Gfla008976.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gortyna flavago
Gene Symbol
Zfa
Assembly
GCA_963669345.1
Location
OY770132.1:14241480-14250060[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.011 0.91 10.9 1.6 3 23 646 667 645 667 0.96
2 23 0.25 20 6.7 0.3 1 22 1051 1072 1051 1072 0.95
3 23 8.8 7.2e+02 1.8 0.4 1 22 1114 1135 1114 1137 0.82
4 23 0.019 1.6 10.1 4.8 2 22 1147 1167 1146 1167 0.93
5 23 2.6 2.1e+02 3.5 0.0 3 23 1176 1197 1174 1197 0.89
6 23 0.021 1.7 10.0 0.2 3 23 1218 1239 1216 1239 0.96
7 23 0.0039 0.32 12.3 2.5 1 23 1245 1268 1245 1268 0.95
8 23 0.15 12 7.4 0.0 1 23 1294 1317 1294 1317 0.90
9 23 0.022 1.8 9.9 3.4 1 23 1322 1344 1322 1344 0.97
10 23 0.01 0.82 11.0 0.2 1 23 1350 1373 1350 1373 0.95
11 23 0.0047 0.38 12.1 0.8 1 23 1386 1408 1386 1408 0.97
12 23 0.00021 0.017 16.3 1.8 1 23 1459 1482 1459 1482 0.97
13 23 0.0031 0.25 12.6 0.9 1 23 1544 1567 1544 1567 0.95
14 23 0.0028 0.23 12.8 2.1 2 23 1594 1616 1593 1616 0.95
15 23 0.047 3.8 8.9 0.1 2 23 1622 1644 1621 1644 0.94
16 23 0.012 0.95 10.8 0.2 1 21 1688 1708 1688 1709 0.95
17 23 0.00049 0.04 15.1 1.0 1 23 1719 1741 1719 1741 0.93
18 23 0.00013 0.011 16.9 0.3 2 23 1834 1856 1834 1856 0.93
19 23 4.7e-07 3.8e-05 24.7 1.4 3 23 1863 1883 1862 1883 0.98
20 23 0.026 2.1 9.7 0.3 1 23 1901 1923 1901 1924 0.95
21 23 0.22 18 6.8 0.0 1 23 1947 1969 1947 1969 0.97
22 23 0.032 2.6 9.4 0.6 1 23 1975 1998 1975 1998 0.95
23 23 0.0003 0.024 15.8 0.4 1 23 2006 2029 2006 2029 0.96

Sequence Information

Coding Sequence
ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTTGAAAATCAAGGATTGTGTGTCCGTACAGATAAACGAAAATGATGACCTGCCTACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCatgtttttaaaaatgtatgtgaAAGGACACAAAACAAACTACAGTCTCTAAAAGATGGCAGCCAACTAGAAGAGgtgaaaataaaaagtgaacCACTCTCTGATGGGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGGCATTGAGAATGCTGGCTTCTCAAACAAACTACAACCTGAAGGTCCCCCAATCTTGGCTTCGTTGGGTCTCACACCAAGAAGTGATAAGAAATGTGTAGACCCACGGTTGGATTGGCATCGGGTCCATGCAATTTTGGACATGGTTCAAGACAATGAGGTGATAGACTCTCTGCAGACAAAGGAAGAATGTGATGTTTTGCAACATTCTGATCATGATTCGGATACAGAAGCCGAACTCCAACCAGAAATTGATGATCATTACGTTGATTGCAAAAGTGGATACatatgcaaaaataaaaaaattatatcaaaagtTCCTAAACTATCAACTTCTTTAAATAATGCCAGAGTCAAAGAAGCTTTCAAACTTAGGAAACGCAAATCAGAAGTTCGTAAACATTGTTCACGACCTAAAAATGCATGGCAGTTGTTATTCACCGATGACCTACTAGAATTGATTGTTGCTTCTACTAATAACAATATTGTGACAAATGGGAAAGGTTTCATGGAGTCAACTAGTGTCAGCGAAATTAAAACGCTTATCGGTATTCTGTATCTGCACGGCATCATGCGGCCGACGCATCAGACATGCAGTGACCTTTGGAACAGTGAATTTGGTGTTCCTTGCGTCAGAAACATCATGAAATACGAAAGGTTCAAATTCCTGCTTCAAAACATGAGCTTCGATAAAGAGGACGACGAGAGCATTATACAGTTCGACATAATGAAGCGTATGCGTAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACATCTCACGAGATCGAGAATGTCGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATACGATATTGATAAGAAGCCGCTGAAGCGGGGCATAAAGATGGTATTGCTAGTTGATTCATCCACTTTCTATATGAGCAATTTAGACGTCATTACTGATCCTTATTTTGGCGCCGAAGAGATAACGAAAAAGGTGGTTCAGCATTTAGCTGGAACTGGCAGATCTATTGTTATGGATAGTTGGTTCACATCTTCCTCATTGATGGATAGCCTTAGAAATGAATACCAGTTGTATTCTATCGCGGCCTTGAACCCAAACAGTGATATGATTCCGCCACTATTCCTATCTCAATATAGGAAATGTCGAACATTCATGTCTGGATTTATTGATCATGAAGTATCACTGACATCTTATGTCAATACTGAGGGGAAATCAGTAAATGTATTAACCAATGAGCCTAGATATTACAGGAAAGGTCATATAAACCACACTACAGTTGTATCAGTGTATAAGAAGAATCAGTCTGCCGTAGAAGTTGTGGATGTTCTCATGAACTACTACACTACAATGCAACACACAAATGATTGGGCATTGTCTTTATTCTTTACATTGCTGAATATTGCCTCTGGTGCGGAGAGTGAAAACAATGAAGAAGACGAGGAAGAAATGAACGAGCCCTCACAAAATTTCCCGAAAATGCCCCACATGCCTGAGGTATCCATCACGGTGATGAGGCCTACCGGTGAAACCCTGCATGCTCGCCAAGGTATTCACCAACTCGCCTCCAAACTGTGCCTCGTCTGCGGGCGCTCCTACAGGTACTCCCACAACGCACGCAGACATGAACTTACCTCTCACAGCTTCGAcagatatacaaataaaattactcCTAAAAAAACCCTCAATCATCTACAACCCAAACTCAGACCGAACCCATTCAATCCCAAAGCACGGATGATGCCGAATCCTATTAGTCATAAGATGCAGTTCTTTAACAAGAACAtgtcaacaaaaataatgccCATAAACAAAGTTATAACGCCTCAGAAACCCATTCCAATAAAGACGTCGCAGACACAAAATAATTTGCCTTATCCTTTACGCATTAAAGCACTCAAAGATTTACAAATTAAGAAAAAGGAGCCTCAGATTCTGAAGACTTTGTTAACCTCTAAGCCTGAAGTTCTGGTTTCCGAACCAGAAATTCTTAATTCTGGGCCTGAAAGTCCAGAAACATTGATATCTGAGCCTGAAATTGCGTCTTTTCAAGTCGAAGCTATTCTTACGGAACCCGATGCCGATGCATACGATGATCCACAGCAAGGCGACGAAGAAGTTGATGAAGAAATGCAGAACAATCAAAGTCAAAACTATGACACAGTCGATATGGACTCTGAGAATGAAATAGAGATTGCTCGTCAGCACGGCATTGAACACGAAGGTGAAGAAATAGTTGATGGGGAAGAGAATATTGAccatgatgatgataataacatGGAAGGCGCTCAGAGCGATAACGAGAAAGACGGCAATGACGATACAGCTGAAAGTCAAGAGAAtatggaagaagaagatagTGTTGATATTAAACCTGAAGACCCAATGAAGGACGACGAAGGCCAAGAGGAGGGAGAACAcgaagaattagaaatgaatcACAACGAAAACGAGGAAGAAGACGATGATGACCTTCCAATATCCTTAGCGCCCGTCGTCGAAATAAGTGAGGGATTGCAAGCCGACTCTTTTAACAGCGAAGTCAATGAAGATGACGAGGAACTCGATGAAACTGTCGAAACCAATGAAGCCATTGAAGATGAGGAGCAAGTCAAAGAACTTGACCCCGACAAAACATATGTTACGAAAACCCAAAGAGACTTCATTCAGAAATATCGCGACATCATTCAGCAAATCAACACGAAGCGTTGTTTATGTTGCGATCGAGAACATCCGCGAAGAAAAGCTGTTATACAACACTTGCAGAAAAACGGACATAAGGTACCAAAACACACTTGTTACAATTGTGTCATCACGTTCGGACATATTGGCGCTCTACTCAGTCATATGAGGTCGAATTCTTGCACTAATTTgtggaaaattattttcaatgaaAATGGCATTACAGACGACTTGGTTCTCGAAGATGAGCCGAAAGAAGTTAAGGTTGCAtacaaagatatttttaatGCCAGGTCATACGCTTGCAAGCTCTGCCCAGCAAAATTTCAACTGAAACAGTTTATTATGAAGCATGTGTTGGATACTCATGAGGATGGTCAGTCTAGGGTGCCGCTCTGTTGTGTGCACTGCCGTTCTCGGTTCAAAGATAAAAGCTTATTAAAGAAACACATTCGTAAAGGTGATTGTACAGTTTATATTGCTTGCGATTTGTGCTCAGAAAAGTTCGGGAACATGCAGGACTTCAACGACCATGCGCTAGCTATCCACGCTGGCAGTTTCGATCAGTCAGATAATCAGAGCAAATGTGTTGACGGTCGACCAACAGACTGTCCCTTGTGCGGAAAGAAAAACAGCAGCTATCCGAATTTAGTGAAACACTTGAAAATTATACATGCAGAAGAGAAACCTCACTACTGCCAGCATTGCGACGCTAAATACGAACAAGCTACTGATCTAAACAAACACATTTACATGGAGCATTCTGACAGAACATTAGGCATGGCGCCCGCTGAACCGGATATGTCCATAGTTAAGGAAGAAGCAGAGGAGTACCACTACTCCTGTACGGAATGTAATGCCATATTTGAAACTGTTGATGCGTGGACTGATCACCAAGTCGCCGAACATAACCAAGTTGCCCATCACTGTGATCAGTGTGAAAAGAAATTCCTTCGTCCTTCAGAGCTGGCAGAGCATAAGAACACTCACTTGAGGGTTAAATTCTATCCTTGCAGTGTATGTCCTAACTCATACAGCACTCCACAAAAACTGTCTGAGCATGTGCAGCAGTCGCATCCAGGAATCGGCGCAGTTGCGGCAACTGAGTCGGAATTCTTCTGCGACATTTGTATCAGAGCATTCAAAAGTCGCCAAGCTTACTCAAATCACATGCGTATTCACgctaaagtacctactactaacAGGAAACCGGCTCCACCAGGTAAAGAGGGATTCGCACCTCAAATTATCGGGAAACCTATCAAACAATATCCTATGGTTCAACCTGGTTTTGTGTCATTTAAACCTAATTACAACATACCTAACGCTCCTTATTCGTGTGACATTTGTGGTAAAGGATTCATGCACAAGAAGAATATATGGAAACACAAGAAAGTGTTGCATGCCGATATTTTAGTCGATAGACATGACAGTGAAGAGAACACTATGCAAGCTTCCACCGAAGAAGAGGAATTCAACCCTGATGAGAATGGTGCCGTTCTCTCTACGCcacaatttaatagttttattaactttacgAACTTCTCGAACAATGCTCAACAAACGCCAACACAAGATACAATGCCTTATGCGTGTGATTTATGCAGCAAACGGTTCCCGCTTAGGACCAGTTTATGGAAACACAAGCGCGCTAAACACGGAATCCTAAACCCTAGCGCTAGTAGTAGCAATGATACATCCACGCCGTCCGCTAGTGTGGAAGGCAGTAGTAGATCTAGCTGCACTATATGTAGAATCACATTTTCAGATAAGAAATCTTATTATCGTCATCGAAAGAATGTCCACAAATCTACCGTTCAAATGTGCAAAATATGTGGCAAACCACTAAGTTCAACTTTGGAACTGTACGAGCACTTGAAGGCTGCTCATGCAAGGGAACTACTGGGTTATAATGCTAACCAAGGCTCCAGTAAATCACAAGATGTGTCACAAGAGATTGAACCCGATTATGAAAATGATCAGGAGTCTGTCGACCCCAGCGTCGATTACCAAGCGCGCTACCCGTGCGATACTTGTGGCAAACAATTTGTGGGTTTGCTAGCGTTGCAAAACCACCAGTGCATTAATCAGATACAATCACAACCACAGACGTTTGACTGCGAAATTTGTCACAAGAGCTACACTTCAATATCTGCGCTGAAAAGCCATCGTGGGTGGCATTTACGTTCACCAGATGGAAAAGCAGCCGCCAACAATTCTGGCCTATGGATGCCTCAGCACAAAGTTACTAGCAAAATAAGCAAACATGAGGTCGTCGACCCGTCACAACTTGCTAAAGTCACACATACCCCTACTCCCCCTCCTGTCACTGCTACCGCAGCAAAAAGAAGACTACCACCAGAGGTTGAAGTGACAGTCGTAAATCCAAACAAGAAACTGCGCTCAGACGACTCTGTCGACCTGGATATGCAAAGTACTGGTGCAATCGAGGATAGGTACTGTACGATTTGTGACAAGGAATTTACAAAACGCGCGGCGTATCAGCGCCACATGGACGAGGTACATCAACCGAACTCTGTATTTTGCCCGGTCTGTGATAAGAGTTTTACAAGGAAATCGACATTGCTCATTCACATGAAGAAACACTACGAGAGCGGTGAGGGCAGTTCCTCAGCCACAGGTCAAGGGGACGATGATTACTCCTGTGATTTGTGTGGGGCTCAGTATGACAATGATCAGGCGTTGAGGGCGCACCGAGCGCGGCACCATGGAGAAGATGAAGAGTCTGCAGAAGAGAGTGACGACGGAAATGTTCCTATTGCTCCGCCTGGTGAGTTCACCTGTGCGCAATGCGGCGATGGCGTGGCTACACCAAGAGACCTCATCGCCCATCGCACAATGCACGCTACTCCCACCAAATTCTTCTGTAACATATGCAAAGTGTACTTCGCTCGAGCGCTCGACCTCTCCTCGCACACTCGGGCGCGACACGCTGACAACGAAAAGGTATTCTTCCCGTGTGCCATGTGCGACAGGTTTTACATGAACAAGAAGAGTTTACAGCGGCACATCGAGATGGCGCACTGA
Protein Sequence
MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIKDCVSVQINENDDLPTNVCRKCMDNVNNWHVFKNVCERTQNKLQSLKDGSQLEEVKIKSEPLSDGAYDDGVVIDGSYPGIENAGFSNKLQPEGPPILASLGLTPRSDKKCVDPRLDWHRVHAILDMVQDNEVIDSLQTKEECDVLQHSDHDSDTEAELQPEIDDHYVDCKSGYICKNKKIISKVPKLSTSLNNARVKEAFKLRKRKSEVRKHCSRPKNAWQLLFTDDLLELIVASTNNNIVTNGKGFMESTSVSEIKTLIGILYLHGIMRPTHQTCSDLWNSEFGVPCVRNIMKYERFKFLLQNMSFDKEDDESIIQFDIMKRMRKVFEIFAMNCRTSHEIENVAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKVVQHLAGTGRSIVMDSWFTSSSLMDSLRNEYQLYSIAALNPNSDMIPPLFLSQYRKCRTFMSGFIDHEVSLTSYVNTEGKSVNVLTNEPRYYRKGHINHTTVVSVYKKNQSAVEVVDVLMNYYTTMQHTNDWALSLFFTLLNIASGAESENNEEDEEEMNEPSQNFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKLCLVCGRSYRYSHNARRHELTSHSFDRYTNKITPKKTLNHLQPKLRPNPFNPKARMMPNPISHKMQFFNKNMSTKIMPINKVITPQKPIPIKTSQTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILTEPDADAYDDPQQGDEEVDEEMQNNQSQNYDTVDMDSENEIEIARQHGIEHEGEEIVDGEENIDHDDDNNMEGAQSDNEKDGNDDTAESQENMEEEDSVDIKPEDPMKDDEGQEEGEHEELEMNHNENEEEDDDDLPISLAPVVEISEGLQADSFNSEVNEDDEELDETVETNEAIEDEEQVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIFNENGITDDLVLEDEPKEVKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLCCVHCRSRFKDKSLLKKHIRKGDCTVYIACDLCSEKFGNMQDFNDHALAIHAGSFDQSDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHAEEKPHYCQHCDAKYEQATDLNKHIYMEHSDRTLGMAPAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHPGIGAVAATESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPAPPGKEGFAPQIIGKPIKQYPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILVDRHDSEENTMQASTEEEEFNPDENGAVLSTPQFNSFINFTNFSNNAQQTPTQDTMPYACDLCSKRFPLRTSLWKHKRAKHGILNPSASSSNDTSTPSASVEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSSKSQDVSQEIEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVDPSQLAKVTHTPTPPPVTATAAKRRLPPEVEVTVVNPNKKLRSDDSVDLDMQSTGAIEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSATGQGDDDYSCDLCGAQYDNDQALRAHRARHHGEDEESAEESDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH