Basic Information

Insect: Caradrina kadenii
Gene Symbol: Zfa
Assembly: GCA_947462355.1
Location: OX381678.1:5220291-5228837[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0065 0.38 11.4 1.1 3 23 699 720 698 720 0.96

2 23 0.21 12 6.6 0.3 1 22 1108 1129 1108 1129 0.95

3 23 7.5 4.3e+02 1.7 0.4 1 22 1171 1192 1171 1194 0.82

4 23 0.016 0.95 10.1 4.8 2 22 1204 1224 1203 1224 0.93

5 23 0.35 20 5.9 0.1 3 23 1233 1254 1231 1254 0.89

6 23 0.019 1.1 9.9 0.3 3 23 1275 1296 1273 1296 0.96

7 23 0.016 0.95 10.1 3.2 1 23 1302 1325 1302 1325 0.95

8 23 0.13 7.3 7.3 0.0 1 23 1350 1373 1350 1373 0.90

9 23 0.019 1.1 9.9 3.4 1 23 1378 1400 1378 1400 0.97

10 23 0.0087 0.5 11.0 0.2 1 23 1406 1429 1406 1429 0.95

11 23 0.004 0.23 12.0 0.8 1 23 1442 1464 1442 1464 0.97

12 23 0.00018 0.01 16.3 1.8 1 23 1514 1537 1514 1537 0.97

13 23 0.00011 0.0062 17.0 0.9 1 23 1597 1620 1597 1620 0.96

14 23 0.0024 0.14 12.7 2.1 2 23 1647 1669 1646 1669 0.95

15 23 0.04 2.3 8.9 0.1 2 23 1675 1697 1674 1697 0.94

16 23 0.01 0.58 10.8 0.2 1 21 1741 1761 1741 1762 0.95

17 23 0.00042 0.024 15.1 1.0 1 23 1772 1794 1772 1794 0.93

18 23 0.00011 0.0065 16.9 0.3 2 23 1886 1908 1886 1908 0.93

19 23 4e-07 2.3e-05 24.6 1.4 3 23 1915 1935 1914 1935 0.98

20 23 0.03 1.7 9.3 0.4 1 23 1952 1974 1952 1975 0.95

21 23 0.19 11 6.8 0.0 1 23 1998 2020 1998 2020 0.97

22 23 0.028 1.6 9.4 0.6 1 23 2026 2049 2026 2049 0.95

23 23 0.00026 0.015 15.8 0.4 1 23 2057 2080 2057 2080 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0065	0.38	11.4	1.1	3	23	699	720	698	720	0.96
2	23	0.21	12	6.6	0.3	1	22	1108	1129	1108	1129	0.95
3	23	7.5	4.3e+02	1.7	0.4	1	22	1171	1192	1171	1194	0.82
4	23	0.016	0.95	10.1	4.8	2	22	1204	1224	1203	1224	0.93
5	23	0.35	20	5.9	0.1	3	23	1233	1254	1231	1254	0.89
6	23	0.019	1.1	9.9	0.3	3	23	1275	1296	1273	1296	0.96
7	23	0.016	0.95	10.1	3.2	1	23	1302	1325	1302	1325	0.95
8	23	0.13	7.3	7.3	0.0	1	23	1350	1373	1350	1373	0.90
9	23	0.019	1.1	9.9	3.4	1	23	1378	1400	1378	1400	0.97
10	23	0.0087	0.5	11.0	0.2	1	23	1406	1429	1406	1429	0.95
11	23	0.004	0.23	12.0	0.8	1	23	1442	1464	1442	1464	0.97
12	23	0.00018	0.01	16.3	1.8	1	23	1514	1537	1514	1537	0.97
13	23	0.00011	0.0062	17.0	0.9	1	23	1597	1620	1597	1620	0.96
14	23	0.0024	0.14	12.7	2.1	2	23	1647	1669	1646	1669	0.95
15	23	0.04	2.3	8.9	0.1	2	23	1675	1697	1674	1697	0.94
16	23	0.01	0.58	10.8	0.2	1	21	1741	1761	1741	1762	0.95
17	23	0.00042	0.024	15.1	1.0	1	23	1772	1794	1772	1794	0.93
18	23	0.00011	0.0065	16.9	0.3	2	23	1886	1908	1886	1908	0.93
19	23	4e-07	2.3e-05	24.6	1.4	3	23	1915	1935	1914	1935	0.98
20	23	0.03	1.7	9.3	0.4	1	23	1952	1974	1952	1975	0.95
21	23	0.19	11	6.8	0.0	1	23	1998	2020	1998	2020	0.97
22	23	0.028	1.6	9.4	0.6	1	23	2026	2049	2026	2049	0.95
23	23	0.00026	0.015	15.8	0.4	1	23	2057	2080	2057	2080	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGATGACCTGCCCACCAATGTCTGCAGGAAATGTGTGGACAATGTCAATAACTGGCATGTTTTTAAAAATGTATGTGAAAGGACACAAAACAAACTACTGTCTCTAAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAACCACTATCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTTTTCAAACAAAGTGCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGATCCACGAATGGATTGGCATCGGGTTCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCCCTACAAACAAAGGAAGAGTGTGACGTTTTGCAACATTCAGACCATGATTCAGAAACAGAAGCCGAACTCCAACCAGAAATTGATGATTGTTATGTTGATTGCAAAAGCGGTTACATATGCAAAAATAAAAAAGTTTTATCAAAGGTTCCAAAACTATCTACTTCTGTGAATAATGCCAGAGTCAAAGAAGCCTTCAAACTCAGGAAACGTAAATCTGATGTACGTAAACATTGTTCACGGCCTAAAAACGCGTGGCAGTTGTTATTCACCGATGACCTACTAGAATTGATTGTTGCTTCCACTAATGACAATATTGTGACAAATGGGAAAAGTTCCACGGAGTCAACTAGCGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATCTGCATGGCATAATGCGGCCGACGCATCAGAAATGTAGTGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAAGGTCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATCAGCTTCGATAAGGAGGACGACGACAGCATTATACAGTTCGACATAATGAAGCGTATGCGCAAAGTATTCGAAATCTTCGCAATGAATTGCAGAACATCTCACGAGATCGAGAATGTCGCAGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTCCGATACGATATTGATAAGAAACCGCTGAAGCGGGGAATCAAAATGGTACTACTGGTTGATTCATCCACATTCTACATGAGCAATTTGGATGTCATTACCGATCCTTATTTTGGCGCCGAAGAGATAACCAAAAAGTTGGTGCAGCATTTAGCTGGATCTGGTAGATCTATTGTTATGGACAGTTGGTTTACATCTTCCTCATTGATTGATAGCCTTAAAAATGAGTACCAGTTGTATTCTATTGCAGCTTTAAACCCAAACAGTGATATGATTCCACCTCTATTTCTATCTCAATACAGAAAATGTCGATCATTCATGTCTGCATTTATTGATCATGAAGTATCGTTGACATCTTATGTCAATGCCGAGGGGAAATCAGTAAATGTATTGACAAACGAGCCCAGATATTATAGGAAAGGTCATATAAACCATACTACGGTTGTATCGGTGTACAAGAAAAATCAGTCTGCCGTAGAAATTGTAGATGTTATCATGAATTATTACACTACAATGCAGCTTACTAATGATTGGACATTGTCCTTATTCTTCACATTGCTGAATGTTGCCTCCGTGAACGCTCAAGTGTTGTGGTGCTCTCAAAACTCGCATATAACGCAGCGTCGTCTGTTTATTAAAGATTTAGCTTTAAGCTTATTAGAACCAGACGAAGAAAGAATGTTAATATCTCCAATACTTGATTTGGAACAAAGGAAAAACAAATTCTCTATAGGTGCGGAGAGTGAAAATAATGAAGAAGACGAGGAAGAAATGAATGAGCCTGCACAAAACTTCCCGAAAATGCCCCACATGCCTGAAGTGTCCATCACAGTCATGAGGCCTACTGGTGAAACTCTGCATGCACGTCAAGGTATTCACCAACTCGCCTCCAAGCTGTGCCTCGTCTGCGGCCGCTCTTACAGGTACTCTCACAACGCTCGCAGACATGAACTTACCGCTCATAGTTTCGATAGATATACAAACAAAATTACTCCTAAAAAAACCCTCAATCATCTACAACCCAAGCTTAGACCGAACCCATTTAACCCTAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCTTGAACAAGAACATCTCAGCAAAAATTATGCCCATGAACAAAGTCATAACGCCTCAGAAACCCATTCCAATAAAGACGTCAAAGACGACACAAAATAATTTGCCTTATCCTCTACGTATTAAAGCACTCAAAGATTTACAAATAAAGAAAAAGGAGCCTCAAATTCTAAAGACTTTGTTAACCTCCAAACCTGAAGTTCTGGTGTCAGAACCAGAAATACTTAATTCTGGGCCTGAAAGCCCAGAAACATTGATTTCTGAGCCTGAAATCGCGTCTTTTCAAGTCGAAGCTATCCTTACGGAACCCGATGCCGACGCATACGATGATCCGCAACAAGGCGACGAAGATGTTGATGAAGATATGCAAAACAATCAAAGTCAAAACTATGACACAGTCGATATGGATTCTGAGAACGAAATAGAGATTGCTCGTCAACAAGGTGTTGAACACGAAGGTGATGATAATGCTGATGGGGATGAGAATATTGATCATGACGACGATAATAACATGGAAGGTGGTCAGAGTGATAACGAGAAAGATGGCCATGACGATACAGCAGAAAGTCAAGAGAACATGGAAGAGGAAGATAGCATTGATATTAAAGCTGAAGGTGAAATAAAAGACGAGGAGGAGGACCAAGAGGAAAGAGATCATGAAGATATTGAGATGAATCATAACGACAACGAAGATGAAGACGATGATGAACTTCCAATATCGTTAGCGCCAGTCGTAGAAATAAACGAGGGATTGCAAGCCAACTCGTTTAACAGCGAAGTCAACGAGGACGACGAGGAACTTGATGAAACCGCGGATGGTGATACTAATGAAACCATTGATGAGGACGAACAGGTCAAAGAACTAGACCCTGACAAAACATATGTTACAAAAACCCAAAGAGACTTCATCCAAAAATATCGCGACATCATTCAACAGATCAACACGAAGCGTTGTTTATGTTGTGATCGAGAACATCCGCGCAGAAAAGCTGTTATACAACATTTGCAGAAAAACGGACACAAAGTACCAAAACACACTTGTTATAATTGTGTCATCACGTTCGGACATATTGGCGCACTACTCAGCCATATGAGGTCGAACTCTTGCACTAATTTGTGGAAGATTATTTACAATGAAAATGGTATCACCGACGACTTAGTTCTCGAAGATGAGCCGAAAGAAGTCAAGGTCGCGTACAAAGATATTTTCAATGCCAGGTCATACGCTTGTAAGCTCTGTCCAGCTAAATTCCAACTGAAACAGTTTATTATGAAACATGTTTTAGATACTCATGAAGACGGACAATCTAGAGTACCTCTCTGTTGCGTCCACTGCCGTTCTAGGTTCAAAGATAAGAGTTTACTTAAGAAACACATTCGCAAAGGTGATTGTACAGTTTATATTGCTTGCGATTTGTGTTCAGAAAAGTTCAGAAACGTGCAGGACTTTAATGACCATGCGTTAGCTATCCACGCTGGCAGTTTCGATCAGTCAGATAATCAAAGCAAATGTGTTGACGGTCGACCGACAGACTGTCCTTTGTGCGGAAAGAAAAACAGTAGCTATCCGAATTTAGTGAAACATTTGAAGATAACCCACGCTGAGGAGAAACCTCACTACTGCCAGCACTGCGACTCTAAATACGAACAAGCTACTGAACTGAACAAACACATTTACATGGAGCATTCTGACAGATCCTTAGGCATGACCACTGAACCAGATATGTCCATAGTGAAGGAAGAAGCGGAGGAGTACCATTACTCCTGTACGGAATGTAATGCCATTTTCGAAACTGTCGATGCGTGGACTGATCACCAGGTTGCCGAACATAACCAAGTGGCCCACCACTGTGACCAGTGTGAGAAGAAATTCCTTCGTCCTTCAGAGCTGGCAGAGCATAAGAATACTCACTTAAGGGTTAAGTTTTATCCTTGCAGTGTATGCCCCAACTCTTACAGTACTCCACAGAAACTGTCTGAGCATGTGCAGCAGTCACATCCGGGGATCGGCGCAGTCGCGGCAGCTGAGTCGGAATTCTTCTGCGACATCTGCATTAGAGCATTTAAAAGTCGTCAAGCTTACTCAAACCATATGCGTATACACGCTAAAGTTCCTACCACTAACAGAAAACCTGCTGTCGGTAAAGAAGGGTTCGCGCCTCAAGTTATAGGAAAACCCATCAAACAGTATCCTATGGTTCAACCTGGTTTTGTATCATTTAAACCTAATTACAACATCCCCAACGCTCCGTATTCTTGTGACATTTGTGGTAAAGGATTCATGCACAAGAAAAATATATGGAAACACAAGAAAGTGTTGCATGCCGATATTTTAGTCGATAGACATGATAGTGAAGAGAATACTATGCAAGCTTCTACAGAAGAGGAGGAATTCAATCCAGATGAGAACGGTGCCGTACTGTCGACGCCACAATTTAATAGTTTTAACTTTACGAACTTCCCGAACAATACTCAACAAACGACTCCAGAAACAATGCCTTATTCGTGTGAGTTATGTGGCAAACGGTTCCCTCTAAAGACAAGTTTATGGAAACATAAACGCGCTAAACACGGAATTGTAAACCCTAGCACCAGTGGTAGTAACGATACATCCACGCCATCCGCTAGCGGGGAAGGCAGTAGTAGATCTAGCTGCACAATATGTAGGATTACATTTTCAGATAAGAAATCTTATTATCGCCATCGAAAGAATGTCCACAAATCCACCGTTCAAATGTGCAAAATCTGTGGAAAGCCCCTGAGTTCCACTTTGGAGTTATACGAGCACTTAAAAGCCGCTCATGCAAGGGAATTACTGGGTTATAACGCAAACCAAGGGTCCAGTAAATCACAGGATATGTCACAAGACATGGAACCCGATTATGAAAATGATCAGGAGTCTGTCGACCCCAGTGTCGATTACCAAGCGCGTTATCCGTGCGATACTTGTGGCAAACAATTTGTTGGTTTGCTCGCGTTACAGAACCACCAGTGCATTAATCAGGTTGCATCACAACCACAGACGTTTGACTGCGAGATTTGTCACAAGAGTTACACCTCAATATCTGCACTAAAGAGCCATCGTGGTTGGCATTTACGTTCACCCGATGGCAAAGCAGCCGCCAATAATTCAGGACTTTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGCAAACATGAAGTTGTCGACCCCTCGCAACTAGCTAAGGTCACACATACTCCTACTCCCCCTCCTGTCAGTGCTAGCGCAGCGAAAAGAAGGCTGCCGCCAGAGGTCGAAGTGACTGTTGTAAATCCAAACAAGAAATTACGCTCAGACGACTCTGTCGACCTGGATCAAAGTACTGGTGCACTAGAGGATAGGTACTGTACGATTTGTGACAAGGAATTTACCAAACGAGCGGCGTATCAGCGCCACATGGACGAAGTACATCAACCGAACTCAGTGTTTTGCCCGGTTTGTGATAAGAGTTTCACTAGGAAGTCCACTTTACTTATTCACATGAAGAAACACTACGAGGGTGAGGGCAGTTCCTCCGCCACAGGTCAAGGGGACGATGATTTCTCCTGTGATTTGTGTGGCGCTCAGTATGACAACGATCAGGCGTTGAGGGCGCACCGAGCGAGGCATCACGGGGAAGACGAAGAGTCGGCAGAAGAGAGTGACGACGGTAATGTCCCTATAGCTCAGCCCGGTGAGTTCACATGTGCGCAATGTGGTGATGGCGTCGCTACACCCCGAGACCTCATCGCCCATCGCACAATGCATGCTACTCCCACCAAATTCTTCTGTAACATATGTAAAGTGTACTTCGCTCGGGCGCTTGACCTGTCCTCGCACACTAGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGGTTCTACATGAACAAGAAGAGTTTACAGCGGCATATCGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVQINENDDLPTNVCRKCVDNVNNWHVFKNVCERTQNKLLSLKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAGFSNKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDVLQHSDHDSETEAELQPEIDDCYVDCKSGYICKNKKVLSKVPKLSTSVNNARVKEAFKLRKRKSDVRKHCSRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSSTESTSVSEIKTLIGILYLHGIMRPTHQKCSDLWNSECGVPCVRKVMKYERFKFLLQNISFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKLVQHLAGSGRSIVMDSWFTSSSLIDSLKNEYQLYSIAALNPNSDMIPPLFLSQYRKCRSFMSAFIDHEVSLTSYVNAEGKSVNVLTNEPRYYRKGHINHTTVVSVYKKNQSAVEIVDVIMNYYTTMQLTNDWTLSLFFTLLNVASVNAQVLWCSQNSHITQRRLFIKDLALSLLEPDEERMLISPILDLEQRKNKFSIGAESENNEEDEEEMNEPAQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFLNKNISAKIMPMNKVITPQKPIPIKTSKTTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPQQGDEDVDEDMQNNQSQNYDTVDMDSENEIEIARQQGVEHEGDDNADGDENIDHDDDNNMEGGQSDNEKDGHDDTAESQENMEEEDSIDIKAEGEIKDEEEDQEERDHEDIEMNHNDNEDEDDDELPISLAPVVEINEGLQANSFNSEVNEDDEELDETADGDTNETIDEDEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCSEKFRNVQDFNDHALAIHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKITHAEEKPHYCQHCDSKYEQATELNKHIYMEHSDRSLGMTTEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPAVGKEGFAPQVIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFNFTNFPNNTQQTTPETMPYSCELCGKRFPLKTSLWKHKRAKHGIVNPSTSGSNDTSTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDMSQDMEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVASQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDPSQLAKVTHTPTPPPVSASAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDQSTGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYEGEGSSSATGQGDDDFSCDLCGAQYDNDQALRAHRARHHGEDEESAEESDDGNVPIAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -