Pmel026118.1
Basic Information
- Insect
- Pieris melete
- Gene Symbol
- bab1
- Assembly
- GCA_963693345.1
- Location
- CAVNZK010000367.1:1084596-1089108[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 1.8e-14 53.8 0.0 1 43 73 116 73 118 0.95 2 2 6 7.5e+03 -2.5 2.0 6 15 209 218 205 219 0.82
Sequence Information
- Coding Sequence
- ATGATGAATACTTCGATTAAAAAAAGCACTATTGTTGTGGACATGTCGGCGAAGATCCTTGAGAACTCCCATGCTTGGCTTGGCGCTTCCACATCGTCACTCGCAGtaGATAGCTACCAGTACCAGCTCCAGTCGATGTGGCAGAAGTGTTGGAACACCAATCAGAGCTTGGTGCACAACTTACGATTTCGCGAACGCGGCCCATTAAAGTCCTGGAGGCCAGAAACAATGGCGGAAGCAATCTTCTCTGTGCTGAAGGAGGGACTTTCTCTGTCACAAGCTGCAAGGAAATACGATATACCATACCCCACATTTGTCCTCTACGCAAATCGGGTCCACAATATGCTGGGACCCAGTGCTGATGGTGGTACAGATTTGAGACCAAAAGGTCGCGGTCGGCCGCAGCGCATCTTGCTAGGAGTGTGGCCCGATGAACACATTCGTGGCGTGATCCGAGCCGTAGTTTTCCGGGATTCACACGCTTCCCACACCGCTCATCACATCAAGGAAGAAGTGTTACCCGTCTATCCTCAAATCACGGATGGTATGACTGTGGGTCAGAGCCCCTACCCGGTACCCTGCGGCAACGGGCGCGAAGGAGGAGTGTCACCAAATGCTGCTGCAGCCGCTGCTGTGGCTGCAGTGGCTCATGGTCTACGACGTCAGATGTGCAACATGGTAGTGGCCGCACAAAGGCCGCCCGACCACCCGCCTCATCTAGGCCTACCCCCTCTACCGCTGCAGTCTCCACGCTTACCTTCACCGCTGTCTACCGGCTTAGAATCTCCTCTCTGCTCACCACCTCCTCCCGGGCACGCCCTCGAACCTCCAAAGCCAGCTGACCCTTTCCGCCCATTCGTATCGCCTAGACCAGACAGCCGTTATGGAGAACGAGACGTGGTTGCTGATATCACCGAAATGGGCCCACCGAAGACACCGATGACCGTGGCAAAGAATGGCAAAGACCTGTCCTCCCCGCTGCCGGTGAAAATGGAGGCGCCCCAGGCAGATGGGCGTGCTGAGAACATCTGA
- Protein Sequence
- MMNTSIKKSTIVVDMSAKILENSHAWLGASTSSLAVDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGTDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHASHTAHHIKEEVLPVYPQITDGMTVGQSPYPVPCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSTGLESPLCSPPPPGHALEPPKPADPFRPFVSPRPDSRYGERDVVADITEMGPPKTPMTVAKNGKDLSSPLPVKMEAPQADGRAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- iTF_01203174;