Bmor015426.2
Basic Information
- Insect
- Bombyx mori
- Gene Symbol
- bab1
- Assembly
- GCA_027497135.1
- Location
- CP114969.1:17513357-17516260[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.2e-14 53.8 0.0 1 43 95 138 95 140 0.95 2 2 5.1 5.1e+03 -2.7 1.6 6 15 232 241 231 242 0.86
Sequence Information
- Coding Sequence
- ATGTTTGTGCACTTTCAAATTCTCAGTGAAGGTATCTTGAACAATCGTGGCTTAGTCCATATGGAAATAATGTATTTAGATTCAAATTTTAGAATAACGTGGCCTTCATCATGCCCGTGTACTATCATATGTCTCGAGGAGACTGGTATTAAGGGAGAGAAGTGGAAATATTGGCACAGCTACCAATACCAGCTGCAGTCGATGTGGCAAAAATGCTGGAACACCAACCAGAACTTGGTACACAACCTGCGTTTCCGCGAACGCGGTCCTCTCAAGTCCTGGCGGCCAGAAACTATGGCTGAGGCCATTTTCTCTGTGCTGAAGGAGGGCTTGTCTCTCTCCCAAGCGGCTAGGAAGTACGACATCCCGTACCCGACGTTCGTGCTGTATGCCAACCGCGTCCATAACATGCTCGGACCCAGCGCCGATGGTGGAGCAGATCTGCGACCAAAAGGACGCGGTCGCCCACAAAGGATTCTGCTGGGCGTCTGGCCCGATGAACATATCCGTGGAGTTATCCGCGCGGTCGTATTCCGCGACACGCAGGCACCGCACGCTAATCCTCATCATCTCCGCGAACTAGAGCTGCCGACGTACCCTGCCATCACGGATGGATCACCGACACCGGCTGCATATACCGCGGTGGGGGTCGGCAATGGACGCGAAGAGCGCGTGTCTCCAAATGTTGCCGCCGCCGCCGCCGTAGCCGCCGTGGCCCATGGGCTGCGCCGTCAGATGTGCAACATGGTGGTGGCGGCGCAGCGCCCACAGGACCAGCCGCCACTCGGCCTGCCTCCGCTGCCAATGCACTCACCGCGGCTGCCGTCACCGCTCTCCGCGAGCCTGGAATCACCAATGTGCTCCCCGAGCCAGACGCTCGAGGCCGCGAAGCCCGCCGATCCATTCCGCCCGTTCATATCGCCCCGACCTGAAAGTCGCTATGCAGAACGCGACATTATCCCGGAAATGACCGATATGGGACCGCCAAAGACACCGGTGCCGACTCGGAACGGACAGGCCGCCGGTGCTATGGAGCTGGATGGCTCCGATGACCGTTCCGACATGATATGA
- Protein Sequence
- MFVHFQILSEGILNNRGLVHMEIMYLDSNFRITWPSSCPCTIICLEETGIKGEKWKYWHSYQYQLQSMWQKCWNTNQNLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTQAPHANPHHLRELELPTYPAITDGSPTPAAYTAVGVGNGREERVSPNVAAAAAVAAVAHGLRRQMCNMVVAAQRPQDQPPLGLPPLPMHSPRLPSPLSASLESPMCSPSQTLEAAKPADPFRPFISPRPESRYAERDIIPEMTDMGPPKTPVPTRNGQAAGAMELDGSDDRSDMI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01490065;
- 80% Identity
- -