Klyc008346.2
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- bab1
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000006.1:562172-572705[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-17 2.1e-14 53.9 0.0 1 43 61 104 61 106 0.95
Sequence Information
- Coding Sequence
- ATGTATTCCATGGCAAAGCTGCTGGAAAATTCCCACGCCTGGCTCGGCGCATCTACTTCCTCCATTGCAGCAGACAGCTACCAGTACCAGCTTCAGTCGATGTGGCAGAAGTGCTGGAACACGAACCAGAGCCTGGTGCACAACCTGCGGTTCCGCGAGCGCGGCCCGCTCAAGTCCTGGCGGCCGGAGACCATGGCCGAGGCCATCTTCTCCGTGCTGAAGGAGGGTCTGTCGCTGTCGCAGGCCGCGCGGAAGTACGACATACCCTACCCGACGTTCGTGCTCTACGCCAACCGGGTCCACAACATGCTGGGCCCCAGCGCCGACGGCGGAGCGGATTTGCGGCCGAAGGGTCGCGGGCGGCCGCAGCGGATCCTCCTCGGCGTGTGGCCCGACGAGCACATCCGCGGCGTGATACGCGCCGTCGTGTTCCGCGACACGCATGCGCCGCACGCTGCGCACGCGCACACCCCGCACCACATCAAGGAGGAGGTGCTGCCTGTTTACCCTGCCATCACGGACGGATTGGGGGTACAAAACACGTATGGGAACATGGCATGCGGCAACGGTCGCGAAGGCGGCGTGTCGCCCAACGCGGCTGCGGCGGCGGCCGTGGCGGCCGTGGCGCACGGGCTGCGGCGGCAGATGTGCAACATGGTGGTGGCGGCGCAGCGGCCCTCCGACCACCCGCAGCACCTGGGCCTGCCCCCGCACCCGCTGCAGTCCCCGCGCCTGCCCTCGCCGCTCTCTGCCGGGCTCGAGTCGCCGCTCTGCTCGCCTCCGCCTCCCGGACACGCTCTCGAGCCGCCCAAACCAGCCGATCCCTTCCGCCCCTTCGCCTCGCCTCGCCCGGATAGCCGCTACAGTGACCGCGACGTGGTCTCCGAGATAACCGACATGGGACCCCCGAAAACTCCCGTGCCTGTTGCTAAAAACGGCAAGGACCCGATGTCGTCGCCGGTGCCGGTGAAGATGGAGCCCCCGCCGTTGGAAGCGCGGGCGGAGAACATCTGA
- Protein Sequence
- MYSMAKLLENSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHAAHAHTPHHIKEEVLPVYPAITDGLGVQNTYGNMACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPSDHPQHLGLPPHPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYSDRDVVSEITDMGPPKTPVPVAKNGKDPMSSPVPVKMEPPPLEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01336752;
- 80% Identity
- -