Ainn006078.2
Basic Information
- Insect
- Anarsia innoxiella
- Gene Symbol
- bab1
- Assembly
- GCA_947563765.1
- Location
- OX387390.1:9824232-9840653[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 1.4e-14 53.9 0.0 1 43 64 107 64 109 0.95 2 2 6.1 5.6e+03 -2.5 2.0 6 15 200 209 196 210 0.82
Sequence Information
- Coding Sequence
- ATGGACTGGTTCCGGGCGCAGGCAAAGCTACTGGAGAACTCTCACGCGTGGCTCGGAGCATCCACATCTTCAATTGCAGCAGACAGCTACCAATACCAGCTTCAATCGATGTGGCAGAAGTGCTGGAATACAAATCAAAGTCTTGTCCACAATTTGCGTTTCCGTGAACGCGGGCCTTTGAAGTCGTGGCGGCCGGAGACCATGGCCGAAGCCATTTTCTCGGTACTGAAGGAAGGGCTGTCACTATCTCAAGCTGCGAGGAAATATGACATTCCGTACCCGACGTTCGTGTTGTACGCCAACCGAGTCCACAACATGCTGGGGCCCAGCGCTGATGGCGGCGCAGATTTGAGGCCCAAGGGTCGAGGCAGGCCGCAGCGGATCTTGCTGGGCGTTTGGCCAGATGAACACATTCGGGGCGTCATCCGCGCCGTTGTATTCCGCGACACTCACGCTCCCCACGCCTCGCATCACATCAAGGAAGAGGTGCTGCCCGTGTATCCAGCTATCACGGATGGAATGGGAGTGCAAAACGCCTACGGAAACGTTGCCTGTGGAAACGGTCGGGAGGGCGGAGTGTCGCCCAACGCGGCCGCTGCCGCCGCCGTGGCCGCGGTGGCGCACGGGCTGCGGCGGCAAATGTGCAACATGGTAGTAGCGGCGCAGCGGCCGCCCGACCACCCGCCGCACCTCGGCCTGCCGCCGTTGCCTCTGCAGTCGCCACGGTTGCCATCACCGCTCTCAGCCGGCCTCGAGTCGCCTCTTTGCTCGCCTCCTCCTCCTGGTCATGCGTTGGAGCCGCCGAAACCCACCGACCCCTTTCGCCCGTTCGCTTCACCCCGCCCGGATAGTCGTTACAGCGAGCGCGACATGGTTGCCGAAATAACTGATATGGGGCCACCAAAGACCCCCGTTCCAACGAAAAATGGAAAAGATCCGCTATCGTCTCCAGTGCCAGTGAAAATGGAGTCCCCGCCGGTAGAAGCTCGTACGGAGAACATCTGA
- Protein Sequence
- MDWFRAQAKLLENSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHASHHIKEEVLPVYPAITDGMGVQNAYGNVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPTDPFRPFASPRPDSRYSERDMVAEITDMGPPKTPVPTKNGKDPLSSPVPVKMESPPVEARTENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -