Dpha000456.2
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- bab1
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000001.1:7780840-7784288[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-17 1.3e-14 54.0 0.0 1 43 43 86 43 88 0.95 2 2 6.6 4e+03 -1.9 1.6 6 15 178 187 174 189 0.83
Sequence Information
- Coding Sequence
- ATGAGGCGGGCTAGAGcAGATAGCTACCAGTACCAGCTGCAATCCATGTGGCAAAAGTGCTGGAACACCAACCAGAGCCTCGTTCACAACCTGCGTTTCCGCGAGCGTGGCCCTCTTAAATCCTGGCGTCCAGAAACCATGGCCGAGGCTATATTCTCCGTTTTAAAAGAAGGACTTTCTCTCTCTCAAGCTGCCAGGAAATATGACATACCGTACCCGACCTTCGTGCTGTATGCGAACAGAGTGCACAACATGCTCGGCCCCAGCAGTGACGGCGGTGCAGATTTAAGACCAAAAGGTCGTGGACGGCCACAGCGCATCCTACTGGGCGTATGGCCCGACGAACACATCCGCGGAGTCATCCGCGCCGTTGTCTTCCGCGACTCGCACACACCGCACGCCGCCCACCACATCAAGGAGGAAGTGCTCCCCGTCTATCCTCCCATCACGGACGGCATGAGTGTCCAGAACGCATACCCAGTGGCGTGCGGCAACGGGCGCGAAGGTGGGGTGTCGCCCaacgccgccgccgccgctgcCGTGGCTGCGGTTGCGCACGGTCTGCGCCGACAAATGTGCAACATGGTGGTGGCCGCCCAGCGCCCACCGGACCACCCGCCACACCTAGGCCTACCACCGCTTCCGCTGCAATCGCCGCGCCTACCCTCTCCGCTTTCTGCGGGCCTGGAGTCTCCGCTGTGCTCGCCGCCTCCACCCGGACACGCCCTCGAGCCGCCCAAGCCCGCTGACCCCTTCCGACCTTTTGCTTCACCACGACCGGACAGCCGCTATGGAGAACGTGACGTTGTTTCTGAAATAACCGAAATGGGCCCGCCTAAGACACCAGTATCGATCGCCAAGAACGGCAAGGATCTGACGACTCCACTCCCGGTGAAAATGGAGCTGCCTCCGGCAGAGGCTCGGGCGGAGAACATTTGA
- Protein Sequence
- MRRARADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHTPHAAHHIKEEVLPVYPPITDGMSVQNAYPVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYGERDVVSEITEMGPPKTPVSIAKNGKDLTTPLPVKMELPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- iTF_01181822;