Mmes003579.2
Basic Information
- Insect
- Mechanitis messenoides
- Gene Symbol
- bab1
- Assembly
- GCA_959347415.1
- Location
- OY365760.1:1478939-1481478[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.7e-14 53.9 0.0 1 43 64 107 64 109 0.95 2 2 5.1 6.9e+03 -2.5 2.0 6 15 199 208 195 209 0.82
Sequence Information
- Coding Sequence
- atgAAAGCAAgacttttcaaaacaaaaactgtCGAAGTTATAAcaccaaatatattaacactCGGCTTCTCAATTCCAGCAGATAGCTATCAGTATCAGCTGCAGTCGATGTGGCAGAAGTGCTGGAACACTAACCAGAGCCTGGTGCACAACCTGCGGTTCCGTGAGCGTGGGCCCTTGAAGTCCTGGCGTCCAGAAACTATGGCAGAGGCTATTTTCTCTGTGCTGAAAGAGGGGCTGTCCCTGTCTCAGGCTGCAAGAAAATACGACATCCCCTACCCGACATTCGTGCTGTACGCTAACCGGGTCCATAACATGCTGGGTCCCAGCGCTGACGGCGGTGCAGATTTGAGACCAAAAGGTCGCGGTCGGCCGCAGCGCATACTGCTGGGCGTATGGCCGGAAGAGCACATCCGAGGAGTCATCCGCGCGGTCGTGTTCCGTGACTCACACACGCCGCACTCGACACACCACATCAAGGAGGAGGTTCTTCCCGTCTATCCCTCTATCACGGATGGCATGACTGTTCAGAACGCCTATCCCGTGTCGTGCGGCAATGGTCGCGAGGGTGGCGTGTCTCCAAACGCTGCAGCGGCGGCCGCCGTCGCCGCCGTGGCGCACGGCCTGCGACGTCAGATGTGCAACATGGTGGTGGCAGCTCAGAGACCACCCGACCACCCGCCGCATCTCGGCCTTCCTCCGCTGCCTCTCCAGTCTCCTCGAATGCCTTCTCCACTCTCAGCTGGATTAGAGTCTCCACTCTGCTCGCCTCCGCCGCCCGGATTAGCTCTCGAACCTCCGAAGCCCGCCGATCCATTCCGCCCGTTCGCTTCTCCACGTCCTGACAGCCGTTACAGCGAGCGCGATGTAGTCGCTGAAATTACCGAGATGGGACCGCCTAAAACCCCGGCTTCACTTGCCAAAAATGGAAAGGATATGTCGATGCCTATGCCCGTGAAGATGGAGCCGCCTCCTGCGGAGGCTAGAGCTGAGAACATCTGA
- Protein Sequence
- MKARLFKTKTVEVITPNILTLGFSIPADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPEEHIRGVIRAVVFRDSHTPHSTHHIKEEVLPVYPSITDGMTVQNAYPVSCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRMPSPLSAGLESPLCSPPPPGLALEPPKPADPFRPFASPRPDSRYSERDVVAEITEMGPPKTPASLAKNGKDMSMPMPVKMEPPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -