Enis014046.2
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- bab1
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000057.1:4263142-4284976[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-18 1.6e-14 53.8 0.0 1 43 89 132 89 134 0.95 2 2 3.1 6.5e+03 -2.6 2.0 6 15 224 233 220 234 0.82
Sequence Information
- Coding Sequence
- ATGGGCGGGGAGCGCGCGCGGACACGAGCGGAGCGGGCGGCGGCGGGCCGGGTTTCACAGGCGCCGCGCTTCTTCCCCGCTCCTCCTTCTCATTACGCTAAATTACTGGAGAGTTCGCACGCGTGGCTCGGGGCATCCACATCTTCTATCGCAGCAGACAGTTACCAGTACCAACTTCAGTCGATGTGGCAGAAGTGCTGGAACACGAACCAGAGCCTGGTACACAACCTACGATTCCGCGAGCGCGGGCCGCTCAAGTCCTGGCGGCCGGAGACCATGGCCGAGGCCATCTTCTCCGTGCTGAAGGAGGGGCTCTCGCTGTCGCAGGCGGCGCGGAAGTACGACATCCCCTACCCGACCTTCGTGCTGTACGCCAACCGCGTGCACAACATGCTGGGGCCCAGTGCCGACGGCGGCGCAGATTTGAGGCCCAAGGGGCGCGGGCGGCCGCAGCGCATCCTGCTGGGCGTGTGGCCCGACGAGCACATTCGCGGCGTCATCCGAGCCGTGGTCTTCCGCGACACCCACGCGCACACCGCGCACCACATCAAGGAGGAGACGTTGCCCGTCTATCCCGCTATTACGGATGGCATCACGGTGCCAAATGCTTACGGGCCTGTGGCGTGCGGTAACGGTCGGGAGGGGGGCGTGTCCCCCAACGCAGCTGCCGCAGCCGCCGTAGCCGCCGTGGCCCACGGCTTACGACGGCAGATGTGCAACATGGTGGTGGCGGCGCAGCGGCCGCCTGACCATCCGGCTCACCTGGGCTTGCCGCCGCTGCCGCTGCAGTCACCACGCCTGCCGTCGCCGCTCTCGGCCGGGCTCGAGTCACCCCTGTGCTCCCCGCCCCCGCCCGGGCACGCCCTGGAACCTCCAAAGCCATCCGATCCATTCCGACCCTTCGCTTCGCCAAGACCTGACAGCCGCTACGACCGCGACGTCGCAGAGATTACAGAAATGGGTCCCCCGAAAACGCCGATTCCGATGGCGAAGAACGGCAAGGAACTGTCGTCGCCAGTGCCGGTGAAGATGGAGCCGCCACCCGCAGAGGCGCGCGCGGAGAACATCTGA
- Protein Sequence
- MGGERARTRAERAAAGRVSQAPRFFPAPPSHYAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAHTAHHIKEETLPVYPAITDGITVPNAYGPVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPAHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPSDPFRPFASPRPDSRYDRDVAEITEMGPPKTPIPMAKNGKELSSPVPVKMEPPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- iTF_00656014;