Basic Information

Insect: Mythimna separata
Gene Symbol: -
Assembly: GCA_030763345.1
Location: CM061178.1:16141113-16149622[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.012 1.1 10.8 1.6 3 23 682 703 681 703 0.96

2 22 0.26 25 6.6 0.3 1 22 1089 1110 1089 1110 0.95

3 22 0.0043 0.41 12.2 4.0 2 22 1185 1205 1184 1205 0.93

4 22 0.11 11 7.7 0.1 2 23 1213 1235 1212 1235 0.89

5 22 0.022 2.1 10.0 0.2 3 23 1256 1277 1254 1277 0.96

6 22 0.0013 0.12 13.9 3.4 1 23 1283 1306 1283 1306 0.95

7 22 0.16 15 7.3 0.0 1 23 1332 1355 1332 1355 0.90

8 22 0.023 2.2 9.9 3.4 1 23 1360 1382 1360 1382 0.97

9 22 0.011 1 11.0 0.2 1 23 1388 1411 1388 1411 0.95

10 22 0.005 0.47 12.0 0.8 1 23 1424 1446 1424 1446 0.97

11 22 0.00022 0.021 16.3 1.8 1 23 1496 1519 1496 1519 0.97

12 22 0.0014 0.13 13.8 1.1 1 23 1578 1601 1578 1601 0.96

13 22 0.0029 0.28 12.8 2.1 2 23 1629 1651 1628 1651 0.95

14 22 0.049 4.7 8.9 0.1 2 23 1657 1679 1656 1679 0.94

15 22 0.012 1.2 10.8 0.2 1 21 1723 1743 1723 1744 0.95

16 22 0.00052 0.049 15.1 1.0 1 23 1754 1776 1754 1776 0.93

17 22 0.00014 0.013 16.9 0.3 2 23 1870 1892 1870 1892 0.93

18 22 4.9e-07 4.7e-05 24.6 1.4 3 23 1899 1919 1898 1919 0.98

19 22 0.049 4.7 8.9 0.4 1 23 1937 1959 1937 1960 0.95

20 22 0.23 22 6.8 0.0 1 23 1983 2005 1983 2005 0.97

21 22 0.034 3.2 9.4 0.6 1 23 2011 2034 2011 2034 0.95

22 22 0.00033 0.031 15.7 0.4 1 23 2042 2065 2042 2065 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.012	1.1	10.8	1.6	3	23	682	703	681	703	0.96
2	22	0.26	25	6.6	0.3	1	22	1089	1110	1089	1110	0.95
3	22	0.0043	0.41	12.2	4.0	2	22	1185	1205	1184	1205	0.93
4	22	0.11	11	7.7	0.1	2	23	1213	1235	1212	1235	0.89
5	22	0.022	2.1	10.0	0.2	3	23	1256	1277	1254	1277	0.96
6	22	0.0013	0.12	13.9	3.4	1	23	1283	1306	1283	1306	0.95
7	22	0.16	15	7.3	0.0	1	23	1332	1355	1332	1355	0.90
8	22	0.023	2.2	9.9	3.4	1	23	1360	1382	1360	1382	0.97
9	22	0.011	1	11.0	0.2	1	23	1388	1411	1388	1411	0.95
10	22	0.005	0.47	12.0	0.8	1	23	1424	1446	1424	1446	0.97
11	22	0.00022	0.021	16.3	1.8	1	23	1496	1519	1496	1519	0.97
12	22	0.0014	0.13	13.8	1.1	1	23	1578	1601	1578	1601	0.96
13	22	0.0029	0.28	12.8	2.1	2	23	1629	1651	1628	1651	0.95
14	22	0.049	4.7	8.9	0.1	2	23	1657	1679	1656	1679	0.94
15	22	0.012	1.2	10.8	0.2	1	21	1723	1743	1723	1744	0.95
16	22	0.00052	0.049	15.1	1.0	1	23	1754	1776	1754	1776	0.93
17	22	0.00014	0.013	16.9	0.3	2	23	1870	1892	1870	1892	0.93
18	22	4.9e-07	4.7e-05	24.6	1.4	3	23	1899	1919	1898	1919	0.98
19	22	0.049	4.7	8.9	0.4	1	23	1937	1959	1937	1960	0.95
20	22	0.23	22	6.8	0.0	1	23	1983	2005	1983	2005	0.97
21	22	0.034	3.2	9.4	0.6	1	23	2011	2034	2011	2034	0.95
22	22	0.00033	0.031	15.7	0.4	1	23	2042	2065	2042	2065	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTAGAGATAAACGAAAATGACGACCTGCCCACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGcatgtttttaaaaatgtatgtgaaAGGACACAAAACAAACTACTGTCTCTGAAAGATGGCAGCCAACTAGAAGAGgtgaaaataaaaagtgaacCACTATCTGATGAAGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTggcttttcaaataaaatacaacctGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGATCCGCGAATGGATTGGCATCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTAATTGACTCTCTGCAGACGAAGGAAGAGTGTGATGTTTTGCAGCGTTCTGATCATGAATCTGACTCAGAAGCTGAACTCCAACCAGAaattgatgatgattatgtgGATTGCAAAAGCGGAtacatttgcaaaaataaaaaaataatatcaaaagctCCAAAACTATCAACTTCAGCGAACAATGCCAGAATGAAAGAAGCCTTTAAACTCAGAAAGCGTAAATTAGATGTCCGTAAACATTGTTCACGACCTAAAAATGCGTGGCAGCTGTTATTCACCGATGACCTACTAGAATTGATTGTCTCTTCAACTAATGACAATATTGTGACAAATGGGAAAAGTTTCTCGGAGTCAACTAGCGTCAGCGAAATTAAAGCGCTTATCGCTGTTCTGTATCTGCACGGCATAATGCGACCGACGCATCAGAAATGTTCTGACCTTTGGAACAGCGAATGTGGCGTTCCTTGCATCAAGAATATCATGAAATATGAAAGGTTCAAATTCCTGCTTCAAAACATGAGCTTCGATAAGGAGGACGACGACAGTATAATACAGTTCGACATAATGAAGCGTATGCGTAAAGTGTTCGAAATCTTCGCCATGAATTGCAGAACATCTCACGAGATCGAGAATGTCGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATAGATAAGAAGCCGCTGAAGCGGGGAATAAAAATGGTATTGCTAGTTGATTCATCTACATTCTACGTGAGCAATTTGGATGTCATTACTGATCCTTATTTTGGCGCCGAAGAGATAACGAAAAAGTTGGTACAGCATTTAGCTGGAACTGGCAGATCCATCGTCATGGACAGTTGGTTTACATCTTTCTCGTTAATGGACAGCCTTAAAAATGAGTACCAGTTATATTCTATTGCAGCACTGAACCCGAATAGTGAAATGATTCCACCACTATTTTTATCTCAATACAGAAAAACTCGAACATTCATGTCTGGATTTATTGATGATGAAGTATCATTGACATCATACGTCAATGCTGAGGGGAAATCAGTAAATGTGTTATCAAATGAGCCAAGATATTACAGGAAAGGTCATATAAATCACACTACAGTTGTGTCGGTTTATAAGAAGACTCAGTCTGCTGTAGAAGTAGTGGATGTTCTCATGAATTACTACACTACAATGCAACATACAAATGATTGGACATTGTCTTTGTTCTTCACATTGCTGAATATTGCATCTGTGAACGCTCAAGTACTGTGGTGCTCCCAAAACTCGAATGTTACTCAGCGTCGCTTATTTATCAGAGATTTAGCTTTAGGGTTACTTGAACCAGAGGAAGAAAGAATGGGTGCAGAGAGCGAAAACaatgaagaagaagaggaagaagcgAATGAGCCCCCACAAAAATTCCCGAAAATGCCCAACATGCCCGAGGTGTCCATCACGGTCATGAGACCAACTGGCGAGACCCTGCATGCTCGCCAAGGAATTCATCAACTCGCCTCCAAACTGTGCCTTGTCTGTGGCCGCTCGTACAGGTACTCTCATAACGCACGCAGACATGAACTTACCTCTCACGGTTTCGACAGATATACAAACAAAGTCACTCCTAAAAAAACCCTTAATCATCTACAACCCAAACTTAGACCGAACCCATTCAACCCTAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCATGAATAAGAACATGCCAACAAAAATAATGCCCATGAACAAAGTTATAATGCCACAGAAACCCATTCCAATTAAAACAACAacgaaaacacaaaacaatttgcCTTATCCTCTTCGTATTAAAGCACTTAAAGATTTACAAATTAAGAAAAAGGAGCCTCAAATTCTAAAGACTTTATTAACTTCTAAACCCGAAGTTCTGGTATCAGAACCAGAAATTCTGAATTCTGGGCCTGAAAGTCCAGAAACATTGATATCTGAGCCTGAAATTGCGTCTTTTCAAGTCGAAGCTATTCTTACGGAACCAGACGCCGACGCATATGATGATCCTGAACAAGGTGACGAAGAAGTTGATGAAGAAATGCAGAACAATCAAAGTCAAAACTATGACACTGTAGATATGGACTCTGAAAACGAAATAGAAATAGCTCGTCAACAAAGCATTGAACATGATGGCGAGGAAAATGCTGATGGGGATGAGAATATCGaccatgatgatgataacaataTGGAAGGCGCACAGAGTGATAACGAGAAAGATGGCAATGACGATACTGTTGAAAGTCAAGAGAACATGGATGAAGAAGATAGCATGGAAGTCAAACCTGAAGATCAAATGAAGGACGACGAGGAACAAGAAGAGGGAGAACAGGAAGAAGTAGAGATGAATCATAACGAGAACGACGATGATGACGACGATGAGCTTCCACTATCATTAGCGCCAGTCGTCGAGATAAATGAAGGATTGCAAGTTAACTCGTTTAACAGTGAAGCCAATGAAGAAGACGAGGAACTCGATGAAACTGTCGACCCTAATGACACCATCGAAGATGATGAGCAGCAGGTTAAGGAGCTCGACCCTGACAAAACATATGTTACAAAAACCCAAAGAGACTTCATCCAAAAATATCGCGACATCATTCAGCAAATCAACACGAAACGGTGTTTGTGTTGTGATCGCGAACATCCACGACGAAAAGCTGTAATACAACACTTGCAGAAAAACGGACATAAAGTACCAAAGCACACTTGTTATAATTGTGTCATCACTTTCGGACATATTGGCGCGCTACTCAGCCATATGAGGTCAAATTCTTGTACCAATTTGTGGAAGATTATTTACAATGAAAATGGAATTACGGACGACTTGGTACTCGAAGATGAGCCTAAAGAAGTCAAGGTTGCTTACAAAGATATTTTCAATGCCAGATCATATGCTTGTAAGCTTTGCCCAGCTAAATTCCAACTGAAACAGTTTATTATGAAGCATGTAGCAGATACTCATGAAGATGGACAATCTAGAGTTCCACTTTGTTGTGTCCACTGCCGTGCTAGGTTCAAAGACAAGAGTTTACTTAAGAAACATATTCGTAAAGGTGATTGCACAGTTTATATATCTTGTGATTTGTGTTCTGAAACGTTCAGGAATATGCAAGACTTTAACGACCATGCGTTAGCGATCCACGCTGGCAGTTTCGATCAGTCTGATAATCAGAGCAAATGTGTTGACGGTCGACCAACAGACTGTCCTTTGTGCGGGAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATACACGCCGAGGAGAAACCTCATTACTGCCAACATTGCGACGCTAAATTCGAACAATCTAACGATCTGAACAAACACATTTACATGGAGCATTCGGACAGAACATTAGGCATGCCGCCTGCTGAGCCGGATATGTCCATAGTGAAAGAAGAAGCTGAGGAGTATCATTACTCCTGCACAGAATGTAATGCCATTTTCGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCGGAGCATAACCAAGTGGCCCACCACTGCGACCAGTGTGAGAAGAAATTCCTGCGTCCTTCAGAGCTGGCAGAGCATAAGAACACTCACTTAAGGGTTAAGTTCTATCCTTGCAGTGTATGCCCCAACTCTTACAGCACTCCACAGAAACTGTCTGAGCATGTGCAACAGTCGCATCCAGGTATTGGCGCAATCGCGGCAGCTGAGTCTGAATTCTTCTGCGACATCTGCATCAGAGCGTTCAAGAGTCGCCAAGCTTACTCCAATCATATGCGTATTCACGCTAAAGTACCTACTACTAACAGAAAACCAACCACTGCCAAAGACGGGTTTTCACCTCAAATTATCGGGAAACCTATCAAACAATATCCTATGGTTCAACCTGGATTTGTATCATTTAAACCTAACTACAACATCCCTAACGCTCCATATTCCTGTGACATTTGTGGTAAAGGATTCATGCACAAGAAGAATATATGGAAACACAAGAAAGTGTTGCATGCCGATATTTTAGTTGACAGACATGATAGCGAAGAGAACACTATGCAAGCATCCACCGAAGAGGATGAATTCAATCCTGATGAGAATGGTTCTATCCTCTCAACACCACAATTTAATAGTTTCAACTTTACGAACTTCCCGAACAATACTCAACAAACCCCACCAGAAATGCCTTATGAATGTGATTTATGTAGTAAACGGTTTCCGCTTAGGACTAGTTTGTGGAAACATAAGCGCGCTAAACACGGAATTGTAAACCCTAGCACTAGTGGTAGCATCGATACACAAGCCGCGCCATCCGCTAGCGGAGAAGGAAGTAGCAGGTCAAGCTGCACTATATGTAGAATCACATTTTCAGACAAGAAATCTTATTACCGCCATCGAAAGAATGTCCACAAATCTACTGTTCAAATGTGTAAAATATGTGGCAAACCATTAAGTTCAACTTTGGAACTGTACGAGCACTTGAAAGCTGCTCATGCAAGGGAATTGCTGGGTTATAACGCTAACCAAGGTTCCAGTAAATCACAAGATGTGACACCAGAAATTGAACCTGATTATGAAAATGACACGGAGGCTGCCGACCCTAGTGTCGATTACCAAGCCCGCTACCCTTGCGATACTTGTGGCAAACAATTTGTTGGTCTATTGGCATTACAGAATCACCAGTGCATCAACCAGGTGCCATCACAGCCTCAGACGTTTGACTGTGAAATTTGCCACAAGAGTTACACTTCTATATCTGCATTAAAAAGTCATCGTGGATGGCATTTACGTTCACCCGATGGAAAGGCAGCCGCCAATAACTCTGGCCTTTGGATGCCTCAGCACAAAGTTACTAGCAAGATAAGTAAACACGAAGTCATCGACCCGTCTCAACTGGCGAAGGTCACACATACTCCTACTCCCCCTCCAGTAGTAACAGCGACCGTAGCGAAAAGAAGACTACCGCCAGAGGTTGAAGTGActgtcgtaaatccaaacaagAAATTACGCTCAGACGACTCTGTCGACATGGATTTACAAAACTCTGGTACAATCGAGGATAGGTACTGTACGATTTGCGACAAGGAATTTACAAAACGAGCGGCGTACCAGCGTCACATGGACGAAGTACATCAGCCGAACTCTGTGTTTTGTCCGGTCTGTGATAAGAGTTTTACAAGGAAGTCCACATTGCTCATTCACATGAAGAAACACTACGAGAGCGGTGAGGGCAGTTCATCAGCTACAGGTCAAGGTGACGATGATTTCTCGTGTGATTTGTGTGGCGCTCAGTACGACAGTGATCAGGCGTTGAGGGCGCACCGGGCGCGGCACCATGGAGAAGATGAAGAGTCGGCAGAAGAGAGTGATGATGGAAATGTTCCCATAGCTCCTCCCGGCGAATTTACATGTGCGCAATGCGGCGATGGAGTCGCTACTCCCAGGGACCTTATCGCCCATCGCACAATGCATGCAACTCCCACCAAATTCTTCTGTAACATTTGCAAAGTGTACTTCGCTCGGGCGCTCGACCTCTCGTCGCATACTCGGGCGCGACATGCAGACAACGAAAAGGTATTCTTCCCTTGTGCCATGTGCGATAGGTTTTACATGAACAAGAAGAGTTTACAGCGGCACATCGAGATGGTTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVEINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLLSLKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYPVIENAGFSNKIQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDVLQRSDHESDSEAELQPEIDDDYVDCKSGYICKNKKIISKAPKLSTSANNARMKEAFKLRKRKLDVRKHCSRPKNAWQLLFTDDLLELIVSSTNDNIVTNGKSFSESTSVSEIKALIAVLYLHGIMRPTHQKCSDLWNSECGVPCIKNIMKYERFKFLLQNMSFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYVSNLDVITDPYFGAEEITKKLVQHLAGTGRSIVMDSWFTSFSLMDSLKNEYQLYSIAALNPNSEMIPPLFLSQYRKTRTFMSGFIDDEVSLTSYVNAEGKSVNVLSNEPRYYRKGHINHTTVVSVYKKTQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWCSQNSNVTQRRLFIRDLALGLLEPEEERMGAESENNEEEEEEANEPPQKFPKMPNMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHGFDRYTNKVTPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFMNKNMPTKIMPMNKVIMPQKPIPIKTTTKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPEQGDEEVDEEMQNNQSQNYDTVDMDSENEIEIARQQSIEHDGEENADGDENIDHDDDNNMEGAQSDNEKDGNDDTVESQENMDEEDSMEVKPEDQMKDDEEQEEGEQEEVEMNHNENDDDDDDELPLSLAPVVEINEGLQVNSFNSEANEEDEELDETVDPNDTIEDDEQQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVADTHEDGQSRVPLCCVHCRARFKDKSLLKKHIRKGDCTVYISCDLCSETFRNMQDFNDHALAIHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKFEQSNDLNKHIYMEHSDRTLGMPPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAIAAAESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPTTAKDGFSPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEDEFNPDENGSILSTPQFNSFNFTNFPNNTQQTPPEMPYECDLCSKRFPLRTSLWKHKRAKHGIVNPSTSGSIDTQAAPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDVTPEIEPDYENDTEAADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHTPTPPPVVTATVAKRRLPPEVEVTVVNPNKKLRSDDSVDMDLQNSGTIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDFSCDLCGAQYDSDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -