Basic Information

Insect: Mythimna lalbum
Gene Symbol: -
Assembly: GCA_949319445.1
Location: OX439353.1:7799896-7809118[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.011 1.1 10.9 1.6 3 23 650 671 649 671 0.96

2 22 0.24 24 6.7 0.3 1 22 1060 1081 1060 1081 0.95

3 22 0.004 0.39 12.2 4.0 2 22 1156 1176 1155 1176 0.93

4 22 0.11 10 7.8 0.1 2 23 1184 1206 1183 1206 0.89

5 22 0.02 2 10.0 0.2 3 23 1227 1248 1225 1248 0.96

6 22 0.0012 0.12 13.9 3.4 1 23 1254 1277 1254 1277 0.95

7 22 0.14 14 7.3 0.0 1 23 1303 1326 1303 1326 0.90

8 22 0.022 2.1 9.9 3.4 1 23 1331 1353 1331 1353 0.97

9 22 0.01 0.97 11.0 0.2 1 23 1359 1382 1359 1382 0.95

10 22 0.0046 0.45 12.1 0.8 1 23 1395 1417 1395 1417 0.97

11 22 0.0002 0.02 16.3 1.8 1 23 1467 1490 1467 1490 0.97

12 22 0.0025 0.24 12.9 1.9 1 23 1549 1572 1549 1572 0.96

13 22 0.0027 0.27 12.8 2.1 2 23 1600 1622 1599 1622 0.95

14 22 0.046 4.5 8.9 0.1 2 23 1628 1650 1627 1650 0.94

15 22 0.011 1.1 10.8 0.2 1 21 1694 1714 1694 1715 0.95

16 22 0.00048 0.047 15.1 1.0 1 23 1725 1747 1725 1747 0.93

17 22 0.00013 0.013 16.9 0.3 2 23 1840 1862 1840 1862 0.93

18 22 4.6e-07 4.5e-05 24.7 1.4 3 23 1869 1889 1868 1889 0.98

19 22 0.046 4.5 8.9 0.4 1 23 1907 1929 1907 1930 0.95

20 22 0.21 21 6.8 0.0 1 23 1953 1975 1953 1975 0.97

21 22 0.032 3.1 9.4 0.6 1 23 1981 2004 1981 2004 0.95

22 22 0.00031 0.03 15.8 0.4 1 23 2012 2035 2012 2035 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.011	1.1	10.9	1.6	3	23	650	671	649	671	0.96
2	22	0.24	24	6.7	0.3	1	22	1060	1081	1060	1081	0.95
3	22	0.004	0.39	12.2	4.0	2	22	1156	1176	1155	1176	0.93
4	22	0.11	10	7.8	0.1	2	23	1184	1206	1183	1206	0.89
5	22	0.02	2	10.0	0.2	3	23	1227	1248	1225	1248	0.96
6	22	0.0012	0.12	13.9	3.4	1	23	1254	1277	1254	1277	0.95
7	22	0.14	14	7.3	0.0	1	23	1303	1326	1303	1326	0.90
8	22	0.022	2.1	9.9	3.4	1	23	1331	1353	1331	1353	0.97
9	22	0.01	0.97	11.0	0.2	1	23	1359	1382	1359	1382	0.95
10	22	0.0046	0.45	12.1	0.8	1	23	1395	1417	1395	1417	0.97
11	22	0.0002	0.02	16.3	1.8	1	23	1467	1490	1467	1490	0.97
12	22	0.0025	0.24	12.9	1.9	1	23	1549	1572	1549	1572	0.96
13	22	0.0027	0.27	12.8	2.1	2	23	1600	1622	1599	1622	0.95
14	22	0.046	4.5	8.9	0.1	2	23	1628	1650	1627	1650	0.94
15	22	0.011	1.1	10.8	0.2	1	21	1694	1714	1694	1715	0.95
16	22	0.00048	0.047	15.1	1.0	1	23	1725	1747	1725	1747	0.93
17	22	0.00013	0.013	16.9	0.3	2	23	1840	1862	1840	1862	0.93
18	22	4.6e-07	4.5e-05	24.7	1.4	3	23	1869	1889	1868	1889	0.98
19	22	0.046	4.5	8.9	0.4	1	23	1907	1929	1907	1930	0.95
20	22	0.21	21	6.8	0.0	1	23	1953	1975	1953	1975	0.97
21	22	0.032	3.1	9.4	0.6	1	23	1981	2004	1981	2004	0.95
22	22	0.00031	0.03	15.8	0.4	1	23	2012	2035	2012	2035	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTAGAGATAAACGAAAATGACGACCTGCCCACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCAGGTTTTTAAAAACGTATGTGAAAGGACACAAAACAAACTACTGTCTCTGAAAGATGGCAGCCAACTAGAAGAGgtgaaaataaaaagtgaaccaCTGTCTGATGAAGCTTATGATGATGGAGTGGTCATTGATGGGTCATATCCTGTCATTGAGAATGCTGCCTTTTCAAACAAAGTACAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGATCCACGAATGGATTGGCATCGGGTCCATGCAATATTGGACATGGTTCAAGACAATGAGGTAATTGACTCCCTGCAGACGAAGGAAGAGTGTGACGTTTTGCAGCAATCTGACCATGACTCTGATTCAGAAGCCGAACTCCTGCCAGAAATAGACGATGATTACGTTGATTGCAAAAGCGGTTAcataagcaaaaataaaaaaataatatcaaaagcTCCAAAACTATCAACATCAGCAAATAATGTCAGAATGAAAGAAGCATTTAAACTCAGAAAACGTAAACTGGATGTCCGTAAACATTGTTCACGACCTAAAAATGCGTGGCAGCTGTTATTCACCGATGACCTACTAGAATTGATTGTCTCTTCAACTAATGACAATATTGTGACAAATGGGAAAAGTTTCTCGCAGTCTACTAGCGTCAGCGAAATCAAAGCGCTTATCGCTATTCTGTATCTGCACGGCATAATGCGACCGACGCATCAGAAATCTGCTGACCTTTGGAACAGCGACTGTGGCGTTCCTTGCATCAAGAACATCATGAAATATGAAAGGTTCAAATTCTTGCTTCAAAATATGAGTTTCGATAAAGAGGATGACGACAGCATTATACAGTTCGACATAATGAAGCGTATGCGTAAAGTGTTCGAGATCTTCGCAATGAATTGCAGAACATCTCATGAGATCGAGAATGTCGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATAGATAAGAAGCCGCTGAAGCGGGGAATGAAAATGGTTTTGCTAGTTGATTCATCCACATTCTACGTGAGCAATTTAGATGTCATAACTGATCCTTATTTTGGCGCCGAAGAAATAACCAAAAAGTTGGTTCAGCATTTAGCTGGAACGGGCAGATCCATCGTCATGGACAGTTGGTTTACATCTTTCTCATTAATGGACAACCTTAAAAATGAGTACCAGTTATATTCTATTGCAGCTCTTAACCCAAATAGCGAAGTCATCCCACCACTATTCTTGTCTCAATACAGGAAAACTCGGACATTCATGTCTGGGTTCATTGATGATGAAGTATCATTGACATCTTATGTCAACGCTGAGGGGAAATCCGTAAATGTGTTATCAAACGAGCCTAGATATTACAGGAAAGGTCATATAAATCACACTACAGTTGTATCAGTGTATAAGAAGACTCAGTCTGCTGTCGAAGTGGTGGATGTTCTCATGAATTACTACACTACAATGCAACATACAAATGATTGGACATTGTCTTTGTTCTTCACATTGCTGAATATTGCATCTGTGAACGCTCAAGGTGCAGAAAGTGAAAACAATGAAGAAGACGAGGAAGAAGTGAATGAGCCCGCACAAAAGTTCCCTAAAATGCCCCACATGCCCGAGGTGTCCATCACGGTCATGAGGCCAACTGGAGAGACCCTGCACGCTCGCCAAGGTATTCATCAACTCGCCTCCAAACTGTGCCTCGTCTGTGGCCGTTCCTACAGGTATTCTCACAATGCACGCAGACATGAACTTACCTCTCACGGTTTCGACAGATATACAAACAAAGTCACTCCTAAAAAAACTCTTAATCATCTACAACCCAAACTAAGACCGAACCCATTCAACCCCAAAGCACGGATGATGCCGAATCCTATTAGCCATAAGATGCAGTTCATGAATAAGAACATGCCAACAAAAATAATGCCTATGAATAAAGTTATAATGCCACAGAAACCTATTCCAATAAAAACGACAACGAAGACACAAAATAATTTGCCTTACCCTCTTCGTATTAAAGCACTCAAAGATTTACAAATCAAGAAAAAGGAACCTCAGATTCTAAAGACTTTATTAACAGCTAAACCTGAAGTTCTGGTTTCAGAACCAGAAATTCTAAATTCTGGCCCTGAAAGTCCAGAAACATTGATATCTGAACCTGAAATTGCGTCTTTTCAAGTAGAAGCTATTCTTACGGAACCCGACGCCGATGCATATGATGATCCTGAACAAGGTGACGAAGAAGTTGATGAAGAAATGCAGAACAATCAAAGTCAAAATTATGATACAGTTGATATGGACTCTGAGAACGAAATAGAGATTGCTCGTCAGCAAGCCATCGAAAACGAAGTTGAGGAAACTGCTGATGGGGAAGAAAATATGGACCAGGATGACGATAACAATATGGAAGGCGCTCAGAGTGACAACGAGAAAGATGGCAATGACGATACTATTGAAAGTCAAGAGAACATGGAAGAAGAAGATAGTCTTGAAGTTAAACCTGAAGATCAAATGAAGGACGACGAGGAACAAGAAGAGGAGGGAGAACATGAAGAAGTAGAGATAAATCATAACGAGAACGAGAATGAGGACGACGACGAAGATGAGCTTCCAATATCATTAGCGCCAGTAGTCGAGATTAATGAAGGATTGCAAGTTAATTCGTTTAACAGCGAAGCCAATGAAGAAGACGAAGAACTCGACGAAACAGTCGATCCTAATGACACCATCGAAGATGAAGAGCAGCAGGTTAAGGAACTCGACCCTGACAAAACATATGTTACAAAAACCCAAAGAGACTTCATCCAAAAATATCGTGACATCATCCAGCAAATCAACACGAAACGCTGTTTGTGTTGTGACCGCGAACATCCGCGCAGAAAAGCTGTAATACAACACTTGCAGAAAAACGGGCACAAAGTACCAAAGCACACGTGTTATAATTGTGTGATCACTTTCGGACATATTGGCGCGCTACTCAGCCATATGAGGTCAAATTCTTGTACTAATTTGTGGAAGATTATTTACAATGAAAATGGCATTACCGACGACTTGGTACTCGAAGACGAGCCTAAAGAAGTCAAGGTCGCCTACAAAGATATTTTCAATGCAAGATCATATGCCTGCAAACTCTGTCCAGCTAAATTCCAGTTGAAACAGTTTATTATGAAGCATGTAGCGGATACTCATGAAGATGGACAATCTAGAGTACCGCTCTGTTGTGTTCACTGCCGTGCTAGGTTCAAAGATAAGAGTTTACTTAAGAAACATATTCGTAAAGGTGATTGTATGGTTTATATATCATGTGATTTGTGCTCTGAAACGTTCAGGAATATGCAAGACTTTAACGACCATGCGTTAGCCGTCCACGCTGGCAGTCTCGATCAGTCAGATAATCAGAGCAAATGTGTTGATGGTCGGCCAACAGACTGTCCTTTGTGCGGGAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATACACGCCGAGGAGAAACCTCATTACTGCCAACATTGCGACGCTAAATTCGAACAATCTAATGATTTGAACAAACATATTTACATGGAACATTCGGATAGAACATTAGGCATGCCGCCTGCCGAGCCCGATATGTCCATAGTGAAAGAAGAAGCTGAGGAGTATCATTATTCCTGTACAGAATGTAATGCTATTTTCGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCAGAGCATAACCAAGTGGCCCACCACTGCGACCAGTGTGAGAAAAAATTCCTGCGTCCTTCAGAGCTGGCGGAGCATAAGAACACTCACTTAAGGGTTAAGTTCTATCCTTGTAGTGTATGCCCCAACTCTTACAGCACTCCACAAAAACTGTCTGAGCATGTGCAACAGTCACATCCAGGTATCGGCGCAATCGCGGCAGCTGAGTCTGAATTCTTCTGCGACATCTGTATCAGAGCATTCAAGAGTCGCCAAGCCTACTCAAATCATATGCGTATTCACGCTAAAGTACCTACTACTAACAGGAAACCAACTACAGCCAAAGATGGATTTTCGCCTCAAATTATTGGGAAACCTATCAAACAATATCCTATGGTTCAACCTGGTTTTGTATCATTCAAACCTAACTACAACATCCCTAACGCTCCATATTCCTGTGACATTTGTGGTAAAGGGTTCATGCACAAGAAGAATATATGGAAACATAAGAAAGTGCTACATGCCGACATTTTAGTCGATAGACATGATAGTGAAGAGAACACAATGCAAGCATCCACAGAAGAGGATGAATTCAATCCTGATGAGAATGGTTCTATCCTCTCAACACCACAATTTAATAGTTTCAACTTTACGAATTTCCCTAATAATACTCAACAAACAGCACCAGAAATGCCTTATGAATGTGATTTATGTAGCAAACGGTTCCCGCTTAGGACCAGTTTGTTTAAACATAAGCGCGCTAAACACGGAATTGTAAACCCTAGCTCTAGTGGTAGCATGGATCCAACATCCACGCCATCCGCTAGCGGAGAAGGCAGTAGCAGATCTAGCTGCACAATATGTAGAATCACATTTTCGGACAAGAAATCTTATTATCGCCATCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAAATATGTGGCAAACCGTTAAGTTCAACTTTAGAACTATACGAGCACTTGAAAGCCGCTCATGCAAGGGAATTACTTGGTTTTAACTCTAACCAAGGCCCCAGTAAATCACAAGAGGTGTCGCAAGACATTGAACCTGATTATGAAAATGAACAGGAATCTGCCGACCCTAGTGTCGATTACCAAGCCCGATATCCGTGCGATACTTGTGGCAAACAATTCGTTGGCCTGCTAGCATTGCAGAACCACCAGTGCATCAACCAGGTGTCATCACAGCCACAGACGTTTGACTGTGAGATTTGCCACAAGAGCTACACTTCTATATCTGCATTAAAAAGCCATCGTGGATGGCATTTACGTTCTCCCGATGGAAAGGCAGCCGCTAATAACTCTGGCCTTTGGATGCCTCAGCACAAAGTTACTAGTAAGATAAGTAAACACGAAGTCATCGACCCGTCTCAACTTGCGAAGGTCACACATACTCCCACCCCCCCTCCTGTCACCGCGACCGCAGCGAAGAGACGACTACCACCAGAGGTTGAAGTGACGGTCGTAAATCCAAACAAGAAATTGCGGTCAGACGACTCAGTCGatatggatttgcaaaattctggtACAATCGAGGATAGGTACTGTACGATTTGCGACAAGGAGTTTACAAAACGAGCGGCGTATCAGCGCCACATGGACGAAGTACATCAACCGAACTCAGTGTTTTGTCCGGTCTGTGATAAGAGTTTTACAAGGAAATCTACATTACTAATTCACATGAAGAAACATTACGAGAGCGGTGAGGGCAGTTCCTCAGCTACAGGACAAGGGGACGATGATTTCTCATGTGACTTGTGTGGCGCTCAGTATGACAGTGATCAGGCGTTGAGGGCGCACCGGGCGCGGCACCATGGAGAAGACGAAGAGTCGGCAGAAGAGAGTGATGACGGAAATGTTCCTATAGCTCCTCCCGGCGAATTTACATGTGCGCAATGCGGTGATGGGGTTGCTACACCCAGGGACCTCATCGCCCATCGCACAATGCACGCTACTCCCACCAAATTTTTCTGTAACATTTGTAAAGTGTACTTCGCTCGGGCGCTCGACCTTTCCTCGCATACTCGGGCGCGACATGCCGACAACGAAAAGGTATTCTTCCCTTGTGCCATGTGCGATAGGTTTTATATGAACAAGAAGAGTTTACAGCGGCACATTGAGATGGTTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVEINENDDLPTNVCRKCMDNVNNWQVFKNVCERTQNKLLSLKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAAFSNKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDVLQQSDHDSDSEAELLPEIDDDYVDCKSGYISKNKKIISKAPKLSTSANNVRMKEAFKLRKRKLDVRKHCSRPKNAWQLLFTDDLLELIVSSTNDNIVTNGKSFSQSTSVSEIKALIAILYLHGIMRPTHQKSADLWNSDCGVPCIKNIMKYERFKFLLQNMSFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGMKMVLLVDSSTFYVSNLDVITDPYFGAEEITKKLVQHLAGTGRSIVMDSWFTSFSLMDNLKNEYQLYSIAALNPNSEVIPPLFLSQYRKTRTFMSGFIDDEVSLTSYVNAEGKSVNVLSNEPRYYRKGHINHTTVVSVYKKTQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQGAESENNEEDEEEVNEPAQKFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHGFDRYTNKVTPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMPMNKVIMPQKPIPIKTTTKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPEQGDEEVDEEMQNNQSQNYDTVDMDSENEIEIARQQAIENEVEETADGEENMDQDDDNNMEGAQSDNEKDGNDDTIESQENMEEEDSLEVKPEDQMKDDEEQEEEGEHEEVEINHNENENEDDDEDELPISLAPVVEINEGLQVNSFNSEANEEDEELDETVDPNDTIEDEEQQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVADTHEDGQSRVPLCCVHCRARFKDKSLLKKHIRKGDCMVYISCDLCSETFRNMQDFNDHALAVHAGSLDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKFEQSNDLNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAIAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPTTAKDGFSPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEDEFNPDENGSILSTPQFNSFNFTNFPNNTQQTAPEMPYECDLCSKRFPLRTSLFKHKRAKHGIVNPSSSGSMDPTSTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGFNSNQGPSKSQEVSQDIEPDYENEQESADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVSSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTPTPPPVTATAAKRRLPPEVEVTVVNPNKKLRSDDSVDMDLQNSGTIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDFSCDLCGAQYDSDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -