Hcom017088.1
Basic Information
- Insect
- Hesperia comma
- Gene Symbol
- bab1
- Assembly
- GCA_905404135.1
- Location
- FR990012.1:3150127-3152819[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 1.5e-14 54.2 0.0 1 43 28 71 28 73 0.95 2 2 4.3 3.7e+03 -1.5 1.4 6 15 162 171 158 174 0.81
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAACCAGAGTCTGGTCCACAACCTGCGCTTCCGCGAGCGTGGTCCTCTCAAGTCCTGGAGGCCAGAGACGATGGCGGAGGCCATCTTCTCCGTGCTGAAGGAAGGCCTCTCGCTGTCCCAGGCCGCGAGGAAATACGACATCCCATACCCAACGTTCGTGCTGTACGCCAACCGAGTCCACAACATGCTGGGACCCAGCGCTGATGGCGGAGCAGATCTGAGACCGAAGGGACGCGGGCGGCCGCAGCGGATCCTGCTGGGCGTGTGGCCGGACGAGCACATCCGCGGCGTCATCCGCGCCGTCGTGTTCCGCGACACGCACGCGCACACCGCGCACCACATCAAGGAGGAGGTGCTGCCGTATCCCTCGATCACGGACGGGCTGACCGTCGGCAACGCGTACGGACCGGTGGCGTGCGGCAACGGGCGCGAGGGCGGCGTGTCGCCCAACGCGGCGGCGGCGGCCGCGGTGGCCGCGGTGGCGCACGGCATCCGCCGGCAGATGTGCAACATGGTGGTGGCCGCGCAGCGCCCGCCCGACCACCCGCCGCACCTGGGCCTGCCGCCGCTGCCGCTGCAGTCGCCGCGCCTGCCCTCGCCGCTCTCCGCCGGCCTCGAGTCCCCGCTCTGCTCGCCCCCTCCGCCCGGACACGCGCTCGAGCCCCCCAAGCCTTCCGACCCGTTCCGCCCCTTCGCTTCCCCCCGGCCGGGGTACGGCGAGCGCGACGTCGTCGCCGAAATCACCGACATGGGCCCCCCGAAGACTCCCGTCGGCAAGAACGGCAAGGACATGTCGGCCGCGATGCCGGTCAAGATGGAGCTGCCCGGGGAGGCCCGCACGGAGAACATCTGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAHTAHHIKEEVLPYPSITDGLTVGNAYGPVACGNGREGGVSPNAAAAAAVAAVAHGIRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPSDPFRPFASPRPGYGERDVVAEITDMGPPKTPVGKNGKDMSAAMPVKMELPGEARTENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -