Zces005976.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- bab1
- Assembly
- GCA_012273895.1
- Location
- CM022623.1:6096768-6100230[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-18 9.3e-15 53.9 0.0 1 43 58 101 58 103 0.95 2 2 3.3 3.8e+03 -2.5 2.0 6 15 194 203 190 204 0.82
Sequence Information
- Coding Sequence
- ATGGCTAAAATACTTGAAAATTCGCACGCCTGGCTTGGAGCATCCACATCGTCTTTGGCAGtAGATAGCTACCAGTACCAGCTGCAATCCATGTGGCAGAAATGCTGGAACACCAACCAGAGCCTGGTCCATAACCTGCGGTTCCGCGAGCGCGGCCCTCTGAAGTCCTGGCGTCCAGAAACCATGGCGGAGGCTATCTTCTCAGTGCTCAAGGAGGGTCTCTCTCTGTCGCAAGCTGCAAGGAAATACGACATACCATACCCAACGTTTGTTCTCTACGCTAACCGGGTCCACAATATGCTGGGGCCCAGCGCCGACGGTGGTACAGATTTGAGGCCAAAAGGTCGAGGTCGGCCTCAACGCATCTTGCTAGGAGTGTGGCCGGACGACCACATTCGTGGCGTGATCCGGGCGGTCGTCTTCCGCGACTCGCAAGCTTCCCACACCGCCCATCACATCAAGGAGGAGGTGCTCCCAGTCTATCCACAGATCACGGATGTAATGACGGTGGGGCAAAGTCCATATCCGGTTCCTTGCGGCAACGGGCGTGAGGGTGGCGTGTCGCCCAACGCAGCTGCCGCCGCAGCCGTGGCCGCCGTGGCGCACGGGTTGCGCAGGCAGATGTGCAACATGGTGGTCGCCGCGCAGAGGCCGCCCGACCACCCGCCACACCTGGGCCTGCCGCCTCTGCCCCTGCAGTCCCCGCGTTTGCCCTCTCCCCTCTCGACCGGCTTGGAGTCCCCGCTGTGCTCGCCTCCTCCCCCTGGCCACGCTCTGGAGCCGCCGAAGCCCACCGACCCGTTCCGCCCTTTCGTCTCTCCCCGCCCGGACAGCCGCTATGGAGAACGCGACGTCGTCGCTGAGATCACTGAGATGGGCCCACCCAAAACTCCGGTGTCGGTCGGCAAGAACGGCAAGGAGATGTCGTCACCGCTGCCCGTGAAGATGGAGGCGGCGCAGGCGGAAGCGCGCGCGGAGAACATCTGA
- Protein Sequence
- MAKILENSHAWLGASTSSLAVDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGTDLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRDSQASHTAHHIKEEVLPVYPQITDVMTVGQSPYPVPCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSTGLESPLCSPPPPGHALEPPKPTDPFRPFVSPRPDSRYGERDVVAEITEMGPPKTPVSVGKNGKEMSSPLPVKMEAAQAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -