Etru000270.1
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- bab1
- Assembly
- GCA_949315975.1
- Location
- OX438825.1:2500628-2520244[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-17 1.7e-14 53.9 0.0 1 43 71 114 71 116 0.95
Sequence Information
- Coding Sequence
- ATGTCAACTGAGAAAAACGCAACCAAAGTGCGCGTTCCATTCGCTAAACTCCTAGAGAGCTCCCACGCCTGGCTCGGCGCCTCGACTTCGTCCATCGCAGCAGACAGCTACCAGTACCAGCTTCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAGAGCCTGGTGCATAACTTGCGCTTCCGAGAGCGCGGGCCGCTCAAGTCCTGGCGGCCAGAGACCATGGCGGAGGCCATCTTCTCGGTGCTGAAGGAGGGGCTGTCCCTCTCGCAAGCCGCTAGGAAATATGATATACCGTACCCGACGTTCGTGCTGTACGCCAACCGGGTCCACAACATGCTCGGCCCCAGCGCTGATGGCGGAGCAGATCTCAGACCGAAGGGGCGCGGGAGGCCGCAGCGCATCCTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTCATCCGCGCCGTCGTGTTCCGCGACACGCACGCGACGCACGTGCCGCACCACATCAAGGAGGAGGTCTTGCCATACCCCTCTATCACGGACGGTATCAACGTGCCCCCTGCGTACGGAGCCCCGGCGTGCGGCAACGGGCGCGAGGGCGGTGTGTCgcccagcgccgccgccgccgccgccgtggcCGCCGTGGCGCACGGCCTGCGCCGCCAGATGTGCAACATGGTGGTGGCGGCGCAGCGCCCGCCCGACCACCCGCCGCACCTCGGCctgccgccgctgccgctgcaGTCGCCACGCATGTCGCCGCTCTCCGCGGGGCTAGAGTCGCCGCTCTGCTCGCCACCGCCCCCTGGACACGCCCTCGAACCGCCCAAGACCGCCGACCCGTTCCGCCCCTTCGCCTCCCCCCGCCCGGATAGCCGCTACGGCGAGCGCGACATCATCTCTGAGATTACTGAAATGGGCCCACCGAAGACCCCGGTGTCTGCCAAGAACGGCAAGGAGCCGTCGACGCCCGTGCCCGTGGCGATGGAGCCGCCGCCCGCCGAGGCACGCGCTGAGAGCATCTGA
- Protein Sequence
- MSTEKNATKVRVPFAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHATHVPHHIKEEVLPYPSITDGINVPPAYGAPACGNGREGGVSPSAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRMSPLSAGLESPLCSPPPPGHALEPPKTADPFRPFASPRPDSRYGERDIISEITEMGPPKTPVSAKNGKEPSTPVPVAMEPPPAEARAESI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -