Basic Information

Insect: Apamea epomidion
Gene Symbol: Zfa_1
Assembly: GCA_947507525.1
Location: OX382234.1:6717359-6725974[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.01 0.71 10.8 1.6 3 23 699 720 698 720 0.96

2 23 0.22 16 6.6 0.3 1 22 1103 1124 1103 1124 0.95

3 23 7.8 5.6e+02 1.7 0.4 1 22 1166 1187 1166 1189 0.82

4 23 0.017 1.2 10.1 4.8 2 22 1199 1219 1198 1219 0.93

5 23 2.3 1.6e+02 3.4 0.0 3 23 1228 1249 1226 1249 0.89

6 23 0.018 1.3 10.0 0.2 3 23 1270 1291 1268 1291 0.96

7 23 0.0035 0.25 12.3 2.5 1 23 1297 1320 1297 1320 0.95

8 23 0.13 9.3 7.3 0.0 1 23 1346 1369 1346 1369 0.90

9 23 0.02 1.4 9.9 3.4 1 23 1374 1396 1374 1396 0.97

10 23 0.009 0.64 11.0 0.2 1 23 1402 1425 1402 1425 0.95

11 23 0.0042 0.3 12.0 0.8 1 23 1438 1460 1438 1460 0.97

12 23 0.00019 0.013 16.3 1.8 1 23 1510 1533 1510 1533 0.97

13 23 0.0028 0.2 12.6 0.9 1 23 1595 1618 1595 1618 0.95

14 23 0.0025 0.18 12.7 2.1 2 23 1645 1667 1644 1667 0.95

15 23 0.041 2.9 8.9 0.1 2 23 1673 1695 1672 1695 0.94

16 23 0.01 0.74 10.8 0.2 1 21 1739 1759 1739 1760 0.95

17 23 0.00044 0.031 15.1 1.0 1 23 1770 1792 1770 1792 0.93

18 23 0.00012 0.0083 16.9 0.3 2 23 1885 1907 1885 1907 0.93

19 23 4.1e-07 2.9e-05 24.6 1.4 3 23 1914 1934 1913 1934 0.98

20 23 0.023 1.6 9.7 0.3 1 23 1952 1974 1952 1975 0.95

21 23 0.13 9 7.4 0.0 1 23 1998 2020 1998 2020 0.97

22 23 0.029 2 9.4 0.6 1 23 2026 2049 2026 2049 0.95

23 23 0.00027 0.019 15.8 0.4 1 23 2057 2080 2057 2080 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.01	0.71	10.8	1.6	3	23	699	720	698	720	0.96
2	23	0.22	16	6.6	0.3	1	22	1103	1124	1103	1124	0.95
3	23	7.8	5.6e+02	1.7	0.4	1	22	1166	1187	1166	1189	0.82
4	23	0.017	1.2	10.1	4.8	2	22	1199	1219	1198	1219	0.93
5	23	2.3	1.6e+02	3.4	0.0	3	23	1228	1249	1226	1249	0.89
6	23	0.018	1.3	10.0	0.2	3	23	1270	1291	1268	1291	0.96
7	23	0.0035	0.25	12.3	2.5	1	23	1297	1320	1297	1320	0.95
8	23	0.13	9.3	7.3	0.0	1	23	1346	1369	1346	1369	0.90
9	23	0.02	1.4	9.9	3.4	1	23	1374	1396	1374	1396	0.97
10	23	0.009	0.64	11.0	0.2	1	23	1402	1425	1402	1425	0.95
11	23	0.0042	0.3	12.0	0.8	1	23	1438	1460	1438	1460	0.97
12	23	0.00019	0.013	16.3	1.8	1	23	1510	1533	1510	1533	0.97
13	23	0.0028	0.2	12.6	0.9	1	23	1595	1618	1595	1618	0.95
14	23	0.0025	0.18	12.7	2.1	2	23	1645	1667	1644	1667	0.95
15	23	0.041	2.9	8.9	0.1	2	23	1673	1695	1672	1695	0.94
16	23	0.01	0.74	10.8	0.2	1	21	1739	1759	1739	1760	0.95
17	23	0.00044	0.031	15.1	1.0	1	23	1770	1792	1770	1792	0.93
18	23	0.00012	0.0083	16.9	0.3	2	23	1885	1907	1885	1907	0.93
19	23	4.1e-07	2.9e-05	24.6	1.4	3	23	1914	1934	1913	1934	0.98
20	23	0.023	1.6	9.7	0.3	1	23	1952	1974	1952	1975	0.95
21	23	0.13	9	7.4	0.0	1	23	1998	2020	1998	2020	0.97
22	23	0.029	2	9.4	0.6	1	23	2026	2049	2026	2049	0.95
23	23	0.00027	0.019	15.8	0.4	1	23	2057	2080	2057	2080	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGACGACCTGCCCACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATGTTTTTAAAAATGTTTGTGAAAGGACACAAAACAAACTACAGTCTCTAAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAACCACTATCTGATGGGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGTCATTGAGAATGCTGGCTTCTCAAACAAAGTACAACCTGAAGGTCCCCCAATCTTGGCTTCGTTGGGGCTCACACCAAGAAGTGATAAGAAATGTGTGGACCCGCGAATGGATTGGCATCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTGCAGACAAAGGAAGAGTGTGATGTTTTGCAACATTCTGATCATGACTCAGACACAGAAGCCGAACTCCAACCAGAAATTGATGATGATTACGTTGATTGCAAAAGCGGATACATATGCAAAAATAAAAAAGTTATATCAAAAGTTCCAAAACTATCAACTTCTGTAAATAATGCCAGAGTCAAAGAAGCTTTCCAACTTAGGAAACGCAAATCAGAAGTTCGTAAACATTGTTCACGACCCAAAAATGCGTGGCAGTTGTTATTCACCGATGACCTACTAGAATTGATTGTTGCTTCTACTAATGACAATATTGTGACAAATGGGAAAAGTTTCACGGAGTCAACCAGTGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATCTGCACGGCATAATGCGGCCGACGCATCAGAAATGCAATGACCTTTGGAACAGTGAATGTGGTGTTCCTTGCGTCAGAAATATCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATGAGCTTCGATAAAGAGGACGACGATAGCATTATACAGTTCGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTCGCAATGAATTGCAGAACATCTCACGACATCGAGAATGTCGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATTGATAAGAAGCCGCTGAAGCGGGGCATAAAGATGGTATTGCTAGTTGATTCATCCACTTTCTATATGAGCAATTTAGACGTCATTACTGATCCTTATTTTGGCCCGGAAGAGATAACGAAAAAGTTGGTTCAGCATTTAGCTGGAACTGGCAGATCTATTGTTATGGATAGTTGGTTCACATCTCCCTCATTGATGGATAGCCTTAAAAATGAGTACCAGTTGTATTCTATTGCGGCCTTGCACCCAAACAATGATATGATTCCGCCACTATTCCTATCTCAATACAGGAAATGTCGGACATTTATGTCTGGATTTATTGATCATGAAGTATCACTGACATCTTATGTCAATACTGAAGGGAAATCAGTTAATGTATTGACTAACGAGCCTAGATATTACAGGAAAGGTCATATAAATCACACTACAGTTGTATCGGTGTATAAGAAGAATCAGTCTGCCGTAGGAGTAGTGGATGTTCTCATGAATTACTACACTACAATGCAACACACAAATGATTGGACACTCTCCTTATTCTTTACATTGCTGAATATTGCCTCTGTTAATGCTCAAGTCTTGTGGTGCTCTCAAAACTCGAATGGATTGCAGCGTCGCTTATTTATTAAAGATCTAGCTTTAAGTTTACTAGAACCAGATGAGGAAAGAATGTTAATTTCTCCGATAAGCGATTTAGAGGAGAGGAAAAACAAATTTTCTCTTGGTGCGGAGAGTGAGAACAATGAAGAAGACGAGGAAGAAATGAACGAGCCCGCACAAAATTTCCCGAAAATGCCCCACATGCCCGAGGTGTCCATCACGGTGATGAGGCCTACTGGTGAAACCCTGCATGCTCGCCAAGGTATTCACCAACTCGCCTCCAAACTGTGCCTCGTCTGCGGCCGCTCCTACAGGTACTCCCACAACGCACGCAGACATGAACTTACGTCTCACAGTTTCGACAGATATACAAACAAAATTACTCCTAAAAAAACCCTCAATCATCTACAACCCAAACTCAGACCGAACCCATTCAATCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCTTTAACAAGAACATGTCCACAAAAATAATGCCCATAAATAAAGTTATAACGCCACAGAAACCCATTCCAATAAAGACGTCAAAGACACAAAATAATTTGCCTTATCCTCTACGTATCAAAGCACTCAAAGATTTACAAATTAAGAAAAAGGAGCCTCAAATTCTGAAGACTTTGTTAACCTCCAAACCTGAAGTTCTGGTTTCCGAACCAGAAATTTTAAATTCTGGGCCTGAAAGTCCAGAAACATTGATATCTGAGCCTGAAATTGCGTCTTTTCAAGTCGAAGCTATTCTTACGGAACCCGATGCCGATGCATACGATGATCCACAACAAGGCGACGAAGAAGTTGATGAAGAAATGCAGAACAATCAAAGTCAAAACTATGACACAGTCGATATGGACTCTGAGAATGAAATAGAAATTGCTCGTCAGCACGGCATTGAACACGAGGGTGAGGAAATAGTTGATGGGGAAGAGAATATCGACCATGACGATGATAATAATATAGAAGGCACTCAGAGCGATAACGAGAAAGACGGCAATGACGATACAGCTGAAAGTCAAGAGAACATGGAAGAAGAAGATAGTGTTGATATTAAACCTGAAGACCAAATGAAGGACGACGAAGTCCAAGAGGAGGTAGAACACGAAGAATTAGAAATGAATCACAACGAAAATGAGGAAGAAGACGATGACCTGCCAATGACATTAGCGCCCGTCGTCGAAATAAGTGAGGGGTTGCAAGCCGACTCGTTTAACAGCGAAGTCAATGAAGATGACGAGGAACTCGATGAAACTGTCGATACCAATGAAACCATTGAAGATGAGGAGCAAGTCAAAGAACTTGACCCTGACAAAACATATGTTACGAAAACCCAAAGAGACTTCATCCAGAAATATCGCGACATAATTCAGCAAATTAACACGAAGCGTTGTTTATGTTGCGATCGAGAACATCCGCGCAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGACATAAGGTACCAAAACACACTTGTTACAACTGTGTCATCACATTCGGACATATTGGCGCTCTACTTAGTCATATGAGGTCGAATTCTTGCACTAATTTGTGGAAGATTATTTATAATGAAAATGGCATTACTGACGACTTAGTTCTCGAAGATGAGCCGAAAGAGGTCAAGGTTGCATACAAAGATATTTTCAATGCCAGGTCATACGCTTGCAAACTCTGTCCTGCTAAGTTCCAACTGAAACAGTTTATTATGAAGCATGTTTTAGATACTCATGAGGACGGCCAGTCAAGGGTGCCGCTCTGTTGTGTCCACTGCCGTTCTAGGTTCAAAGATAAGAGCTTACTAAAGAAACACATTCGTAAAGGTGATTGTACAGTTTATATAGCTTGCGATTTGTGCTCAGAAAAGTTCGGAAACATGCAGGACTTCAACGACCATGCGCTAGCTATCCATGCGGGCAGTTTCGATCAGTCGGATAATCACAACAAATGTGTTGACGGTCGACCAACAGACTGTCCCTTGTGCGGAAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACATTTGAAGATTATCCATGCGGAAGAGAAACCTCACTACTGCCAGCATTGCGATGCTAAATACGAACAAGCTACTGATCTGAACAAACACATTTATATGGAGCATTCTGACAGAACATTGGGCATGGCGCCTGCTGAACCAGATATGTCCATAGTTAAGGAAGAAGCAGAGGAGTACCATTACTCCTGTACGGAATGTAATGCCATATTCGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCCGAACATAACCAAGTGGCCCACCACTGTGACCAGTGTGAAAAGAAATTCCTTCGTCCTTCAGAGCTGGCAGAGCACAAGAACACTCATTTGAGGGTTAAGTTCTATCCGTGTAGTGTATGTCCCAACTCATACAGCACTCCACAAAAACTGTCTGAGCATGTACAGCAGTCACATCCAGGGATTGGCGCAGTCGCGGCAACTGAATCGGAATTCTTCTGCGATATCTGTATCAGAGCATTCAAAAGTCGCCAAGCTTACTCAAATCATATGCGTATTCACGCTAAAGTACCTACTACAAACAGGAAACCAGCTCCAGGTAAGGAGGGATTCGCACCTCAAATTATCGGGAAACCTATCAAACAATATCCTATGGTTCAACCTGGTTTTGTGTCATTTAAACCTAATTACAACATCCCCAACGCTCCTTATTCATGTGACATTTGTGGTAAAGGATTCATGCACAAGAAGAATATATGGAAACACAAGAAAGTGTTGCATGCCGACATTTTAGTCGATAGACATGACAGTGAAGAGAACACTATGCAGGCTTCCACTGAAGAGGAGGAATTCAACCCTGATGAGAATGGTGCCGTTCTCTCAACGCCACAATTTAATAGTTTTATTAACTTTACGAACTTCCCGAACAATGCTCAACAAACGCCATCACAAGATACAATGCCTTATGCGTGTGATTTATGCAGCAAACGGTTCCCGCTTAGGACCAGTTTGTGGAAACACAAGCGCGCTAAACACGGAATCGTAAACCCTAGCGCTAATAGTAGCAACGATACATCCACACCGTCCGCTAGTGGGGAAGGCAGTAGTAGATCTAGCTGCACTATATGTAGAATCACATTTTCAGATAAGAAATCTTATTATCGTCATCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAAATATGTGGTAAGCCGCTAAGTTCAACTTTGGAACTGTACGAGCACTTGAAAGCCGCTCATGCAAGGGAACTACTGGGTTATAATGCTAACCAAGGCTCCAGTAAATCACAAGAAGTGTCACAAGATATTGAACCCGATTATGAAAATGATCAGGAGTCTGTCGATCCCAGCGTCGATTACCAAGCGCGCTACCCGTGCGATACTTGTGGCAAACAGTTTGTGGGCTTGCTAGCGTTGCAAAACCACCAGTGCATCAATCAGATACAATCACAACCACAGACGTTTGACTGCGAAATTTGTCACAAGAGCTACACTTCAATATCCGCGCTAAAAAGCCATCGTGGGTGGCATTTACGTTCACCTGATGGAAAAGCAGCCGCCAACAATTCTGGCCTATGGATGCCCCAGCACAAAGTTACTAGCAAGATAAGCAAACATGAGGTCGTCGACCCGTCACAACTTGCTAAGGTCACACATACCCCCACTCCCCCTCCTGTCACTGCAACCGCAGCGAAAAGAAGACTACCACCAGAGGTCGAAGTGACAGTCGTAAATCCAAACAAGAAACTGCGCTCAGACGACTCGGTCGACCTGGATATGCAAAGTACTGGTGCAATCGAGGATAGGTACTGTACGATTTGCGACAAGGAATTTACAAAACGCGCGGCGTATCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTATTTTGCCCGGTCTGTGATAAGAGTTTTACAAGGAAATCCACATTGCTCATTCACATGAAGAAACACTACGAGAGCGGTGAGGGTAGTTCCTCTGCTACAGGCCAAGGAGACGATGATTACTCCTGTGATTTGTGTGGCGCTCAGTATGACAATGATCAGGCGTTGCGTGCGCACCGAGCGCGGCACCATGGAGAAGATGAAGAGTCGGCGGAAGAGAGTGACGACGGAAATGTTCCTATTGCTCCTCCCGGTGAGTTCACCTGTGGGCAATGCGGCGACGGCGTGGCTACACCAAGAGACCTCATCGCTCATCGCACAATGCACGCTACTCCCACCAAATTCTTCTGTAACATATGCAAAGTGTACTTCGCTCGGGCGCTCGACCTCTCCTCGCACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGGTTTTACATGAACAAGAAGAGTTTACAGCGGCACATTGAGATGGCGCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLQSLKDGSQLEEVKIKSEPLSDGAYDDGVVIDGSYPVIENAGFSNKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDNEVIDSLQTKEECDVLQHSDHDSDTEAELQPEIDDDYVDCKSGYICKNKKVISKVPKLSTSVNNARVKEAFQLRKRKSEVRKHCSRPKNAWQLLFTDDLLELIVASTNDNIVTNGKSFTESTSVSEIKTLIGILYLHGIMRPTHQKCNDLWNSECGVPCVRNIMKYERFKFLLQNMSFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTSHDIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGPEEITKKLVQHLAGTGRSIVMDSWFTSPSLMDSLKNEYQLYSIAALHPNNDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSVNVLTNEPRYYRKGHINHTTVVSVYKKNQSAVGVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWCSQNSNGLQRRLFIKDLALSLLEPDEERMLISPISDLEERKNKFSLGAESENNEEDEEEMNEPAQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFFNKNMSTKIMPINKVITPQKPIPIKTSKTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPQQGDEEVDEEMQNNQSQNYDTVDMDSENEIEIARQHGIEHEGEEIVDGEENIDHDDDNNIEGTQSDNEKDGNDDTAESQENMEEEDSVDIKPEDQMKDDEVQEEVEHEELEMNHNENEEEDDDLPMTLAPVVEISEGLQADSFNSEVNEDDEELDETVDTNETIEDEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCSEKFGNMQDFNDHALAIHAGSFDQSDNHNKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATDLNKHIYMEHSDRTLGMAPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAATESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPAPGKEGFAPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFINFTNFPNNAQQTPSQDTMPYACDLCSKRFPLRTSLWKHKRAKHGIVNPSANSSNDTSTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQEVSQDIEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDPSQLAKVTHTPTPPPVTATAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQSTGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017541;
90% Identity: iTF_00758469;
80% Identity: -