 23 1721 1743 1720 1743 0.93 16 23 0.012 2 10.8 0.2 1 21 1787 1807 1787 1808 0.95 17 23 0.00049 0.087 15.1 1.0 1 23 1818 1840 1818 1840 0.93 18 23 0.00013 0.023 16.9 0.3 2 23 1930 1952 1930 1952 0.93 19 23 4.7e-07 8.2e-05 24.6 1.4 3 23 1959 1979 1958 1979 0.98 20 23 0.05 8.7 8.8 0.8 1 23 1998 2020 1998 2021 0.94 21 23 7.9 1.4e+03 1.8 0.1 1 23 2045 2067 2045 2067 0.88 22 23 0.032 5.7 9.4 0.6 1 23 2073 2096 2073 2096 0.95 23 23 0.0003 0.053 15.8 0.4 1 23 2104 2127 2104 2127 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTTGGATGACTCGGAACCTCCCGTCCTCGCTTCGAAAATCAAGGATTGTGTGTCTGTACAGATAAACGAAAATGACGACCTGCCCACGAATGTCTGTAGGAAATGCATGGACAATGTCAATAATtggcatatatttaaaaatgtttgtgaaaGGACACAAAACAAACTACAGTCTCTGTTTAGTAAAGATGGCAGCCAACTAGAAGAGGTAAAAATAAAGAGTGAACCCTTATCTGATGAAGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGACACTGAGAATGCCGGTATGGCAAGCAAAGTCCAGCCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACGCCAAGGAGTGATAAGAATTGTGTGGATCCTCGAATGGATTGGCACCGGGTCCATGCAATCTTGGACATGGTTCAAGACAATGAAGTGATTGACTCGCTGCAGTCAAAAGAGGAGCGTGATGTTTTGCAGCACTCGGATCATTACTCTGACACAGAGGCCGAACTCCATCCCGAAATTGATGATGATTATATAGATTCCAAACATAGTTACATATGCAAAAACAAAAAGGTTATATCGAAAAATCCAAAACTGACACCATCCATGAATAACATCAAGATCAGAGAAGCGCTTGAACTTCGCAAGCAAAAACCGGACATTCCAAAACAGCATTTGCCACGACCTAAAAATGCATGGCAGTTATTATTTACCGATGACTTGCTGGAATTGATTGTCACTTCTACTAATGAAAATATAGTACGAAATGAAAATGGCAATGCAGTTGCTACCAATGTCAGCGAAATAAAAACGCTTATTGGCATTTTGTATTTGCACGGCATAATGCGGCCGACGCATCAGAAATGTAATGACCTTTGGCACAATGAATGTGGTGTACCTTGCATTAGAAATGCCATGACATATGAAAGGTTTAAATTTCTCCTACAAAACATAAGTTTCGATAAAGACGACGACGATAGTATTATACAGTTCGACATTATGAAACGTATGCGTAAAGTATTCGAAATCTTCGCCCTGAATTGTAGAACAGCTCACGAGATTGAAAACGTTGCTGTTATTGATGAGATCATCGTGCCAGTTTATGGACCTTGCCCATTTCGATATGATATTGATAAGAAACCGCTAAAGCGCGGGATAAAAATGGTATTGCTCGTCGATTCATCCACATTCTATATGAGCAATCTAGATGTCATTACTGACCCCTACTTCGGAGCCGTAGAGATAACGAAAAAGTTAGTTCAGCATTTAGCTGGAACGGCAAGAATTATTGTTATGGATAGTTGGTTTACATCTTCTTCGTTGATGAAAAGTCTCAAGAATGAGTACCAGCTATTTACTATAGCTGCATTAAGCCCGAACAATGACTGGATTCCACCATTGTTTCTTTCTCAGTATAGAAAGTGTAGAACATTCATGTCTGGATTTGTTGATAATGAAATTTCAATAATGTCTTACGTGAATTCTGAATCAAAATCgataaatgtaataacaaaTCATCCGAAATTTTATAGAAAAGGTCATATAAACCAAACGACTGTTGTGTCTGTTTATAAGAAGAACCAGTCTGCTGTTGAAGTTATTGATGTTCTTATGAATTACTACACAACCATGCAGCATACTAATGACTGGACATTGTCCTTATTCTTTACATTATTGAACATTGCTACAGTTAATGCACAAGTGCTATGGAGTTCCCAAAATTCCAATGTGGCTCAGCGtcgcctatttatcaaggaattGGCTTTAAGCCTATTGTTGCCAGATGAAAGAATGTCCATATCTCCAATAAAATTGAGTGACATAGAAGGCAGAAAGCAAAGCATATCTATGTTTCGTGAAATTGCACAGCCATATTACAAAAACAGGAGACGGTGTAGAATATGTGTTAAGACAACGAAACGGGATCGGAGAACGAAGCAATTCTGTATGAAGTGTGGTCAACCATTTTGCAAAGAACATTCTGGTGTGGAGAGTGACAAAGAGGAAGAAGAGGATGATGACGAAGAGTTGACAGAAGCTCCTCAACCATTCCCGAAAATGCCACACATGCCAGAGGTCTCCATAACCGTGATGCGTCCAACCGGTGAAACCTTACATGCCCGTCAAGGTATCCACCAACTCGCTTCTAAAGACTGCCTTGTATGCGGCCGCACATACAGATACTCCCACAATGCCCGCCGACATGAATTGACCGCTCATAGCTTCGATAGATACACCAACAAGATAACTCCCAAGAAGTCACTCACACATCTCCAACCAAAACTGAGACCTAACCCGTTCAACCCTAAAGCGCGGCTAATGCCGAATCCTATTAGTcataaaatgcaatttatgtccAAAAATATCCCAACGAAAGTCGTACCCATCAGCAAAGTGATAACCCCCCAGAAGCCCATACCAATTAAGTCTGCGAAAGCTCCACAAAATAATTTACCTTACCCACTCCGGATCAAGGCACTAAAagatttacaaataaagaaaaaggagCCTCAAATATTGAAAACATTGTTGACCTCTAAACCTGAAGTTCTTGTATCGGAACCTGAGATACTAAATTCTGGGCCTGAAAGTCCGGAGACACTCATATCAGAACCAGAGATTGCTTCGTTTCAAGTGGAAGCAATACTTTCGGAGCCCGATGCCGATGGCTACGACCAGCATCCGGGCGATGAAGAAGTTGACAACGAATTGCATAATAACCAAAGCCAGAACTATGATACGGTCGACATGAATTCTGAAAATGAAATCGAGATCGCTCGACAACAAAGCAATGACAACGGCGAGGGTGATGACCAAGGGGATTGTGATGAACAACTAGACCAAGATGATGATAACATGGATGGTGCTCAAAGCGACAACGATCAAGATGCCGCTGACGATACAACAGAAAGTCAAGACATGGTCATAGATGAAGGGCTCGAAATTAAGGCTGAACACGACTTGAAGGAAAATGAGGAAACCCAAGAGGAAAGGGAGCCCGAAGAAATAGAAATGAATCATGAAGAGAACGATGACGACGAAGATGATGACCTGCCGATATCAATACAGCCAGTCGTTGAAATCAACGAGGACTTACAGGTCAACTCATTTAATAATGAAGCACCAGAGGAAGAGGAAATGGATGAGACTGCTGACCCTAATGAGACTGTCGAGGAAGAAGAGGTCAAAGAACTTGACCCCAATAAAACCTATGTCACAAAAACACAACGGGACTTCATTCTGAAGTATCGGGATATTATTCAGCAAATCAATACTAAACGCTGCTTGTGTTGCGACAGAGAACATCCGCGCAGAAAAGCCGTTATTCAACACTTGCAGAAAAATGGACACAAGGTTCCAAAACATACGTGTTATAATTGCGTAATCACGTTCGGACATATTGGCGCGCTTCTTAGCCATATGAGGTCGAATTCCTGTACCAATTTGTGGAAGATTATATACAACGAAAATGGTATCACTGATGATTTAGTTTTAGAAGACGAACCCAAGGAGGTCAAGGTTCAATACAAAGATATTTTCAATGCTAGATCCTATGCTTGCAAGCTTTGCCCTGCTAAATTCCAATTGaaacaatttattatgaaaCATGTTTTAGACGCGCACGAAGATGGACAATCAAGAGTTCCACTCGGCTGTGTTCATTGTCGCGCAAGGTTCAAAGACAAAAGTTTACTAAAGAAGCATATTCGTAAAGGCGATTGTACTGTGTATGTAGCTTGCGATTTGTGTCCTGAACAATTTGTGAACATGCAAGACTTTAATGATCACGCCTTAGCTATTCATGCCGGCAACTTCGAGTCAGATAGTCAAAGCAAATGTGTTGACGGTCGTCCTACTGACTGTCCGCTGTGCGGCAAGAAAAATAGCAGCTATCCGAATTTAGTGAAACATTTGAAAATTATTCACAACGAGGAGAAGCCTCACTACTGTCAGCATTGTGATTCTAAATTCGAACAAGCTGCTGATCTCAACAAACACATTTACATGGAACATTCTGACAGGACGTTGGGCATGTCGAATAACGAACCTGATATGTCAATTGTTAAGGAAGAAGCAGAGGAATATCATTATTCTTGTACAGAATGTAACGCTATATTCGAAACGGTCGATGCGTGGACGGACCATCAAGTGGCTGAACATAACCAAGTGGCGCACCACTGCGACCAGTGCGATAAGAAATTCTTGCGTCCTTCCGAACTCGCGGAGCACAAGAATACTCACCTAAGGGTTAAGTTCTATCCCTGTAGCGTTTGTGCGAATTCCTACAGTACTCCACAGAAATTGTCTGAACATGTTCAACAAGTTCACCCGGGCGTTGGCGCACTTGCCGCAGCTGATTCAGAATTCTTCTGCGACATCTGTATCAGGTCATTCAAAAGCCGCCAAGCTTACTCCAACCATATGCGTATACATGCTAAAGTACCTACTACAAATAGAAAACCGGGTGAAACGACTAGCAAAGGCTTTTCGCCCTCAATTATTGGTAAGCCCATTAAACAGGTATACCCTATGGTTCAACCGGGTTTCGTCTCATTTAAGCCACATTACAATATTCCTAATGCTCCATATTCATGTGATATATGCGGCAAAGGTTTCATGCATAAGAAGAACATTTGGAAACATAAAAAGGTATTGCACGCTGATATCCTAAACGATAGAAACGATAGCGAGGAAAATACCATGCAAGCATCCACCGAGGAAGATGAGTTCAATCCAGATGAAAATGGCGCTGTCCTTACAACGCCACAATTTAATAGTTTCAACTTTACTAACTTCCCTAACAATGTCCAACAACCTCAACAAGACACGATGCCTTATTCGTGTGAATTATGTTTCAAACGATTTCCGCTTAGAACTAGTTTGTGGAAACATAAACGTGCTAAACACGGAATTGTTAACCCTAACTCCAGCGGCAGCAACGAGACTCAAACCCCATCGGCAAGTGGTGAAGGTAGTAGTAGATCTAGTTGCACTATATGCAGAATAACATTTTCAGATAAGAAATCTTACTATCGTCATCGAAAGAACGTCCATAAGTCTACAGTACAAATGTGTAAAATATGTGGTAAACCTCTAAATTCGACTTTAGAACTGTACGAGCATTTAAAAGCAGCACATGCTAGAGAACTGCTGGGTTACAATGCTAATCAAGGTTCTAGTAAATCTCAAGAAGTAGCCCAAGAATTGGAGGCTGATTATGAGAACGACCAGGAGTCGGCGGACCCTAGCGTCGATTATCAGGCGCGTTACCCTTGCGACACGTGTGGTAAACAATTCGTCGGGTTGTTAGCTTTGCAGAACCATCAATGCATAAACCAGGCACCGCCACAACCACAAACTTTCGATTGTGAGATCTGTCACAAGAGTTATACGTCAATATCGGCGCTAAAGAGCCATCGTGGTTGGCATTTACGTTCACCAGATGGTAAAGCGGCCGCTAATAATAGCGGTCTTTGGATGCCCCAACACAAGGTTACGagtaaaataagtaaacatGAAGTCATCGATCCCACACAACTAGCTAGGGTGTCGCATCCTAGTCCCGCTGCTACAGTAGCAGCTAAAAGGAGACTGCCACCAGAGGTCGAGGTCACGGTTGTTAATCCAAATAAGAAAATGCGCTCCGACGATTCCGTTGAACTGGAACAACAAAACTCTAGTTCAGCCGAGGACAGGTACTGCACAATTTGTGATAAGGAGTTCACTAAACGAGCGGCGTACCAACGCCACATGGATGAAGTACATCAACCAAATTCTGTTTTTTGTCCGGTTTGTGATAAGAGCTTTACTAGAAAGTCAACATTACTTATCCACATGAAAAAACATTACGAGAGTGGTGAAGGTAGTTCAACTACAGCCGGTCAAGGTGAGGATGATATGCATAGTTGTGACTTATGCGGAGCGCAGTATGATGACGAACAAGCGCTCAGAGCTCACAGAGTCAGACATCACGGGGAGGAAGAGTCTGATGAAGAGGATGACGGCGACGACGGTAACGTACCTGTTCCCCCACCGGGAGAGTTCACGTGCAGTCAATGTGGAGATGGCGTAGCTACACCTAGGGACCTGATCTTTCACCGCACAATGCATGCTACTCCCACCAAGTTCTTCTGCAACATTTGCAAAGTGTACTTCGCGAGGGCATTGGACCTGTCGTCCCACACGAGGGCGAGACACGCCGACAATGACAAAGTGTTCTTTCCTTGTGCCATGTGCGATAGATTCTACATGAACAAAAAGAGTTTGCAGCGACACATTGAGATGGCTCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSLDDSEPPVLASKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHIFKNVCERTQNKLQSLFSKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPDTENAGMASKVQPEGPPILASLGLTPRSDKNCVDPRMDWHRVHAILDMVQDNEVIDSLQSKEERDVLQHSDHYSDTEAELHPEIDDDYIDSKHSYICKNKKVISKNPKLTPSMNNIKIREALELRKQKPDIPKQHLPRPKNAWQLLFTDDLLELIVTSTNENIVRNENGNAVATNVSEIKTLIGILYLHGIMRPTHQKCNDLWHNECGVPCIRNAMTYERFKFLLQNISFDKDDDDSIIQFDIMKRMRKVFEIFALNCRTAHEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAVEITKKLVQHLAGTARIIVMDSWFTSSSLMKSLKNEYQLFTIAALSPNNDWIPPLFLSQYRKCRTFMSGFVDNEISIMSYVNSESKSINVITNHPKFYRKGHINQTTVVSVYKKNQSAVEVIDVLMNYYTTMQHTNDWTLSLFFTLLNIATVNAQVLWSSQNSNVAQRRLFIKELALSLLLPDERMSISPIKLSDIEGRKQSISMFREIAQPYYKNRRRCRICVKTTKRDRRTKQFCMKCGQPFCKEHSGVESDKEEEEDDDEELTEAPQPFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKSLTHLQPKLRPNPFNPKARLMPNPISHKMQFMSKNIPTKVVPISKVITPQKPIPIKSAKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDADGYDQHPGDEEVDNELHNNQSQNYDTVDMNSENEIEIARQQSNDNGEGDDQGDCDEQLDQDDDNMDGAQSDNDQDAADDTTESQDMVIDEGLEIKAEHDLKENEETQEEREPEEIEMNHEENDDDEDDDLPISIQPVVEINEDLQVNSFNNEAPEEEEMDETADPNETVEEEEVKELDPNKTYVTKTQRDFILKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLGCVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPEQFVNMQDFNDHALAIHAGNFESDSQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMSNNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQVHPGVGALAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGETTSKGFSPSIIGKPIKQVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEEDEFNPDENGAVLTTPQFNSFNFTNFPNNVQQPQQDTMPYSCELCFKRFPLRTSLWKHKRAKHGIVNPNSSGSNETQTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQEVAQELEADYENDQESADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQAPPQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPTQLARVSHPSPAATVAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSSAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSTTAGQGEDDMHSCDLCGAQYDDEQALRAHRVRHHGEEESDEEDDGDDGNVPVPPPGEFTCSQCGDGVATPRDLIFHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00017541;
- 90% Identity
- iTF_00282639;
- 80% Identity
- -