Pnig001224.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrausta nigrata
Gene Symbol
bab1
Assembly
GCA_949316185.1
Location
OX438936.1:21174163-21190527[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-17 2.4e-14 53.7 0.0 1 43 92 135 92 137 0.95

Sequence Information

Coding Sequence
ATGTCATACGGCGAGCCAGTCCTGTTGTTTAACCAAAAGAATGAAGTTTCACTGGTGTTGCTGCTGCTGAATCGGTTCTTTGATAGTCATAGCAAATACGTGACGGCCAAGCTTCTGGAGAACTCCCACGCATGGCTGGGCGCCTCCACGTCATCCATCGCAGCAGACAGCTACCAATACCAGCTGCAATCCATGTGGCAGAAGTGTTGGAACACCAATCAGAACCTGGTCCACAACCTTCGCTTTCGAGAGCGCGGGCCTCTGAAGTCCTGGAGACCAGAGACCATGGCTGAGGCCATATTCTCCGTGCTGAAGGAGGGCCTGTCCCTGTCGCAGGCGGCGAGGAAGTACGACATTCCGTACCCGACGTTCGTACTGTACGCCAACAGAGTACACAACATGCTGGGCCCCAGCGCCGATGGTGGTGCAGATTTGAGGCCGAAGGGGCGCGGGCGGCCGCAGCGCATCCTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTCATCCGCGCCGTCGTCTTCCGGGACACGCACACCCCGCACGCCTCCCACCACATCAAGGAGGAAGTCCTACCATACCCATCGATCACGGACGGCATGAGCGTGCCCAACGCGTACGGGAACGTCGCGTGCGGCAACGGGCGCGAGGGCGGCGTCTCGCCGAACGCTGCTGCCGCCGCCGCCGTCGCCGCAGTCGCGCACGGCCTGCGCCGGCAGATGTGCAACATGGTGGTCGCGGCGCAGCGCCCGCCCGACCACCCGCCGCACCTCGGCCTGCCGCCGCTGCCGCTGCAGTCCCCCCGCCTGCCGTCGCCGCTCTCCGCCGGCCTCGAGTCCCCGCTCTGCTCGCCACCGCCGCCCGGACACGCTCTCGAACCGCCGAAACCCGCAGACCCCTTCCGCCCCTTCGCCTCCCCCCGCCCCGACAGCCGCTACGGTGAGCGCGACGTTGTCGCCGAGATCACGGAAATGGGCCCTCCTAAGACGCCGGTGTCGATCGCCAAGAACGGCAAGGACATGTCCTCGCCGGTGCCCGTTAAGATGGAGCCGCCGCCGGCGGAGGCGCGGGCGGAGAACATCTGA
Protein Sequence
MSYGEPVLLFNQKNEVSLVLLLLNRFFDSHSKYVTAKLLENSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQNLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHTPHASHHIKEEVLPYPSITDGMSVPNAYGNVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYGERDVVAEITEMGPPKTPVSIAKNGKDMSSPVPVKMEPPPAEARAENI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01017665; iTF_01138883; iTF_00180388; iTF_00410212; iTF_00009924; iTF_01133645; iTF_01463181; iTF_00289551; iTF_00156178; iTF_00008821; iTF_00871221; iTF_00149302; iTF_01464088; iTF_00148409; iTF_00342138; iTF_00325307; iTF_00155231; iTF_01245860; iTF_01041669; iTF_00715732; iTF_01331366; iTF_01341062; iTF_01388390; iTF_01386638; iTF_01387536; iTF_01385625; iTF_00277287; iTF_01437895; iTF_00166852; iTF_00795622; iTF_01082360; iTF_00970329; iTF_00971155; iTF_01494984; iTF_00249640; iTF_00197299; iTF_01115636; iTF_00275177; iTF_00007937; iTF_00150401; iTF_00027682; iTF_00832834; iTF_00077411; iTF_01403363; iTF_00430567; iTF_00710123; iTF_00114863; iTF_00026771; iTF_01561944; iTF_00011866; iTF_00736539; iTF_00212353; iTF_01501027; iTF_00778692; iTF_00782565; iTF_00695398; iTF_00647919; iTF_01078127; iTF_01336752; iTF_00457937; iTF_01401202; iTF_00722963; iTF_00159750; iTF_01359639; iTF_01333656; iTF_00844249; iTF_00896697; iTF_00985913; iTF_00984952; iTF_01141593; iTF_01143036; iTF_01148031; iTF_00621148; iTF_01181822; iTF_00960096; iTF_00959340; iTF_00958608; iTF_01402656; iTF_00942731; iTF_00878796; iTF_00204291; iTF_00855806; iTF_00006221; iTF_01081515; iTF_00279050; iTF_00276205; iTF_00947821; iTF_00771023; iTF_00357347; iTF_01203174; iTF_01204809; iTF_00358446; iTF_01205626; iTF_01203967; iTF_00318800; iTF_01490065; iTF_00236565; iTF_01453202; iTF_01452257; iTF_01451386; iTF_01016520; iTF_01564503; iTF_00323416; iTF_01148755; iTF_01145218; iTF_01140145; iTF_01143766; iTF_00112436; iTF_00775188; iTF_00247970; iTF_00777929; iTF_01080655; iTF_00419696; iTF_00255737; iTF_00780189; iTF_00247102; iTF_00774432; iTF_00781760; iTF_00072661; iTF_00720142; iTF_00287981; iTF_00673414; iTF_00642261; iTF_01018504; iTF_01156203; iTF_01153773; iTF_01280110; iTF_01125391; iTF_00035570; iTF_01124530; iTF_01154934; iTF_01158614; iTF_00922809; iTF_00409206; iTF_00772801; iTF_00657067; iTF_00656014; iTF_01072368; iTF_00654164; iTF_00411349; iTF_00659384; iTF_00957881; iTF_01334681; iTF_00198042; iTF_01503770; iTF_01495707; iTF_01494243; iTF_00290588; iTF_00428024; iTF_00960860; iTF_00074404; iTF_00448069; iTF_01282150; iTF_00075399; iTF_00364839; iTF_00076392; iTF_00751944; iTF_01071564; iTF_01502897; iTF_00347411; iTF_00382494; iTF_00683238; iTF_00284455; iTF_01020148; iTF_01176124; iTF_01142334; iTF_00012863;
90% Identity
iTF_01080655;
80% Identity
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