Cpun021618.2
Basic Information
- Insect
- Conogethes punctiferalis
- Gene Symbol
- bab1
- Assembly
- GCA_031163375.1
- Location
- CM062101.1:2201131-2221146[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 1.9e-14 53.7 0.0 1 43 96 139 96 141 0.95 2 2 7.8 7.6e+03 -2.6 2.0 6 15 231 240 227 241 0.82
Sequence Information
- Coding Sequence
- ATGCAAGCACGTTTAATAGCACTCATTAAGAATGTAGACTCGAATCAACACATATACGTTGATGGCTGGAAGAAGAGTAGGAATTGTTGTATTAGACGATTTGACGAAATTCATCGAGCGAAGCTACTGGAGAACTCCCACGCATGGCTGGGCGCGTCTACGTCATCTATCGCAGCAGACAGCTATCAATACCAGCTGCAGTCGATGTGGCAGAAATGCTGGAACACCAACCAGTCCTTGGTGCACAACCTGCGCTTCCGCGAGCGCGGCCCCCTCAAGTCCTGGCGGCCGGAGACAATGGCGGAGGCCATCTTCTCGGTCCTCAAGGAGGGCCTCTCCCTCTCGCAGGCGGCGCGGAAGTACGACATACCCTACCCGACCTTCGTACTCTACGCCAACAGAGTCCACAACATGCTCGGACCCAGCGCTGATGGCGGAGCAGATTTGAGGCCGAAGGGCCGCGGGCGGCCGCAGCGGATCCTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGGGTCATCCGCGCCGTCGTCTTCCGCGACACGCACGCCCCCCACCCGCCCCACCACATCAAGGAGGAGGTGCTCCCGTACCCCTCGATCACGGACGGGATCAACGTGCCGAACGCGTACGGCAACGTGTCGTGCGGCAACGGGCGCGAGGGCGGCGTGTCCCCGAACGCCGCGGCCGCCGCTGCGGTAGCCGCCGTGGCGCACGGACTGCGCCGGCAGATGTGCAACATGGTTGTGGCCGCGCAGCGTCCGCCCGACCACCCTCCACACCTCGGACTGCCACCGCTGCCGCTGCAATCGCCAAGGCTTCCGTCGCCGCTGTCCGCCGGCCTCGAGTCGCCTCTCTGCTCCCCGCCGCCGCCCGGCCACGCGCTCGAGCCGCCGAAGCCCGCCGACCCGTTCCGCCCGTTCGCCTCGCCCCGCCCCGACAGCCGCTACGGTGAGCGCGACGCGATCGCCGAGATAACCGAGATGGGACCGCCTAAGACGCCGGTGCCGATGGCGAAGAACGGCAAGGAGCTGTCGTCGCCGGTGCCGGTGAAGATGGAGCCGCCGGCggcggaggcgcgcgccgagcaCATGTGA
- Protein Sequence
- MQARLIALIKNVDSNQHIYVDGWKKSRNCCIRRFDEIHRAKLLENSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHPPHHIKEEVLPYPSITDGINVPNAYGNVSCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYGERDAIAEITEMGPPKTPVPMAKNGKELSSPVPVKMEPPAAEARAEHM*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -