Basic Information

Insect: Xestia rhomboidea
Gene Symbol: Zfa_1
Assembly: GCA_963853795.1
Location: OY970767.1:14358846-14367357[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0077 0.79 11.3 1.1 3 23 731 752 730 752 0.96

2 23 0.25 25 6.6 0.3 1 22 1137 1158 1137 1158 0.95

3 23 8.9 9.1e+02 1.7 0.4 1 22 1200 1221 1200 1223 0.82

4 23 0.02 2 10.1 4.8 2 22 1233 1253 1232 1253 0.93

5 23 3.1 3.2e+02 3.2 0.1 3 23 1262 1283 1261 1283 0.89

6 23 0.021 2.1 10.0 0.2 3 23 1304 1325 1302 1325 0.96

7 23 0.0043 0.44 12.1 2.4 1 23 1331 1354 1331 1354 0.95

8 23 0.15 15 7.3 0.0 1 23 1380 1403 1380 1403 0.90

9 23 0.022 2.3 9.9 3.4 1 23 1408 1430 1408 1430 0.97

10 23 0.01 1 11.0 0.2 1 23 1436 1459 1436 1459 0.95

11 23 0.0048 0.49 12.0 0.8 1 23 1472 1494 1472 1494 0.97

12 23 0.00021 0.022 16.3 1.8 1 23 1544 1567 1544 1567 0.97

13 23 0.0022 0.22 13.1 1.4 1 23 1627 1650 1627 1650 0.96

14 23 0.0028 0.29 12.7 2.1 2 23 1677 1699 1676 1699 0.95

15 23 0.047 4.8 8.9 0.1 2 23 1705 1727 1704 1727 0.94

16 23 0.012 1.2 10.8 0.2 1 21 1771 1791 1771 1792 0.95

17 23 0.0005 0.051 15.1 1.0 1 23 1802 1824 1802 1824 0.93

18 23 0.00013 0.014 16.9 0.3 2 23 1917 1939 1917 1939 0.93

19 23 4.7e-07 4.8e-05 24.6 1.4 3 23 1946 1966 1945 1966 0.98

20 23 0.0048 0.49 12.0 0.6 1 23 1984 2006 1984 2007 0.95

21 23 0.22 22 6.8 0.0 1 23 2030 2052 2030 2052 0.97

22 23 0.033 3.3 9.4 0.6 1 23 2058 2081 2058 2081 0.95

23 23 0.0003 0.031 15.8 0.4 1 23 2089 2112 2089 2112 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0077	0.79	11.3	1.1	3	23	731	752	730	752	0.96
2	23	0.25	25	6.6	0.3	1	22	1137	1158	1137	1158	0.95
3	23	8.9	9.1e+02	1.7	0.4	1	22	1200	1221	1200	1223	0.82
4	23	0.02	2	10.1	4.8	2	22	1233	1253	1232	1253	0.93
5	23	3.1	3.2e+02	3.2	0.1	3	23	1262	1283	1261	1283	0.89
6	23	0.021	2.1	10.0	0.2	3	23	1304	1325	1302	1325	0.96
7	23	0.0043	0.44	12.1	2.4	1	23	1331	1354	1331	1354	0.95
8	23	0.15	15	7.3	0.0	1	23	1380	1403	1380	1403	0.90
9	23	0.022	2.3	9.9	3.4	1	23	1408	1430	1408	1430	0.97
10	23	0.01	1	11.0	0.2	1	23	1436	1459	1436	1459	0.95
11	23	0.0048	0.49	12.0	0.8	1	23	1472	1494	1472	1494	0.97
12	23	0.00021	0.022	16.3	1.8	1	23	1544	1567	1544	1567	0.97
13	23	0.0022	0.22	13.1	1.4	1	23	1627	1650	1627	1650	0.96
14	23	0.0028	0.29	12.7	2.1	2	23	1677	1699	1676	1699	0.95
15	23	0.047	4.8	8.9	0.1	2	23	1705	1727	1704	1727	0.94
16	23	0.012	1.2	10.8	0.2	1	21	1771	1791	1771	1792	0.95
17	23	0.0005	0.051	15.1	1.0	1	23	1802	1824	1802	1824	0.93
18	23	0.00013	0.014	16.9	0.3	2	23	1917	1939	1917	1939	0.93
19	23	4.7e-07	4.8e-05	24.6	1.4	3	23	1946	1966	1945	1966	0.98
20	23	0.0048	0.49	12.0	0.6	1	23	1984	2006	1984	2007	0.95
21	23	0.22	22	6.8	0.0	1	23	2030	2052	2030	2052	0.97
22	23	0.033	3.3	9.4	0.6	1	23	2058	2081	2058	2081	0.95
23	23	0.0003	0.031	15.8	0.4	1	23	2089	2112	2089	2112	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCCACCAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTggcatgtttttaaaaatgtatgtgAAAGGACACAAAACAAACTACTGTCTCTAAAAGATGGTAACCAACTAGAAGAGgtgaaaataaaaagtgaacCACTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGGTCATATCCTGTCACTGAGAATGCCGGCTACTCAAACAAAGTGCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGATCCGCGAACGGATTGGCACCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAGACAAGGGAAGAGTGTGATGTTTTGCAGCATTCTGACCATGACTCTGATACCGAAGCCGAACTCCAAACAGAAATTGATGACAGTTATGTTAATAGCAAAAGCGGGTATatatgcaaaaataaacaagttatGTCAAAAGTTCCAAAACTATCAACTTCTGTAAATAATGCCAGAGTGAAAGAAGCTTTCAAACTCAGGAAACGTAAACCCGAAGTCCGTAAACATTGTCCACGACCTAAAAATGCGTGGCAGTTGTTATTCACTGATGACCTACTAGAGTTGATTGTTGCCTCTACTAATGACAATATTGTGACAAATGGGAAAAGTTTCACGGAGTCAACGAGCGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATCTGCACGGCGTAATGCGGCCAACACATCAGAATTGTAGTGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCATCAGAAATATCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACGTGAGCTTCGATAAAGAGGACGACAACAGCATTATACAGTTCGACATAATGAAGCGTATGCGTAAAGTATTCGAGATCTTCGCTATGAATTGCAGAACATCTCATGAGATCGAGAATATCGCAGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATTGATAAGAAGCCGCTGAAGCGAGGCTTAAAGATGATATTGCTAGTTGATTCATCCACATTCTATATGAGCAACTTAGATGTCATCACTGACCCTTACTTCGGCCCCGAGGAGATAACGAAAAAGTTGGTTCAGCATTTGGCTGGAACTGGCAGATCTATTGTTATGGACAGTTGGTTCACTTCTTCCTCACTGATGGATATCCTTAAAAATGAGTACCAGTTGTATTCTATCGCAGCCTTGCACCCAAACAGTGATATGATTCCTCCAGTATTTCTATCTCAGTACAGGAAATGTCGAACATTCATGTCTGGATTTATTGATCATGAAGTATCATTGACATCGTATGTCAATACTGAGGGGAAATCCATAAATGTATTGACTAATGAACCTAGATATTACAGGAAAGGTCATATAAATCACACTACAGTTGTTTCTGTGTATAAGAAGAATCAGTCAGCGGTAGAAGTTGTGGATGTTCTCATGAATTACTACACAACAATGCAACACACAAATGATTGGACGTTGTCCTTGTTCTTCACTTTGTTAAACATTGCGTCCGTTAACGCTCAAGTATTGTGGTGCTCCCAAAACTCGAGTGTTACGCAGCGTCGCTTATTCATCAAAGATTTGGCTTTAAGCTTACTAGAACAGGATGAAGAAAGAATGTTAATTTCTCCGATACATGATTTAGAAGAGAGGAAAAACAAATTTTCTCTTGTACGCAGTAATGCTCAACCATATTATAAGAATAGGAGAAGGTGCAAGATATGTGTGAAAACAACGAAACGAGATAGGAGAACCAGACAGTTCTGTGGTGCGGAGAGTGAAAACAATGAAGAAGACGAGGAAGAAATGAACGAGCCTGCACAAAATTACCCAAAAATGCCCCATATGCCCGAGGTGTCCATCACAGTCATGAGGCCTACTGGCGAGACCCTGCACGCTCGCCAAGGTATTCACCAACTCGCTTCCAAACTGTGCCTCGTCTGCGGCCGCTCCTACAGGTACTCTCACAACGCACGCAGACATGAACTTACCGCGCACAGCTTCGACAgatatacaaacaaaattactCCTAAAAAAACCCTAAATCATCTACAACCCAAACTGAGACCGAACCCATTCAACCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCATGAACAAGAACATGCCAACAAAAATAATGCCCATAAACAAAGTTATCACGCCACAGAAACCCATTCCAATAAAAACGTCGTCAAAGACACAAAATAATTTGCCTTATCCTCTACGTATAAAAGCactcaaagatttacaaattaaGAAGAAGGAGCCTCAGATTCTGAAGACTTTGTTAACCTCTAAACCTGAAGTTCTGGTCTCAGAACCAGAAATTCTTAATTCTGGGCCTGAGAGTCCAGAAACATTGATATCTGAGCCTGAAATTGCATCTTTCCAAGTTGAAGCTATTCTTACGGAACCCGATGCCGATGCATACGATGATCCGCAGCAAGGCGATGAAGAAATTGATGAAGAAATGCaaaacaatcaaaatcaaaactatgaCACTGTTGATATGGACTCTGAGAACGAAATAGAGATAGCTCGTCAGCAAAGCAGTGAACACGATGGCGAGGAAAATGCTGATGGGGAAGAGAATATGGACCATGATGACGACAATAACATGGAAGGCGGTCCGAGCGACAACGAGAAAGATGCCAATGACGATACAGCTGATAGCCAAGAGaacatggaagaagaagatagtgTTGATATTAAACCTGAAGAGCAAATGAAGGACGATGATGGCCAAGAGGATGGAGAACACGAAGAAGTAGAAATGAATCATAACGAAAACGAGGAAGAAGACGATGATGACCTGCCCATTTCTCTAGCGCCCGTCGTGGAAATAAGTGAGGGATTGCAAGGTGACTCGTTCAACAGCGAAGTCATTGAGGAAGAGGAGGAGGTCGACGAAACTGTCGATCCCAATGACACCATCGAAGAGGAAGAGCAGGTTAAGGAACTTGACCCGGACAAAACATATGTTACGAAAACCCAAAGAGACTTTATCCAAAAATACCGCGATGTCATTCAGCAAATCAACACGAAGCGTTGTTTATGTTGTGACCGAGAACATCCGCGCAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGACACAAGGTACCAAAACACACATGCTACAATTGTGTCATCACGTTCGGACATATTGGCGCACTACTCAGCCATATGAGGTCGAATTCTTGCACCAATTTGTGGAAGATTATTTACAATGAAAATGGTATTACTGACGACTTGGTTCTCGAAGATGAGCCGAAAGAGGTCAAGGTAGCTTACAAAGATATTTTCAATGCCAGGTCGTACGCTTGCAAACTCTGCCCAGCTAAATTCCAACTGAAACAGTTTATAATGAAGCATGTTTTGGATACCCATGAGGATGGACAGTCAAGGGTACCACTCTGTTGTGTCCACTGCCGTTCAAGATTCAAAGATAAGAGTTTACTAAAGAAACATATTCGTAAAGGTGATTGTACAGTTTATGTTGCTTGCGATTTGTGCTCAGAAAAGTTCGGGAACATGCAGGACTTCAATGACCATGCGCTAGCCATCCACGCGGGCAGTTTCGATCAGTCGGATAATCAGAGCAAATGTGTTGACGGTCGACCAACAGACTGTCCTTTGTGTGGAAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATACATGCTGAGGAAAAACCTCACTACTGCCAGCATTGCGACGCGAAATACGAACAAGCTACTGAACTGAACAAACACATTTACATGGAGCATTCTGACAGAACACTAGGCATGCCGCCTGCTGAACCGGATATGTCCATAGTGAAGGAGGAAGCAGAGGAGTACCACTACTCCTGTACGGAATGTAATGCTATATTCGAAACTGTTGATGCCTGGACTGATCACCAAGTTGCTGAACATAACCAGGTGGCCCACCACTGTGACCAATGTGAGAAGAAATTCCTTCGTCCTTCAGAGCTGGCAGAGCACAAGAACACTCACTTGAGGGTTAAATTTTATCCTTGCAGTGTATGTCCCAACTCTTACAGCACTCCACAGAAACTGTCTGAGCATGTGCAACAGTCGCATCCAGGAATTGGCGCGGTCGCGGCAGCCGAGTCGGAATTCTTCTGCGACATCTGTATCAGAGCATTCAAGAGTCGTCAAGCTTACTCAAATCATATGCGTATTCACGCTAAAGTACCTACTACTAATAAGAAACCGACTCCAATCAAAGAGGGATTCGCGCCTCAAATTATTGGGAAACCCATTAAGCAGTACCCTATGGTTCAACCGGGTTTTGTATCATTTAAACCTAATTACAACATCCCTAACGCTCCATATTCTTGTGACATTTGTGGTAAAGGATTCATgcataagaaaaatatatggAAACACAAGAAAGTGTTGCATGCTGATATTTTAGTTGATAGACATGATAGTGAAGAGAACACTATGCAAGCTTCCACGGAAGAGGAGGAATTCAACCCCGATGAGAATGGTGCCGTTCTCTCAACGCCacaatttaatagttttaactTTACGAACTTCCCGAACAATGCTCAACAATCAACACCAGAAACAATGCCATATTCGTGTGACTTATGTAGCAAACGGTTCCCGCTTAGGACCAGTTTGTGGAAGCACAAGCGCGCTAAACACGGAATTGTAAATCCTAGCACTAGTGGTAACAACGAAACATCCACGCCGTCCGCTAGCGGGGAAAGCAGTAGTCGATCTAGCTGCACTATATGCAGAATCACATTTTCAGATAAGAAATCTTACTATCGCCATCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAAATATGTGGCAAACCGCTAAGTTCAACTTTGGAATTATACGAGCACTTGAAAGCCGCTCATGCAAGGGAATTACTGGGATATAACGCTAACCAGGGCTCCAGTAAATCACAAGATATGTCACAAGAGATGGAACCCGATTATGAAAATGATCAGGAGTCTATCGACCCGAGCGTTGATTACCAAGCGCGGTATCCGTGCGATACTTGTGGCAAACAATTTGTTGGTTTGCTAGCTTTGCAAAACCACCAGTGCATCAATCAGATAGCATCACAGCCACAGACGTTTGACTGCGAGATTTGTCACAAGAGTTACACTTCAATATCTGCGCTAAAAAGCCATCGTGGGTGGCATTTACGTTCGCCCGATGGAAAAGCAGCCGCCAACAATTCTGGCCTGTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGTAAACATGAGGTCGTGGACGCGTCTCAACTGGCTAAGGTCACACACACCCCAACTCCCCCACCTGTATCTGCAACCGCAGCGAAAAGAAGACTACCACCAGAGGTCGAAGTGACAGTCGTAAATCCTAACAAGAAACTGCGTTCAGACGACTCGGTCGACTTAGATATGCAAAGTTCTGGTGCCATCGAGGATAGGTACTGTACGATTTGCGATAAGGAATTTACAAAGCGAGCGGCGTACCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTGTTTTGCCCGGTCTGTGATAAGAGTTTTACAAGGAAATCCACATTGCTCATTCACATGAAGAAACATTACGAGAGCGGTGAGGGCAGTTCCTCTGCTACAGGTCAGGGAGACGATGATTACTCCTGTGACTTGTGTGGAGCTCAGTATGACAATGAACAGTCATTGAGGGCGCACCGAGCGCGGCACCACGGCGAAGATGAAGAGTCGGCTGAAGAGAGTGACGACGGAAATGTTCCTATTGCTCCTCCCGGTGAATTCACATGTGCGCAATGTGGTGATGGCGTCGCTACTCCCAGGGACCTCATCGCCCATCGCACAATGCACGCTACTCCCACCAAATTCTTCTGTAACATATGCAAAGTGTACTTCGCTCGGGCGCTCGACCTCTCGTCGCACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGGTTTTACATGAACAAGAAGAGTTTACAGCGGCACATTGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLLSLKDGNQLEEVKIKSEPLSDEAYDDGVVIDGSYPVTENAGYSNKVQPEGPPILASLGLTPRSDKKCVDPRTDWHRVHAILDMVQDNEVIDSLQTREECDVLQHSDHDSDTEAELQTEIDDSYVNSKSGYICKNKQVMSKVPKLSTSVNNARVKEAFKLRKRKPEVRKHCPRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSFTESTSVSEIKTLIGILYLHGVMRPTHQNCSDLWNSECGVPCIRNIMKYERFKFLLQNVSFDKEDDNSIIQFDIMKRMRKVFEIFAMNCRTSHEIENIAVIDEIIVPVYGPCPFRYDIDKKPLKRGLKMILLVDSSTFYMSNLDVITDPYFGPEEITKKLVQHLAGTGRSIVMDSWFTSSSLMDILKNEYQLYSIAALHPNSDMIPPVFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSINVLTNEPRYYRKGHINHTTVVSVYKKNQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWCSQNSSVTQRRLFIKDLALSLLEQDEERMLISPIHDLEERKNKFSLVRSNAQPYYKNRRRCKICVKTTKRDRRTRQFCGAESENNEEDEEEMNEPAQNYPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMPINKVITPQKPIPIKTSSKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPQQGDEEIDEEMQNNQNQNYDTVDMDSENEIEIARQQSSEHDGEENADGEENMDHDDDNNMEGGPSDNEKDANDDTADSQENMEEEDSVDIKPEEQMKDDDGQEDGEHEEVEMNHNENEEEDDDDLPISLAPVVEISEGLQGDSFNSEVIEEEEEVDETVDPNDTIEEEEQVKELDPDKTYVTKTQRDFIQKYRDVIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYVACDLCSEKFGNMQDFNDHALAIHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATELNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNKKPTPIKEGFAPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFNFTNFPNNAQQSTPETMPYSCDLCSKRFPLRTSLWKHKRAKHGIVNPSTSGNNETSTPSASGESSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDMSQEMEPDYENDQESIDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIASQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDASQLAKVTHTPTPPPVSATAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQSSGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNEQSLRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00447463;
80% Identity: -