Murs003423.1
Basic Information
- Insect
- Megathymus ursus
- Gene Symbol
- bab1
- Assembly
- GCA_003671415.1
- Location
- PDGT01000018.1:3831262-3836222[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-17 1.2e-14 54.1 0.0 1 43 42 85 42 87 0.95 2 2 3.4 2.9e+03 -1.6 1.4 6 15 176 185 172 188 0.81
Sequence Information
- Coding Sequence
- atgatatttacaaCAGATAGCTACCAGTACCAACTGCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAGAGCCTGGTACATAATCTGCGCTTCCGCGAACGAGGCCCGCTTAAGTCTTGGCGTCCGGAGACCATGGCCGAGGCCATCTTTTCCGTGTTGAAGGAAGGACTCTCGCTGTCCCAGGCCGCGAGGAAGTACGACATCCCCTACCCGACATTCGTGCTCTACGCTAATCGAGTCCACAACATGTTGGGACCGAGCGCTGATGGAGGAGCAGATCTGAGGCCGAAGGGTCGCGGACGACCGCAGCGTATCCTGCTGGGCGTGTGGCCGGACGAGCACATCCGTGGCGTGATCCGCGCCGTCGTGTTCCGCGACACGCACGCCCATACTCCGCACCACATCAAGGAGGAGGTGCTCCCGTATCCCTCGATCACGGATGGACTGACGGTCGGCAACGCGTATGGACCGGTGGCGTGCGGCAACGGGCGTGAAGGCGGGGTGTCGCCGAACGCGGCCGCTGCTGCAGCAGTTGCCGCGGTGGCCCACGGCATTCGGCGACAGATGTGCAATATGGTAGTAGCAGCGCAGCGCCCTCCGGACCATCCACCGCACCTAGGGCTCCCACCGCTGCCGCTGCAGTCGCCTCGCTTGCCCTCACCGCTGTCCGCCGGCCTCGAATCGCCGCTGTGCTCGCCCCCTCCACCGGGACACGCACTCGAACCTCCCAAGCCCAACGACCCGTTCCGCCCCTTCGCTTCTCCACGACCCGGATACGGAGACCGCGACGCCGTCGCCGAGATCACAGATATGGGACCGCCGAAAACCCCCGTCGGCAAAAACGGCAAGGACATGTCGGCCGCCATGCCGGTTAAGATGGAGCTCCCTGGAGAAGCCCGCGCTGAGAACATCTGA
- Protein Sequence
- MIFTTDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAHTPHHIKEEVLPYPSITDGLTVGNAYGPVACGNGREGGVSPNAAAAAAVAAVAHGIRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPNDPFRPFASPRPGYGDRDAVAEITDMGPPKTPVGKNGKDMSAAMPVKMELPGEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- iTF_00971155;